Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1093
(602 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 50 4e-08
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 50 8e-08
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 49 1e-07
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 48 2e-07
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 46 9e-07
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 43 9e-06
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 42 2e-05
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 41 3e-05
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 39 1e-04
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 38 2e-04
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 38 2e-04
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 35 0.002
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 33 0.009
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 29 0.088
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 29 0.15
Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein... 25 1.4
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 25 1.4
AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsiv... 25 1.9
AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein p... 24 4.4
AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein p... 24 4.4
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 5.8
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 7.6
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 50.4 bits (115), Expect = 4e-08
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
Frame = +2
Query: 11 IPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 190
IP + +ADD V R A ++A A+ QW ++ +++ PAK+ +
Sbjct: 666 IPLPDEAKVIGYADDLVVLAPGRTPEESAAVAEAAVSAVDQWMQQHHLELAPAKTEMTII 725
Query: 191 QXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAF 370
I + ++P++R +K+LGV + +++ PH+ +V RA
Sbjct: 726 SSLKHPPSHIS---------IDVRGTAVPYSRSIKHLGVLVHDHLSWIPHVTAVTQRAVQ 776
Query: 371 I---LGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAART 505
I +GRL P + KMS K L VM YA+ V+ A T
Sbjct: 777 IAQAVGRLMPN-HRGPKMS---KSRLLAAVADSVMRYAAPVWHEALNT 820
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 49.6 bits (113), Expect = 8e-08
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 5/198 (2%)
Frame = +2
Query: 2 VNDIPRS-PPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKST 178
+ND+ + PP ++LFADD ++ N LQ W ++ + I K
Sbjct: 758 INDVTLALPPDSISLFADDAKIFAPINNTG-DCTFLQDCIEIFCSWCKRNGLTICIEKCY 816
Query: 179 AVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRD 358
V F +T + ++ K LGV LD+S+ F+ HI V
Sbjct: 817 CVSFSRCRSP----------VTGTYFMDGTAVNRQNHAKDLGVLLDSSLNFKQHIDDVVA 866
Query: 359 RAAFILGRLYPMICKRSKMSLRNKV---TLYKTCIRPVMTYASVVFAHAARTHIDTLQSL 529
R +LG + R+ RN + +Y +R V+ Y+ VV++ + I ++++
Sbjct: 867 RGNQLLG-----VVIRTTNEFRNPMCIKAVYNCIVRSVLEYSCVVWSPTTASSIARIEAI 921
Query: 530 QSRFCRLAVG-APWFVRN 580
Q + R A+ PW RN
Sbjct: 922 QRKLTRYALRLLPWQDRN 939
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 49.2 bits (112), Expect = 1e-07
Identities = 36/163 (22%), Positives = 71/163 (43%)
Frame = +2
Query: 2 VNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTA 181
V DI P + +ADD + + + A +++ +W + +++ PAK+
Sbjct: 644 VLDIALPPDAEILGYADDLVLLVPGTTPDNVKAAAEEAIISVMEWMARHHLELAPAKTEM 703
Query: 182 VLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDR 361
V+ +T + + + +R ++YLGVTL +++ PH+K V +R
Sbjct: 704 VVISSTKAPT--------RIT--VRVGDVDVTSSRSIRYLGVTLQDKLSWLPHVKEVTER 753
Query: 362 AAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFA 490
A I ++ S+ +K L + VM YA+ V++
Sbjct: 754 AGKIADATSRLLRNHSE-PRASKAKLLASVSESVMRYAAPVWS 795
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 48.0 bits (109), Expect = 2e-07
Identities = 37/171 (21%), Positives = 77/171 (45%), Gaps = 4/171 (2%)
Frame = +2
Query: 2 VNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTA 181
V D+P P + +ADD + + + + + A + +W ++ +++ PAK+ A
Sbjct: 704 VLDVPLPPDVEVIGYADDLALLVPATTTDEVRARAEEAVDQVQRWMQQHGLELAPAKTEA 763
Query: 182 VLFQXXXXXXXXXXXXXXNLTPPITLF---SQSIPWARKVKYLGVTLDASMTFRPHIKSV 352
