Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1104
         (796 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   2.5  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   2.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   2.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   2.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   4.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.7  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    21   10.0 

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +1

Query: 628 ENEMYLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 768
           +NE  L+  S+    DV+ L    G  E  + +  +    EDFDN +
Sbjct: 119 QNETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEI 165


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +1

Query: 628 ENEMYLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 768
           +NE  L+  S+    DV+ L    G  E  + +  +    EDFDN +
Sbjct: 167 QNETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEI 213


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +1

Query: 628 ENEMYLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 768
           +NE  L+  S+    DV+ L    G  E  + +  +    EDFDN +
Sbjct: 167 QNETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEI 213


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +1

Query: 628 ENEMYLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 768
           +NE  L+  S+    DV+ L    G  E  + +  +    EDFDN +
Sbjct: 167 QNETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEI 213


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 748 HLPSGCRRRWISPRRYHP 695
           H P+G  + WI+  RY P
Sbjct: 794 HTPNGIVKTWIAHDRYLP 811


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 516 QRQATKDAGTISGLNVLRIINEPTAAAIAYG 608
           Q +A K A  +   N   II+EPT     YG
Sbjct: 353 QAEAEKHAAMLYQYNFNIIISEPTERISPYG 383


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
          finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 60 PFCIFNQSCYLFLKQ 16
          P+C  N SCY  LK+
Sbjct: 9  PYCRRNFSCYYSLKR 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,776
Number of Sequences: 438
Number of extensions: 5799
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)