Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1106
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1 prot... 29 3.0
X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein. 29 3.0
U00064-6|AAB52703.1| 213|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical... 29 3.0
Z78546-1|CAB01769.1| 364|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical pr... 28 5.3
U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork head/HNF-3... 28 5.3
AC025721-9|AAK29904.3| 639|Caenorhabditis elegans Hypothetical ... 28 5.3
AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical ... 28 5.3
Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2 prot... 27 9.2
U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catal... 27 9.2
AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical... 27 9.2
AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical ... 27 9.2
AF047651-5|AAC02722.2| 702|Caenorhabditis elegans Germline-enha... 27 9.2
>Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1
protein.
Length = 497
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 264 GDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHVQRPNGFID 401
G+ +L+ + + + P F N+ + ++NPQTH++ PN D
Sbjct: 137 GNWDLVGNNTPIFFIRDPIHFPNF--IHTQKRNPQTHLKDPNMIFD 180
>X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein.
Length = 500
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 264 GDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHVQRPNGFID 401
G+ +L+ + + + P F N+ + ++NPQTH++ PN D
Sbjct: 137 GNWDLVGNNTPIFFIRDPIHFPNF--IHTQKRNPQTHLKDPNMIFD 180
>U00064-6|AAB52703.1| 213|Caenorhabditis elegans Hypothetical
protein ZC155.2 protein.
Length = 213
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 174 PDTPNRITVAVGD-RFGDDDSTTPRLPI 254
P+ PNR+T+ GD R DD+ T R+ +
Sbjct: 15 PNVPNRVTIPDGDLRRNSDDTATDRISL 42
>AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical
protein Y54G11A.5 protein.
Length = 500
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 264 GDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHVQRPNGFID 401
G+ +L+ + + + P F N+ + ++NPQTH++ PN D
Sbjct: 137 GNWDLVGNNTPIFFIRDPIHFPNF--IHTQKRNPQTHLKDPNMIFD 180
>Z78546-1|CAB01769.1| 364|Caenorhabditis elegans Hypothetical
protein T21H8.3 protein.
Length = 364
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = +2
Query: 254 RSERRLRVDR*TEQAACRQATLLVHQLASLRSAQEEPTNSRAEA*RIHRSHHAQSKRCYR 433
R ERRL R + Q QL L E SR R+ R H A SK C
Sbjct: 295 RDERRLVAVR--RKIVADQENAQTDQLNMLIENWETKFESRENDSRVVREHTASSKLCRF 352
Query: 434 PSKLKRSVVSI 466
+K +R++ +I
Sbjct: 353 FNKRQRTIAAI 363
>Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical
protein F38A6.1c protein.
Length = 411
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 203 SYGDS-VRCIRESNRP*SGEGGSLTQHQCR*GQQYNNGCYVLRNHR 69
S+ D V+ R ++P G +L +H C G + NGCY+ R R
Sbjct: 194 SFNDCFVKVARSPDKPGKGSFWTLHEH-C--GNMFENGCYLRRQKR 236
>Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical
protein F38A6.1b protein.
Length = 442
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 203 SYGDS-VRCIRESNRP*SGEGGSLTQHQCR*GQQYNNGCYVLRNHR 69
S+ D V+ R ++P G +L +H C G + NGCY+ R R
Sbjct: 225 SFNDCFVKVARSPDKPGKGSFWTLHEH-C--GNMFENGCYLRRQKR 267
>Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical
protein F38A6.1a protein.
Length = 506
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 203 SYGDS-VRCIRESNRP*SGEGGSLTQHQCR*GQQYNNGCYVLRNHR 69
S+ D V+ R ++P G +L +H C G + NGCY+ R R
Sbjct: 289 SFNDCFVKVARSPDKPGKGSFWTLHEH-C--GNMFENGCYLRRQKR 331
>U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork
head/HNF-3-like protein protein.
Length = 506
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 203 SYGDS-VRCIRESNRP*SGEGGSLTQHQCR*GQQYNNGCYVLRNHR 69
S+ D V+ R ++P G +L +H C G + NGCY+ R R
Sbjct: 289 SFNDCFVKVARSPDKPGKGSFWTLHEH-C--GNMFENGCYLRRQKR 331
>AC025721-9|AAK29904.3| 639|Caenorhabditis elegans Hypothetical
protein Y48G8AL.5 protein.
Length = 639
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 222 DDDSTTPRLPIEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRK 359
+D++ +L ++ G L+L+D S LP K+ + W+ + K
Sbjct: 316 EDEAVVAQLLRDSKGSLKLVDTSSLLPELKRETGVVQWKVFDRDMK 361
>AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical
protein F55A3.3 protein.
Length = 1030
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 268 SPFASIGSLGVVESSSPNLSPTATVIL 188
SPFA +G GV S+ L PTA+ ++
Sbjct: 799 SPFAGLGFFGVPYRSATTLKPTASCLV 825
>Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2
protein.
Length = 497
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 342 LEAHRKNPQTHVQRPNGFID 401
+ A ++NPQTH++ PN D
Sbjct: 161 IHALKRNPQTHMRDPNALFD 180
>U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catalase
protein.
Length = 496
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 342 LEAHRKNPQTHVQRPNGFID 401
+ A ++NPQTH++ PN D
Sbjct: 161 IHALKRNPQTHMRDPNALFD 180
>AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical
protein Y54G11A.13 protein.
Length = 512
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 342 LEAHRKNPQTHVQRPNGFID 401
+ A ++NPQTH++ PN D
Sbjct: 176 IHALKRNPQTHMRDPNALFD 195
>AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical
protein Y54G11A.6 protein.
Length = 497
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 342 LEAHRKNPQTHVQRPNGFID 401
+ A ++NPQTH++ PN D
Sbjct: 161 IHALKRNPQTHMRDPNALFD 180
>AF047651-5|AAC02722.2| 702|Caenorhabditis elegans
Germline-enhanced at-hook proteinprotein 1 protein.
Length = 702
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 141 PSFAGSRPIGFPDTPNRITVAVGDRFGDDD 230
PS + +RP+G P T + AV + D+D
Sbjct: 529 PSSSAARPVGRPPTTQPVETAVEKKKNDED 558
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,545,710
Number of Sequences: 27780
Number of extensions: 225577
Number of successful extensions: 595
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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