VL TPP F + +R ++YLGV L + +R H+ V
Sbjct: 764 VLISSKK-------------TPPQVTFRVGDVEVQSSRSIRYLGVQLQDHLKWRDHVTKV 810
Query: 353 RDRAAFILGRLYPMICKRS-KMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 502
++A+ ++ + ++ S + ++++ Y V+ YA+ V+A A +
Sbjct: 811 SEKASRVVAAVTRLMQNHSGPRTAKSRLLAY--VAESVLRYAAPVWAEATQ 859
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 46.0 bits (104), Expect = 9e-07
Identities = 42/177 (23%), Positives = 79/177 (44%)
Frame = +2
Query: 23 PPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXX 202
P L +ADD + + A + A A+ +W R+ +++ AK+ +
Sbjct: 665 PGAELIGYADDLVLLAPGTTPAAAAVVAEEAVSAVDRWLREHHLELAHAKTEMTVISSLQ 724
Query: 203 XXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGR 382
++T IT+ +P++R +KYLGV L ++++ PH+K+V +A I+ +
Sbjct: 725 QPPE-------DIT--ITVGGTEVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIV-Q 774
Query: 383 LYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLA 553
+ + ++ L M YA+ V+ H A T+ + +SL R R A
Sbjct: 775 AVTQLMPNHRGPKTSRCRLLAAVADSTMRYAAPVW-HGALTNRE-CRSLLKRVQRKA 829
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 42.7 bits (96), Expect = 9e-06
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 2/186 (1%)
Frame = +2
Query: 2 VNDIPRS-PPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKST 178
+ND+ PP L+ADD ++ + S LQ A W + + P K +
Sbjct: 687 INDVCNVLPPDGHLLYADDIKIFLPVSSSS-DCMSLQHYLNAFVHWCSSNLLRLCPDKCS 745
Query: 179 AVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRD 358
+ F ++ TL + S+ ++ LG+ LD+ + F+ + V
Sbjct: 746 VISFSHSLSP----------ISFNYTLSNSSLSRVLSIRDLGIILDSRLNFKLQLDEVLL 795
Query: 359 RAAFILGRLYPMICK-RSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQS 535
+A LG + R + LRN LY +RP++ YAS+++ ++S+Q
Sbjct: 796 KANRTLGFILRFTSIFRDQSFLRN---LYYALVRPLLEYASIIWNPPTIDGCSRIESIQR 852
Query: 536 RFCRLA 553
F R+A
Sbjct: 853 LFTRVA 858
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 41.9 bits (94), Expect = 2e-05
Identities = 25/111 (22%), Positives = 50/111 (45%)
Frame = +2
Query: 44 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXX 223
+ADD + + A + A A+ QW + R+++ +K+ +
Sbjct: 733 YADDLVLLVPGTTPTTAAAAAEEAVAAVKQWLLEHRLELAHSKTEMTVISSLKQPPEEVF 792
Query: 224 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 376
IT ++P++R +KYLGV + A +++ PH+K + +A I+
Sbjct: 793 ---------ITFGGVNVPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 41.1 bits (92), Expect = 3e-05
Identities = 31/151 (20%), Positives = 64/151 (42%)
Frame = +2
Query: 44 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXX 223
FADD + + A + A A+ W + ++ + P K+ ++
Sbjct: 667 FADDLAILAAGTIPEHAAAIAEEAVAAVNNWMVQHKLSLAPEKTELLMISSKRSGYR--- 723
Query: 224 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICK 403
N+ P+ + + R ++YLGV L +++RPH++ V D+A ++ L ++
Sbjct: 724 ----NI--PVNICGVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRALRGIMRN 777
Query: 404 RSKMSLRNKVTLYKTCIRPVMTYASVVFAHA 496
S + +K L ++ Y + V+ A
Sbjct: 778 HSGPQV-SKRKLLAAVAASIIRYGAPVWTEA 807
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 39.1 bits (87), Expect = 1e-04
Identities = 32/162 (19%), Positives = 64/162 (39%)
Frame = +2
Query: 2 VNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTA 181
V D+ + +ADD + + + + + A ++ W + + I P K+
Sbjct: 711 VLDVALPQDCEMVAYADDLVLLIPGIDVNAVKAAAEEAVASVSHWMAQHHLQIAPEKTEC 770
Query: 182 VLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDR 361
VL I + + +R ++YLGVTL +++ PH++ V R
Sbjct: 771 VLISSTKNPTQVT----------IRVGDVEVTSSRTMRYLGVTLHDHLSWLPHVREVTTR 820
Query: 362 AAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVF 487
A I + ++ S +K L + V+ YA+ ++
Sbjct: 821 ARKIADAVTRLLRNHSGPK-TSKARLLASVAESVIRYAAPIW 861
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 37.9 bits (84), Expect = 2e-04
Identities = 36/189 (19%), Positives = 75/189 (39%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 VNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTA 181
V D+ + FADD + +++ + A A+ W +++ PAK+
Sbjct: 664 VLDVQLPEGAEIIAFADDLLLLDPGITPEAASQRAEEAVSAVNLWMENHCLELAPAKTEL 723
Query: 182 VLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDR 361
V N+ P+ + R ++YLGV +D ++++ H++ +
