Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1095
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 130 1e-30
U28735-11|AAM69114.1| 358|Caenorhabditis elegans Hypothetical p... 115 3e-26
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 115 3e-26
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 115 3e-26
AF098995-13|AAC67476.2| 95|Caenorhabditis elegans Hypothetical... 31 0.63
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 30 1.9
Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68298-8|CAA92605.3| 449|Caenorhabditis elegans Hypothetical pr... 29 4.5
L23647-2|AAK29995.1| 773|Caenorhabditis elegans Hypothetical pr... 28 5.9
L23647-1|AAL11102.1| 624|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical pr... 28 7.8
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 7.8
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 130 bits (314), Expect = 1e-30
Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 12/205 (5%)
Frame = +2
Query: 14 KWNREVAGQREILAAYGGVKLEDVRGMRAPFLSVGGNKMFKMLYDSNFTYDSSLPVYE-- 187
+W E+ GQR ILA +GG E++ G+R+P L++GG+ F+M+ + F +D+S+
Sbjct: 1606 RWLNEMDGQRRILAKFGGAPEEEIVGIRSPQLALGGDNQFEMMIGAEFLWDNSMSANPGI 1665
Query: 188 NRPPSWPYTLDYKLFHDCMIPPCPTKSYPGVWEVPM------VMWQDLNGGRCSMGDACA 349
+ P WP T+DY++ DC CP S+PGVW VP+ M Q + R SM A
Sbjct: 1666 HGEPFWPQTMDYQVAWDCNEASCPKSSFPGVWSVPLNQFYGSYMSQIDSFRRSSMLRAAV 1725
Query: 350 NPPEP-ENVYKMILKNFDRHYSTNRAPFGLFYHAAWFTQPHHKEGF---IMFLDHINQMP 517
+ + + ++I +NF+R YS NRAP+ L +A + H +G FL+ ++
Sbjct: 1726 DLNNTVDELEEIITRNFERSYSANRAPYVLSLNADFLQLGGHNKGMKAVQKFLNRMSAQK 1785
Query: 518 DVWIVTNWQALQWVRDPTPISRINN 592
DV+IVT Q + W++ P PIS + +
Sbjct: 1786 DVYIVTIKQLIDWMKRPVPISEMKS 1810
>U28735-11|AAM69114.1| 358|Caenorhabditis elegans Hypothetical
protein F48E3.8c protein.
Length = 358
Score = 115 bits (277), Expect = 3e-26
Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Frame = +2
Query: 5 SQKKWNREVAGQREILAAYGGVKLEDVRGMRAPFLSVGGNKMFKMLYDSNFTYDSSLPVY 184
+Q++W +E G RE LA + + + G RAP L +GG+ ++M+ ++NFT+D+S+ V
Sbjct: 130 TQERWYKEQKGMRETLAEFSFIDRSHIIGTRAPELKIGGDAQYRMMSENNFTFDNSMLV- 188
Query: 185 ENRPPSWPYTLDYKLFHDCMIPPCPTKSYPGVWEVPMVMWQDLNGGRCSMGDACANPP-- 358
P WP TLD+KL +C CPT+S+ +WE+P+ Q N R A P
Sbjct: 189 --SSPYWPQTLDHKLAWEC-DGNCPTQSHKAIWEIPIQNIQ-ANDTRWYKTLTRAMKPFD 244
Query: 359 EPENVYKMILKNFDRHYSTNRAPFGLFYHAAWFTQPHHKEGFIMFLDHINQMPDVWIVTN 538
++V KM+ +NF HY TN G Y FL I Q DV++VT
Sbjct: 245 SRDSVTKMLQRNFMNHYKTNHN--GAVY------------ALRDFLKFIVQKQDVFVVTG 290
Query: 539 WQALQWVRDPTPISRINNFQPFQCNYQ--DRPKKCNNP 646
Q + ++R+P ++ I + + +QC Q D C NP
Sbjct: 291 SQIIDYMRNPVDLNNIKSLRSWQCKPQMKDEANPCENP 328
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 115 bits (277), Expect = 3e-26
Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Frame = +2
