Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1110
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-356|AAF45746.1|   96|Drosophila melanogaster CG17777-PA...    34   0.13 
BT010220-1|AAQ23538.1|  277|Drosophila melanogaster RH05666p pro...    34   0.17 
AY061007-1|AAL28555.1|  277|Drosophila melanogaster HL02234p pro...    34   0.17 
AE014134-2434|AAF53359.1|  277|Drosophila melanogaster CG16884-P...    34   0.17 
AY069544-1|AAL39689.1|  328|Drosophila melanogaster LD27203p pro...    32   0.53 
AE013599-2451|AAF57876.1|  328|Drosophila melanogaster CG30101-P...    32   0.53 
AY128449-1|AAM75042.1|  506|Drosophila melanogaster LD43863p pro...    31   0.93 
AE014134-1246|AAF52491.1|  506|Drosophila melanogaster CG4497-PA...    31   0.93 
AY128487-1|AAM75080.1|  170|Drosophila melanogaster RE73921p pro...    29   6.6  
AE014298-2527|AAF48701.1|  170|Drosophila melanogaster CG5010-PA...    29   6.6  
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    28   8.7  

>AE014298-356|AAF45746.1|   96|Drosophila melanogaster CG17777-PA
           protein.
          Length = 96

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +1

Query: 88  PKAVEEKKQDKRGIYDIG-SYGGH 156
           P AV+EKK +KRGIY  G  YGG+
Sbjct: 19  PSAVDEKKTEKRGIYGFGHGYGGY 42


>BT010220-1|AAQ23538.1|  277|Drosophila melanogaster RH05666p
           protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +1

Query: 19  MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 156
           MK  + L A L   A A + +G  K   EKK DKRG+ D+G   GH
Sbjct: 1   MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45


>AY061007-1|AAL28555.1|  277|Drosophila melanogaster HL02234p
           protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +1

Query: 19  MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 156
           MK  + L A L   A A + +G  K   EKK DKRG+ D+G   GH
Sbjct: 1   MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45


>AE014134-2434|AAF53359.1|  277|Drosophila melanogaster CG16884-PA
           protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +1

Query: 19  MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 156
           MK  + L A L   A A + +G  K   EKK DKRG+ D+G   GH
Sbjct: 1   MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45


>AY069544-1|AAL39689.1|  328|Drosophila melanogaster LD27203p
           protein.
          Length = 328

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 20/61 (32%), Positives = 21/61 (34%)
 Frame = +1

Query: 427 HVPYTXXXXXXXXXXXXXXXXXTVEKKVPFXXXXXXXXXXXXXXXXXXXXKVPYEVKVHV 606
           HVPYT                  VEKKVP                     K+PYEVKV V
Sbjct: 72  HVPYTVEKKIPYEVKVDVPQPYIVEKKVPVHVKEYVKVPVHVPKPYEVIKKIPYEVKVPV 131

Query: 607 D 609
           D
Sbjct: 132 D 132


>AE013599-2451|AAF57876.1|  328|Drosophila melanogaster CG30101-PA
           protein.
          Length = 328

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 20/61 (32%), Positives = 21/61 (34%)
 Frame = +1

Query: 427 HVPYTXXXXXXXXXXXXXXXXXTVEKKVPFXXXXXXXXXXXXXXXXXXXXKVPYEVKVHV 606
           HVPYT                  VEKKVP                     K+PYEVKV V
Sbjct: 72  HVPYTVEKKIPYEVKVDVPQPYIVEKKVPVHVKEYVKVPVHVPKPYEVIKKIPYEVKVPV 131

Query: 607 D 609
           D
Sbjct: 132 D 132


>AY128449-1|AAM75042.1|  506|Drosophila melanogaster LD43863p
           protein.
          Length = 506

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = +2

Query: 431 SPIPSRRKYPMR*KCPYLS--PT---PLKRKFPLPSRNTSNTQYTYLSPTPLKRKYLMKS 595
           SP P+RR +  R     ++  P+   P+KRKF L    T  + ++  SP P+K K   +S
Sbjct: 233 SPSPTRRTFATRRSMSPIAMRPSQLGPVKRKFELDDNPTQGSNWSVYSPPPVK-KIFTES 291

Query: 596 RST 604
           R +
Sbjct: 292 RGS 294


>AE014134-1246|AAF52491.1|  506|Drosophila melanogaster CG4497-PA
           protein.
          Length = 506

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = +2

Query: 431 SPIPSRRKYPMR*KCPYLS--PT---PLKRKFPLPSRNTSNTQYTYLSPTPLKRKYLMKS 595
           SP P+RR +  R     ++  P+   P+KRKF L    T  + ++  SP P+K K   +S
Sbjct: 233 SPSPTRRTFATRRSMSPIAMRPSQLGPVKRKFELDDNPTQGSNWSVYSPPPVK-KIFTES 291

Query: 596 RST 604
           R +
Sbjct: 292 RGS 294


>AY128487-1|AAM75080.1|  170|Drosophila melanogaster RE73921p
           protein.
          Length = 170

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 416 QSRNTSPIPS-RRKYPMR*KCPYLSPTPLKRKFPLPS 523
           + R+ SP PS RR  P++ + P  +P P++ + P P+
Sbjct: 4   RGRSASPPPSTRRTAPVQARAPAPAPAPVQTRAPAPA 40


>AE014298-2527|AAF48701.1|  170|Drosophila melanogaster CG5010-PA
           protein.
          Length = 170

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 416 QSRNTSPIPS-RRKYPMR*KCPYLSPTPLKRKFPLPS 523
           + R+ SP PS RR  P++ + P  +P P++ + P P+
Sbjct: 4   RGRSASPPPSTRRTAPVQARAPAPAPAPVQTRAPAPA 40


>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1830

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = -1

Query: 202 HSFRDRRSLHRYLRNYVLHKILCHRCPFCLVSSLRLPSVCLSPPWQRQPRPT 47
           H  RD  S+H        H  L HR P     +    S   SPP Q+ PRP+
Sbjct: 472 HQLRDCTSMHSCFTCKGRHHTLLHRSP----PNSENASSSTSPPTQQLPRPS 519


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.315    0.135    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,410,125
Number of Sequences: 53049
Number of extensions: 420318
Number of successful extensions: 985
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)