Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1106
         (560 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-P...    68   1e-11
AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-P...    65   5e-11
J03177-1|AAA28535.1|  510|Drosophila melanogaster protein ( D.me...    28   7.5  
BT023936-1|ABB36440.1|  510|Drosophila melanogaster RE06859p pro...    28   7.5  
BT010029-1|AAQ22498.1|  426|Drosophila melanogaster RE03865p pro...    28   7.5  
AE014297-4241|AAF56798.1|  510|Drosophila melanogaster CG10002-P...    28   7.5  

>AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-PA
           protein.
          Length = 171

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
 Frame = +3

Query: 162 PIGFPDTPNRITVA---VGDRFGDDDSTTP---RLPIEANGDLELIDRLSKLPVDKQPFW 323
           P+  P  P  +  +   V +  G    T P   RLPI+A GD + ++RL +LPVD+QPFW
Sbjct: 82  PLVHPSAPEELLASYSPVNNAAGFPAQTAPDNSRLPIDARGDRDWVNRLKQLPVDQQPFW 141

Query: 324 FINWQALEAHRKNPQTHV 377
            +N+QA+EA R NP+ +V
Sbjct: 142 LVNYQAIEAMRNNPRPNV 159


>AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-PA
           protein.
          Length = 190

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 26/45 (57%), Positives = 39/45 (86%)
 Frame = +3

Query: 243 RLPIEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHV 377
           +LPI+A+GD E ++ LS+LPV++QPFWFIN+QA+EAHR + + +V
Sbjct: 134 QLPIDAHGDREWVNHLSQLPVEQQPFWFINYQAIEAHRNSSRPNV 178


>J03177-1|AAA28535.1|  510|Drosophila melanogaster protein (
           D.melanogaster forkhead protein (fkh) gene, complete
           cds. ).
          Length = 510

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 23/87 (26%), Positives = 41/87 (47%)
 Frame = -1

Query: 329 DEPEGLLVDRQLAQSIDQL*VSVRFDRKSWRC*VVIAKSVSDSYGDSVRCIRESNRP*SG 150
           + P  +L   ++ Q I  L    R +++ W+  +  + S +D +   V+  R  ++P  G
Sbjct: 225 NNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF---VKIPRTPDKP--G 279

Query: 149 EGGSLTQHQCR*GQQYNNGCYVLRNHR 69
           +G   T H    G  + NGCY+ R  R
Sbjct: 280 KGSFWTLHPDS-GNMFENGCYLRRQKR 305


>BT023936-1|ABB36440.1|  510|Drosophila melanogaster RE06859p
           protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 23/87 (26%), Positives = 41/87 (47%)
 Frame = -1

Query: 329 DEPEGLLVDRQLAQSIDQL*VSVRFDRKSWRC*VVIAKSVSDSYGDSVRCIRESNRP*SG 150
           + P  +L   ++ Q I  L    R +++ W+  +  + S +D +   V+  R  ++P  G
Sbjct: 225 NNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF---VKIPRTPDKP--G 279

Query: 149 EGGSLTQHQCR*GQQYNNGCYVLRNHR 69
           +G   T H    G  + NGCY+ R  R
Sbjct: 280 KGSFWTLHPDS-GNMFENGCYLRRQKR 305


>BT010029-1|AAQ22498.1|  426|Drosophila melanogaster RE03865p
           protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 23/87 (26%), Positives = 41/87 (47%)
 Frame = -1

Query: 329 DEPEGLLVDRQLAQSIDQL*VSVRFDRKSWRC*VVIAKSVSDSYGDSVRCIRESNRP*SG 150
           + P  +L   ++ Q I  L    R +++ W+  +  + S +D +   V+  R  ++P  G
Sbjct: 225 NNPTRMLALSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF---VKIPRTPDKP--G 279

Query: 149 EGGSLTQHQCR*GQQYNNGCYVLRNHR 69
           +G   T H    G  + NGCY+ R  R
Sbjct: 280 KGSFWTLHPDS-GNMFENGCYLRRQKR 305


>AE014297-4241|AAF56798.1|  510|Drosophila melanogaster CG10002-PA
           protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 23/87 (26%), Positives = 41/87 (47%)
 Frame = -1

Query: 329 DEPEGLLVDRQLAQSIDQL*VSVRFDRKSWRC*VVIAKSVSDSYGDSVRCIRESNRP*SG 150
           + P  +L   ++ Q I  L    R +++ W+  +  + S +D +   V+  R  ++P  G
Sbjct: 225 NNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF---VKIPRTPDKP--G 279

Query: 149 EGGSLTQHQCR*GQQYNNGCYVLRNHR 69
           +G   T H    G  + NGCY+ R  R
Sbjct: 280 KGSFWTLHPDS-GNMFENGCYLRRQKR 305


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,137,892
Number of Sequences: 53049
Number of extensions: 466696
Number of successful extensions: 1140
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)