Query: 5 SQKKWNREVAGQREILAAYGGVKLEDVRGMRAPFLSVGGNKMFKMLYDSNFTYDSSLPVY 184
+Q++W +E G RE LA + + + G RAP L +GG+ ++M+ ++NFT+D+S+ V
Sbjct: 2199 TQERWYKEQKGMRETLAEFSFIDRSHIIGTRAPELKIGGDAQYRMMSENNFTFDNSMLV- 2257
Query: 185 ENRPPSWPYTLDYKLFHDCMIPPCPTKSYPGVWEVPMVMWQDLNGGRCSMGDACANPP-- 358
P WP TLD+KL +C CPT+S+ +WE+P+ Q N R A P
Sbjct: 2258 --SSPYWPQTLDHKLAWEC-DGNCPTQSHKAIWEIPIQNIQ-ANDTRWYKTLTRAMKPFD 2313
Query: 359 EPENVYKMILKNFDRHYSTNRAPFGLFYHAAWFTQPHHKEGFIMFLDHINQMPDVWIVTN 538
++V KM+ +NF HY TN G Y FL I Q DV++VT
Sbjct: 2314 SRDSVTKMLQRNFMNHYKTNHN--GAVY------------ALRDFLKFIVQKQDVFVVTG 2359
Query: 539 WQALQWVRDPTPISRINNFQPFQCNYQ--DRPKKCNNP 646
Q + ++R+P ++ I + + +QC Q D C NP
Sbjct: 2360 SQIIDYMRNPVDLNNIKSLRSWQCKPQMKDEANPCENP 2397
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical protein
F48E3.8b protein.
Length = 1299
Score = 115 bits (277), Expect = 3e-26
Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Frame = +2
Query: 5 SQKKWNREVAGQREILAAYGGVKLEDVRGMRAPFLSVGGNKMFKMLYDSNFTYDSSLPVY 184
+Q++W +E G RE LA + + + G RAP L +GG+ ++M+ ++NFT+D+S+ V
Sbjct: 1071 TQERWYKEQKGMRETLAEFSFIDRSHIIGTRAPELKIGGDAQYRMMSENNFTFDNSMLV- 1129
Query: 185 ENRPPSWPYTLDYKLFHDCMIPPCPTKSYPGVWEVPMVMWQDLNGGRCSMGDACANPP-- 358
P WP TLD+KL +C CPT+S+ +WE+P+ Q N R A P
Sbjct: 1130 --SSPYWPQTLDHKLAWEC-DGNCPTQSHKAIWEIPIQNIQ-ANDTRWYKTLTRAMKPFD 1185
Query: 359 EPENVYKMILKNFDRHYSTNRAPFGLFYHAAWFTQPHHKEGFIMFLDHINQMPDVWIVTN 538
++V KM+ +NF HY TN G Y FL I Q DV++VT
Sbjct: 1186 SRDSVTKMLQRNFMNHYKTNHN--GAVY------------ALRDFLKFIVQKQDVFVVTG 1231
Query: 539 WQALQWVRDPTPISRINNFQPFQCNYQ--DRPKKCNNP 646
Q + ++R+P ++ I + + +QC Q D C NP
Sbjct: 1232 SQIIDYMRNPVDLNNIKSLRSWQCKPQMKDEANPCENP 1269
>AF098995-13|AAC67476.2| 95|Caenorhabditis elegans Hypothetical
protein F58E1.13 protein.
Length = 95
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 452 KPRDRINRKVPCWCYSVYRSSSESFY 375
KP I PCW + VY SS FY
Sbjct: 54 KPEFDITHPTPCWSFRVYNSSYSGFY 79
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 434 LFYHAAWFTQPHHKEGFIMFLDHINQMPDVWIVTNWQALQWVRD-PTPI 577
LF+H+ F Q HKE L + +Q W T W L+ +R+ P P+
Sbjct: 364 LFFHST-FHQLTHKEEIFAVLQNWDQTEKDWSPTFWFLLKCIREMPIPL 411
>Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical
protein F41E7.6 protein.
Length = 557
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 173 LPVYENRPPSWPYTLDYKLFHDCMIPPCP 259
+ V ++R SW DY LF+ C +P P
Sbjct: 131 IEVTKSRGNSWDMNQDYNLFNACRVPALP 159
>Z68298-8|CAA92605.3| 449|Caenorhabditis elegans Hypothetical
protein F44D12.9 protein.
Length = 449
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 437 FYHAAWFTQPHHKEGFIMFLDHINQMPDVWIV 532
+YH WF ++++ F+ + +Q+P+V I+
Sbjct: 65 YYHDYWFNNTNYQDSFMSIIGVTSQIPNVGIM 96
>L23647-2|AAK29995.1| 773|Caenorhabditis elegans Hypothetical
protein ZC262.3a protein.
