Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1111
         (564 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    31   0.026
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.7  
AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.       23   6.9  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   9.1  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   9.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   9.1  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 31.1 bits (67), Expect = 0.026
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -3

Query: 547 SGVRGVPPSQGEAPQ*TPPSR*GRYRSCRTDPPRRPSPAGMCRIW 413
           + +R +PPS+   P+   P   GR+ SCR+ P RR S +     W
Sbjct: 245 ASIRKIPPSRRN-PRRRSPRSGGRWPSCRSPPARRRSRSTRPTSW 288



 Score = 27.5 bits (58), Expect = 0.32
 Identities = 17/45 (37%), Positives = 19/45 (42%)
 Frame = +1

Query: 52  RISPGRETPDRNLPHYGPRFPPKGSKGAEPEFRSPRVKQLWDRWR 186
           +I P R  P R  P  G R+P   S  A    RS R    W R R
Sbjct: 249 KIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTS-WPRSR 292


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 208 ERQRRLHERLAHLKELQR 261
           E  R+LH+R  H+K+LQ+
Sbjct: 741 EMTRKLHQRQQHMKKLQQ 758


>AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.
          Length = 101

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 510 RRNELLPVDEAATVPVEQIRHGAHLQPG 427
           RRN   P     T+P+++ R G  ++ G
Sbjct: 13  RRNRTAPARNYDTIPIDRWRVGNRMKEG 40


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 265 SNFSWDDWRKRFLKFMNHKK 324
           S + W+D RK+F     HKK
Sbjct: 167 SAWEWNDERKQFYLHQFHKK 186


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = -1

Query: 525 PVRAKRRNELLPVDEAATVPVEQIRHGAHLQPGCVEFGVD 406
           P + +  N  L  D    +P+  I H A + P    F  D
Sbjct: 386 PYKVEGANVSLEPDTMLMIPIYAIHHDASIYPDPERFDPD 425


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 222 PPLALPGEQPHVAPPVP 172
           PP A+PG QP + P  P
Sbjct: 233 PPGAVPGMQPGMQPRPP 249


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 227 CSLRWRSQASSHTLR 183
           C LRW S   +H LR
Sbjct: 2   CGLRWTSSHRAHELR 16


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,605
Number of Sequences: 2352
Number of extensions: 12523
Number of successful extensions: 58
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)