Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1098
         (316 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    21   2.7  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           21   3.5  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   4.7  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   6.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   6.2  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 262 TETLELISQGGWRIHVVDVY 203
           T TL L++    +IH VD Y
Sbjct: 136 TITLTLLAYQATKIHAVDTY 155


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 168 KENMFLTERTVTRGGGPSERASGTDRLV 85
           +E   LT   VT  G      SGTDR++
Sbjct: 51  EEQDILTSSGVTLAGNRYIYLSGTDRVI 78


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 80  IETI*LRLKPNGTWS**TSFKCYLF 6
           + T+ +    NG W      KCY++
Sbjct: 50  VATVDIEAVRNGQWPETRQLKCYMY 74


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -3

Query: 149 RRGLLQGGG 123
           R+GLL+GGG
Sbjct: 371 RKGLLKGGG 379


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 245 YISRWVAHPRCRCLWTSVTP 186
           ++  W  H +CR    SVTP
Sbjct: 426 FVEFWEHHFQCRYPNASVTP 445



 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 289 DGWGGHCNYTETLELIS 239
           DG   HCN T   ++IS
Sbjct: 197 DGAEDHCNKTAVRKVIS 213


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,980
Number of Sequences: 438
Number of extensions: 2329
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)