Length = 773
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 524 WIVTNWQALQWVRDPTPISRINNFQPFQCNYQDRPKKCNNPQSVQPLAQIRSKIHENMST 703
WI+T AL W++ +SR+ Y+ R + + + + + +R H+ +
Sbjct: 516 WILTRKSALWWIQRAERLSRVRKMVEAMEKYRVRQMESLHEKYTKRVQIVRDNYHQQVEA 575
Query: 704 L 706
L
Sbjct: 576 L 576
>L23647-1|AAL11102.1| 624|Caenorhabditis elegans Hypothetical
protein ZC262.3b protein.
Length = 624
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 524 WIVTNWQALQWVRDPTPISRINNFQPFQCNYQDRPKKCNNPQSVQPLAQIRSKIHENMST 703
WI+T AL W++ +SR+ Y+ R + + + + + +R H+ +
Sbjct: 516 WILTRKSALWWIQRAERLSRVRKMVEAMEKYRVRQMESLHEKYTKRVQIVRDNYHQQVEA 575
Query: 704 L 706
L
Sbjct: 576 L 576
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 425 VPCWCYSVYRSSSESFYKRFRVQVD*RKHHPWSIGPRSSLATSPWGP 285
+PC+C V + S S Y+R V +D + + +S + P+ P
Sbjct: 719 IPCFCSGVTQQCSASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 425 VPCWCYSVYRSSSESFYKRFRVQVD*RKHHPWSIGPRSSLATSPWGP 285
+PC+C V + S S Y+R V +D + + +S + P+ P
Sbjct: 719 IPCFCSGVTQQCSASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 425 VPCWCYSVYRSSSESFYKRFRVQVD*RKHHPWSIGPRSSLATSPWGP 285
+PC+C V + S S Y+R V +D + + +S + P+ P
Sbjct: 719 IPCFCSGVTQQCSASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 425 VPCWCYSVYRSSSESFYKRFRVQVD*RKHHPWSIGPRSSLATSPWGP 285
+PC+C V + S S Y+R V +D + + +S + P+ P
Sbjct: 719 IPCFCSGVTQQCSASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 425 VPCWCYSVYRSSSESFYKRFRVQVD*RKHHPWSIGPRSSLATSPWGP 285
+PC+C V + S S Y+R V +D + + +S + P+ P
Sbjct: 719 IPCFCSGVTQQCSASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 425 VPCWCYSVYRSSSESFYKRFRVQVD*RKHHPWSIGPRSSLATSPWGP 285
+PC+C V + S S Y+R V +D + + +S + P+ P
Sbjct: 719 IPCFCSGVTQQCSASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 425 VPCWCYSVYRSSSESFYKRFRVQVD*RKHHPWSIGPRSSLATSPWGP 285
+PC+C V + S S Y+R V +D + + +S + P+ P
Sbjct: 719 IPCFCSGVTQQCSASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 425 VPCWCYSVYRSSSESFYKRFRVQVD*RKHHPWSIGPRSSLATSPWGP 285
+PC+C V + S S Y+R V +D + + +S + P+ P
Sbjct: 719 IPCFCSGVTQQCSASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 425 VPCWCYSVYRSSSESFYKRFRVQVD*RKHHPWSIGPRSSLATSPWGP 285
+PC+C V + S S Y+R V +D + + +S + P+ P
Sbjct: 719 IPCFCSGVTQQCSASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 765
>Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical
protein R07E5.2 protein.
Length = 226
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 317 RSSLATSPWGPPKHLDRISSDTVVSYSRGIVYNREYKASWAVCF 186
R+ L+ P GP + VV ++ +++YK W V F
Sbjct: 25 RALLSLRPLGPKNTVPAFKGTAVVDGDFKVISDQDYKGKWLVMF 68
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 425 VPCWCYSVYRSSSESFYKRFRVQVD*RKHHPWSIGPRSSLATSPWGP 285
+PC+C V + S S Y+R V +D + + +S + P+ P
Sbjct: 718 IPCFCSGVTQQCSASSYRRTSVSIDYARGDRDQLELTTSDSRQPYSP 764
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,458,177
Number of Sequences: 27780
Number of extensions: 468893
Number of successful extensions: 1350
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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