Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1108
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 57 1e-08
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 47 1e-05
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical pr... 37 0.014
AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical... 34 0.099
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 33 0.13
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 32 0.30
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z66511-4|CAA91316.1| 813|Caenorhabditis elegans Hypothetical pr... 30 1.2
U39742-9|AAK39194.1| 183|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 29 2.8
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 29 3.7
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 29 3.7
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.7
Z93384-4|CAE17903.1| 308|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z83109-3|CAB05515.2| 300|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 28 4.9
Z32683-15|CAE17933.2| 375|Caenorhabditis elegans Hypothetical p... 28 4.9
AL021492-15|CAE18000.1| 308|Caenorhabditis elegans Hypothetical... 28 4.9
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 28 4.9
Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81094-6|CAB03154.1| 666|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 27 8.6
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/65 (41%), Positives = 45/65 (69%)
Frame = +1
Query: 343 PMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKT 522
P E++ + A H++KA LG+G+L++PLAFK++GL +G I T+LI LIC + + +V
Sbjct: 44 PTENSLTPEQAFIHMVKAMLGTGLLSLPLAFKHSGLFLGLILTVLICLICLYCMRQVVFA 103
Query: 523 SQQLC 537
+ +C
Sbjct: 104 AHFVC 108
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +1
Query: 265 NYSSKIELA--YNGSREDMGPYVPANHRPMESNTSSFGALAHLLKASLGSGVLAMPLAFK 438
N S+ +L ++ + E +GP + + SS AL +L+K LG+G ++PLAFK
Sbjct: 43 NVQSEYQLVSKWDEAEEALGPQRKMSFIERKEKISSKFALINLMKGMLGAGCFSVPLAFK 102
Query: 439 NAGLLVGCIGTMLIGLICGHVIHILVKTSQQL 534
+G + G + +++G +C + LVK + L
Sbjct: 103 QSGYVSGLVIIVVLGFLCALCMIKLVKCAGYL 134
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 286 LAYNGSRED-MGPYVPANHRPMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGC 462
L GS + MG + R S T+ AL H++K +G+G+L++PLAFK++G+ +G
Sbjct: 15 LPLRGSHQPTMGEMFASRVRDSRSITAD-QALIHMIKVMMGTGMLSLPLAFKHSGIWLGL 73
Query: 463 IGTMLIGLIC 492
I I LIC
Sbjct: 74 ILLCFICLIC 83
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/58 (37%), Positives = 36/58 (62%)
Frame = +1
Query: 361 SSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQL 534
SS AL +L+K LG+G ++PLAFK +G + G + +++G +C + LVK + L
Sbjct: 22 SSKFALINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYL 79
>Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical
protein F13H10.3c protein.
Length = 583
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/45 (33%), Positives = 31/45 (68%)
Frame = +1
Query: 400 LGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQL 534
+G+ +LAMP A + AGL++G I + + IC + +I++++ ++L
Sbjct: 145 MGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRL 189
>Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical
protein F13H10.3b protein.
Length = 617
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/45 (33%), Positives = 31/45 (68%)
Frame = +1
Query: 400 LGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQL 534
+G+ +LAMP A + AGL++G I + + IC + +I++++ ++L
Sbjct: 179 MGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRL 223
>Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical
protein F13H10.3a protein.
Length = 615
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/45 (33%), Positives = 31/45 (68%)
Frame = +1
Query: 400 LGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQL 534
+G+ +LAMP A + AGL++G I + + IC + +I++++ ++L
Sbjct: 177 MGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRL 221
>AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical
protein Y18D10A.23 protein.
Length = 503
Score = 33.9 bits (74), Expect = 0.099
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 400 LGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGH 498
+G+G++++PLA +GL+ GC+ +L + G+
Sbjct: 53 MGAGMISLPLALGRSGLIAGCVLILLASIFSGY 85
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +1
Query: 349 ESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQ 528
++ S+ L + + +G G ++ ++FK AGL G ++G + + +H +V SQ
Sbjct: 60 KTGISATSGLINFICGMIGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQ 119
Query: 529 QL 534
L
Sbjct: 120 YL 121
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 349 ESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQ 528
++ S+ L + + +G G ++ ++FK AGL G +IG + + +H +V SQ
Sbjct: 32 KTGISATSGLINFVCGMMGPGCFSLAVSFKQAGLWGGFASVFIIGGLSLYSMHKIVNCSQ 91
Query: 529 QL 534
L
Sbjct: 92 FL 93
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 373 ALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVK 519
A ++ +G GV+AMP+AFK +GL +G + + + + + ++L K
Sbjct: 49 AAIFIIADMVGGGVVAMPVAFKLSGLPMGILIMLTVAVSFEYTGYLLGK 97
>Z66511-4|CAA91316.1| 813|Caenorhabditis elegans Hypothetical
protein F07A11.3 protein.
Length = 813
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 253 VMDDNYSSKIELAYNGSREDMGPYVPANHRPMESNTSSFGALAHLLKASLGSG 411
V+DD + IE Y + E +G +VP N + + N + HL+ S SG
Sbjct: 380 VIDDMLNDDIEDLYKFANETVGEFVP-NDKNCQVNMLALDIFFHLVAVSYASG 431
>U39742-9|AAK39194.1| 183|Caenorhabditis elegans Hypothetical
protein C25F6.1 protein.
Length = 183
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 141 KNKPQENIKIFGISNSFNLLLDIEDGEDEAISSSH 245
KNKP E ++ F I N++ ++E+G +IS+ H
Sbjct: 134 KNKPSELLRDFKIEALVNMVWNMEEGGSGSISTLH 168
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +1
Query: 346 MESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHIL 513
ME+ S + A+ + GSG++A+P A ++ G + G I +++ LI + +L
Sbjct: 1 MENGYSWYIAVIFTFGETAGSGLVALPSAMQSLGFMGGTITLIVMCLITYYTATLL 56
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 382 HLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHIL 513
+L +G VLAMP F+ G+L+ I L ++ H L
Sbjct: 57 NLANCIIGVSVLAMPYVFQQCGILLAAIMIALCAVLTKLTCHFL 100
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 209 RRWRRRSHQLLPFNLLWTITTARKLSWLTMDREKTWA 319
R W+ RSH L+W I A + L M ++T++
Sbjct: 127 RIWQTRSHAYAMITLVWVIAIAANILMLFMYEQQTYS 163
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 209 RRWRRRSHQLLPFNLLWTITTARKLSWLTMDREKTWA 319
R W+ RSH L+W I A + L M ++T++
Sbjct: 127 RIWQTRSHAYAMITLVWVIAIAANILMLFMYEQQTYS 163
>Z93384-4|CAE17903.1| 308|Caenorhabditis elegans Hypothetical
protein Y45F10D.15 protein.
Length = 308
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 117 YLCTFNHST*KKKTPTQQNCIRNSIVSKWPLFPPR 13
YL K KTPT+ IRN ++ WPL P R
Sbjct: 34 YLTVLYFRMRKIKTPTEMY-IRNLLIIAWPLIPIR 67
>Z83109-3|CAB05515.2| 300|Caenorhabditis elegans Hypothetical
protein F44G3.5 protein.
Length = 300
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -2
Query: 197 EIK*I*NSKYLDIFLRFVLHWHFTLYSTFALSITAHKKRKHQRNKIAFEIRLFQN 33
EI+ + NS + F+ L W L + +K+KHQ N+ + E LF N
Sbjct: 164 EIRLLINS-IISKFIHIFLPWTAVLLNLIVFVFLKLRKKKHQMNRKSLENSLFIN 217
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 117 TIECKVPMKNKPQENIKIFGISNSFNLLLDIEDGEDEA 230
+I CK+P + +PQ ++I G+ N+ I D ++A
Sbjct: 2302 SIMCKIPYEKRPQLQLEIVGMEGMDNVAKPIPDYFNDA 2339
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 117 TIECKVPMKNKPQENIKIFGISNSFNLLLDIEDGEDEA 230
+I CK+P + +PQ ++I G+ N+ I D ++A
Sbjct: 2302 SIMCKIPYEKRPQLQLEIVGMEGMDNVAKPIPDYFNDA 2339
>Z32683-15|CAE17933.2| 375|Caenorhabditis elegans Hypothetical
protein R07E5.17 protein.
Length = 375
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 96 CD*KCKGTIECKVPMKN-KPQENIKIFGISNSFNLLLDIE 212
C K KG +EC++P +N EN+ + GI S N + IE
Sbjct: 123 CFHKSKGNMECRIPFQNGNICENV-VVGIQKSGNSSIFIE 161
>AL021492-15|CAE18000.1| 308|Caenorhabditis elegans Hypothetical
protein Y45F10D.15 protein.
Length = 308
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 117 YLCTFNHST*KKKTPTQQNCIRNSIVSKWPLFPPR 13
YL K KTPT+ IRN ++ WPL P R
Sbjct: 34 YLTVLYFRMRKIKTPTEMY-IRNLLIIAWPLIPIR 67
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 117 TIECKVPMKNKPQENIKIFGISNSFNLLLDIEDGEDEA 230
+I CK+P + +PQ ++I G+ N+ I D ++A
Sbjct: 2302 SIMCKIPYEKRPQLQLEIVGMEGMDNVAKPIPDYFNDA 2339
>Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical
protein T23F6.3 protein.
Length = 291
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 575 CVSVA*SWFFTSTQSCCDVFTKICITCPQISPISIVPMQPTRRPAF 438
C + W +STQ C + + I P +SP+ I+ +RR +F
Sbjct: 232 CKTCVQRWHRSSTQPSCPLCRRRWIATPDVSPMEII---KSRRQSF 274
>Z81094-6|CAB03154.1| 666|Caenorhabditis elegans Hypothetical
protein F58G11.3a protein.
Length = 666
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 301 SREDMGPYVPANHRPMESNTSSFGALAHLLKA 396
S+ DM P++P NHR E T FG +KA
Sbjct: 393 SKSDMMPFIPKNHR--EIVTKRFGNAPSSVKA 422
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 296 MDREKTWARTCQQTIDLWSQTPRVSVPWPI 385
+D E+T A+ CQ T L S T P PI
Sbjct: 62 IDEEQTCAQACQATTTLSSTTASTVTPTPI 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,832,256
Number of Sequences: 27780
Number of extensions: 388026
Number of successful extensions: 1039
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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