Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1098
(316 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 27 8.8
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 27 8.8
M59832-1|AAA63215.1| 1130|Homo sapiens merosin protein. 27 8.8
BC050538-1|AAH50538.1| 442|Homo sapiens radical S-adenosyl meth... 27 8.8
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 27 8.8
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 27 8.8
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 27 8.8
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 27 8.8
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 27 8.8
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 27 8.8
AK222472-1|BAD96192.1| 442|Homo sapiens radical S-adenosyl meth... 27 8.8
AK022105-1|BAB13962.1| 442|Homo sapiens protein ( Homo sapiens ... 27 8.8
AK002026-1|BAA92043.1| 442|Homo sapiens protein ( Homo sapiens ... 27 8.8
AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit... 27 8.8
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 98 VPEARSLGPPPLVTVLSVRNMFSLFIAGVRGLLKSID 208
VP PP T+L V LF+ G+ G LK D
Sbjct: 2256 VPSTHHSTSPPGYTILDVDANAMLFVGGLTGKLKKAD 2292
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain protein.
Length = 3110
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 98 VPEARSLGPPPLVTVLSVRNMFSLFIAGVRGLLKSID 208
VP PP T+L V LF+ G+ G LK D
Sbjct: 2256 VPSTHHSTSPPGYTILDVDANAMLFVGGLTGKLKKAD 2292
>M59832-1|AAA63215.1| 1130|Homo sapiens merosin protein.
Length = 1130
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 98 VPEARSLGPPPLVTVLSVRNMFSLFIAGVRGLLKSID 208
VP PP T+L V LF+ G+ G LK D
Sbjct: 276 VPSTHHSTSPPGYTILDVDANAMLFVGGLTGKLKKAD 312
>BC050538-1|AAH50538.1| 442|Homo sapiens radical S-adenosyl
methionine domain containing 1 protein.
Length = 442
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 149 RRGLLQGGGAPASEPPGRTASLLI 78
RR + GG+P+ EP GR A+L +
Sbjct: 21 RRRVENAGGSPSPEPAGRRAALYV 44
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 98 VPEARSLGPPPLVTVLSVRNMFSLFIAGVRGLLKSID 208
VP PP T+L V LF+ G+ G LK D
Sbjct: 2256 VPSTHHSTSPPGYTILDVDANAMLFVGGLTGKLKKAD 2292
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 98 VPEARSLGPPPLVTVLSVRNMFSLFIAGVRGLLKSID 208
VP PP T+L V LF+ G+ G LK D
Sbjct: 2256 VPSTHHSTSPPGYTILDVDANAMLFVGGLTGKLKKAD 2292
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 98 VPEARSLGPPPLVTVLSVRNMFSLFIAGVRGLLKSID 208
VP PP T+L V LF+ G+ G LK D
Sbjct: 2256 VPSTHHSTSPPGYTILDVDANAMLFVGGLTGKLKKAD 2292
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 98 VPEARSLGPPPLVTVLSVRNMFSLFIAGVRGLLKSID 208
VP PP T+L V LF+ G+ G LK D
Sbjct: 2256 VPSTHHSTSPPGYTILDVDANAMLFVGGLTGKLKKAD 2292
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 98 VPEARSLGPPPLVTVLSVRNMFSLFIAGVRGLLKSID 208
VP PP T+L V LF+ G+ G LK D
Sbjct: 2256 VPSTHHSTSPPGYTILDVDANAMLFVGGLTGKLKKAD 2292
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 98 VPEARSLGPPPLVTVLSVRNMFSLFIAGVRGLLKSID 208
VP PP T+L V LF+ G+ G LK D
Sbjct: 2256 VPSTHHSTSPPGYTILDVDANAMLFVGGLTGKLKKAD 2292
>AK222472-1|BAD96192.1| 442|Homo sapiens radical S-adenosyl
methionine domain containing 1 variant protein.
Length = 442
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 149 RRGLLQGGGAPASEPPGRTASLLI 78
RR + GG+P+ EP GR A+L +
Sbjct: 21 RRRVENAGGSPSPEPAGRRAALYV 44
>AK022105-1|BAB13962.1| 442|Homo sapiens protein ( Homo sapiens
cDNA FLJ12043 fis, clone HEMBB1001950, weakly similar to
PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III
OXIDASE (EC ).
Length = 442
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 149 RRGLLQGGGAPASEPPGRTASLLI 78
RR + GG+P+ EP GR A+L +
Sbjct: 21 RRRVENAGGSPSPEPAGRRAALYV 44
>AK002026-1|BAA92043.1| 442|Homo sapiens protein ( Homo sapiens
cDNA FLJ11164 fis, clone PLACE1007226, weakly similar to
PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III
OXIDASE (EC ).
Length = 442
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 149 RRGLLQGGGAPASEPPGRTASLLI 78
RR + GG+P+ EP GR A+L +
Sbjct: 21 RRRVENAGGSPSPEPAGRRAALYV 44
>AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit
precursor variant protein.
Length = 1853
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 98 VPEARSLGPPPLVTVLSVRNMFSLFIAGVRGLLKSID 208
VP PP T+L V LF+ G+ G LK D
Sbjct: 991 VPSTHHSTSPPGYTILDVDANAMLFVGGLTGKLKKAD 1027
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,128,974
Number of Sequences: 237096
Number of extensions: 1399741
Number of successful extensions: 2627
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2627
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -