Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1102
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    25   0.49 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    25   0.49 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.85 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    24   1.5  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   3.4  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   6.0  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   6.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   6.0  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 389 WLMSRFFYYFCHSNIVAKY 333
           + +S FFY+F   NI+A Y
Sbjct: 241 FFISTFFYFFTTGNIIATY 259


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 389 WLMSRFFYYFCHSNIVAKY 333
           + +S FFY+F   NI+A Y
Sbjct: 237 FFISTFFYFFTTGNIIATY 255


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 198 CPNGYNGQKCQQLEVDKEPP 257
           CP G+ GQ C +L VD   P
Sbjct: 210 CPKGFQGQNC-ELNVDDCKP 228



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 476 NLKCACCCITHGVICNVGYVICSP 405
           +  C+C   T G IC +    C P
Sbjct: 243 SFSCSCPSGTLGYICEINVDDCRP 266


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 276 GDLWVIAKNGSSIVN-WDAPVFSDNVGVAKVVEKSGHKPGENLA 404
           G L  IA +   I + +D P  S+NV V  ++    H PG  +A
Sbjct: 171 GHLLTIAVSAIPIDDAYDIPGMSENVDVINLMTYDFHIPGGGIA 214


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -1

Query: 685 YISGKLGSDVGLQKPSAPHVKNGGTGCENRKPSRQAISQTLN-WPPAPQS 539
           ++  KL  ++ L      H K      ++ K   Q + ++L  WPPAPQ+
Sbjct: 300 HVQKKLQKEIDLTLQEN-HGKISYNVLQSMKYLDQVVCESLRLWPPAPQT 348


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +3

Query: 507 PDPLGGYQSCRDWGAGGQFKVCEIACRDGLRFS 605
           PD +G +   R+W +    +    A R G+ +S
Sbjct: 113 PDAMGKWCPRREWSSPPDARAASDAARRGVLYS 145


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 470 KCACCCITHGVICNVGYVICSPS 402
           +C C     G +CN+    CSP+
Sbjct: 91  QCICKEGWEGALCNINTDDCSPN 113


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +3

Query: 507 PDPLGGYQSCRDWGAGGQFKVCEIACRDGLRFS 605
           PD +G +   R+W +    +    A R G+ +S
Sbjct: 269 PDAMGKWCPRREWSSPPDARAASDAARRGVLYS 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,196
Number of Sequences: 336
Number of extensions: 4315
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)