Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1096
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.38 
AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal glutath...    27   0.67 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   1.5  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   2.0  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    25   2.7  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    25   2.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.2  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   8.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = -1

Query: 635 SDTGAHLANIAFKAGKVVPSPRPSSTLKIISP-VAPPALTAQGVNKVNTAVLSTPNPREY 459
           S  GA LA  + K+    PSP P++     SP VA  +    G N  N+A  + P+P  Y
Sbjct: 725 SPHGAPLALTSSKSASTHPSPHPATRASPSSPIVATSSSGGGGSNTPNSA--AAPHP-YY 781

Query: 458 FPPNLSASIP 429
               ++A+ P
Sbjct: 782 TAAAMAAASP 791


>AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal
           glutathione transferase GSTMIC3protein.
          Length = 147

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 463 SLGFGVLSTAVFTLFTPWAVSAGGATGLIILRVLEGLGEGT 585
           SL FG +  A+F  +  WA   G    ++++ VL GL  G+
Sbjct: 2   SLVFGQVEPAIFKAYAFWAAVLG--LKMLLMSVLTGLKRGS 40


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = -3

Query: 243 DVQTHSHRVRVGYRQETHYCHHPSLW--YEE*FRQY 142
           + Q  S R R  ++Q+ H C     W  YEE F  Y
Sbjct: 205 EAQLQSMRAREEFQQQIHVCMARKAWLEYEELFLLY 240


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 605 AFKAGKVVPSPRPSSTLKIISPVAPPAL 522
           A+KAGK+ P+P  +   K    + PP +
Sbjct: 56  AYKAGKIAPNPFTAGPPKPNISIPPPTM 83


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = +1

Query: 376 GIILSSFYYGYIVTHLPGGMLAERFGGKYSLGFGVLSTAVFTLF 507
           GI +  +  G I T  PGG     F   Y   F  L  AVF +F
Sbjct: 461 GIAIVGYGIGIIYT-TPGGQYVLDFLDFYGASFVALVLAVFEMF 503


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = +1

Query: 376 GIILSSFYYGYIVTHLPGGMLAERFGGKYSLGFGVLSTAVFTLF 507
           GI +  +  G I T  PGG     F   Y   F  L  AVF +F
Sbjct: 461 GIAIVGYGIGIIYT-TPGGQYVLDFLDFYGASFVALVLAVFEMF 503


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -1

Query: 641  PRSDTGAHLANIAFKAGKVVPSPRPSSTLKIISPVAPPALTAQ 513
            PR + GAHL+      G     P P   ++ +  V PP +  Q
Sbjct: 1739 PRMEEGAHLSFKVPPPGIEFTLPSPKIGIESLPVVDPPWMPRQ 1781


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = +1

Query: 94  LLWISETNKMLSGWRLILSKL 156
           L+ I+ETN   +G+R+++S+L
Sbjct: 422 LIDIAETNDYGTGYRVVMSRL 442


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,069
Number of Sequences: 2352
Number of extensions: 15490
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)