Sbjct: 724 VTISSKRQG---------NINVPVVINGVERRTTRSIRYLGVVIDNQLSWKSHVEYCTTK 774
Query: 362 AAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQ--S 535
A L ++ S K L + + ++ YA+ V+ H A + + + LQ
Sbjct: 775 ALRTAKALGCLMRNHSGPKCA-KRRLLASVVDSILRYAAPVW-HEATKNQECRRMLQRVQ 832
Query: 536 RFCRLAVGA 562
+ C + V +
Sbjct: 833 KHCAIKVSS 841
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 37.9 bits (84), Expect = 2e-04
Identities = 33/153 (21%), Positives = 62/153 (40%)
Frame = +2
Query: 44 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXX 223
FADD + + ++++ + QW + +N +K+ +L
Sbjct: 642 FADDIVLVAVGSRIDDLENTIETSINIIRQWMESVELQLNISKTEYILVSSHRSRQESQ- 700
Query: 224 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICK 403
I + +I +R +KYLG+ +D + + HIK V +RA L M+
Sbjct: 701 ---------IIVEGHTIRSSRHLKYLGIMIDDRLEYTQHIKYVAERAVTNTNALVRMMPN 751
Query: 404 RSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 502
RS + + T I + YAS ++A + +
Sbjct: 752 RSGPRSSRRRIIANTIIAGI-RYASSIWAESLK 783
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 35.1 bits (77), Expect = 0.002
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 281 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRP 460
+R +KYLG+ LD + + HI+ +RA + L M+ ++ S + + T +
Sbjct: 706 SRTLKYLGMVLDDRLEYTSHIRYAVERATKLWTTLVRMMPNKAGPSSNVRRVIALTVVAK 765
Query: 461 VMTYASVVFAHAAR 502
V YAS ++ H R
Sbjct: 766 V-RYASPIWCHTLR 778
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 32.7 bits (71), Expect = 0.009
Identities = 29/151 (19%), Positives = 59/151 (39%)
Frame = +2
Query: 44 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXX 223
+ADD V A + A A+ W + + P K+ V+
Sbjct: 664 YADDIVVMARGCTPQEAALVAEQAVDAIAAWMEDHHLQLAPEKTEGVMISSLRRG----- 718
Query: 224 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICK 403
L P + I + ++YLGV + ++++PH++ +A ++G + ++
Sbjct: 719 ----QLKVPFRVGDTIIHSKQSIRYLGVQIHDHLSWKPHVELSTAKALRVVGVVTAVMRN 774
Query: 404 RSKMSLRNKVTLYKTCIRPVMTYASVVFAHA 496
S + K L ++ YA+ V++ A
Sbjct: 775 HSGPQVA-KRRLLAAVAESIIRYAAPVWSEA 804
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 29.5 bits (63), Expect = 0.088
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Frame = +2
Query: 284 RKVKYLGVTLDASMTFRPHIKSVRD---RAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 454
R +KYLGV +D + F+ H++ +A L P I S+R L+ C
Sbjct: 764 RSLKYLGVVIDDRLKFKSHLEEACKKVMKAINALAAFTPNIGGPCS-SIRR---LHANCA 819
Query: 455 RPVMTYASVVFAH--AARTHIDTLQSLQSRFCRLAVGA 562
V+ Y + V+AH + H +T+ + + A
Sbjct: 820 ISVLRYGAPVWAHILKEKQHQNTVNKVHRKLAMRVTSA 857
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 28.7 bits (61), Expect = 0.15
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 251 ITLFSQSIPWARKVKYLGVTLDASMTFRPHIK 346
I + + I R +KYLGV +D ++FR H++
Sbjct: 692 IRVGDERIESIRHLKYLGVIIDDRLSFRKHVE 723
>Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein
protein.
Length = 192
Score = 25.4 bits (53), Expect = 1.4
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 98 KKLQSAALALGQWFRKWRIDINPAKSTAVL 187
KK L +G +FR WR I+ K A +
Sbjct: 73 KKFTIGTLGVGSFFRAWRNCIDEGKGLATI 102
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 25.4 bits (53), Expect = 1.4
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 248 PITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 364
PI + I + ++YLGV + +RPH+ ++A
Sbjct: 720 PIRVGGLEIRSKQAIRYLGVMIHDHFLWRPHVTMAVEKA 758
>AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsive
protein 2 protein.
Length = 439
Score = 25.0 bits (52), Expect = 1.9
Identities = 12/55 (21%), Positives = 19/55 (34%)
Frame = -2
Query: 298 VLDLPGPGYGLTKESNRGCEIPPPNTGGNPCGASPLKEHRSTFRWVDVYAPFSEP 134
++ +P G G + G PP P P + + W +V A P
Sbjct: 293 IVSIPTFGRGWKMNGDSGITGVPPLPADGPSNPGPQTQTEGFYSWAEVCAMLPNP 347
>AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 4.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 290 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 388
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 4.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 290 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 388
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 23.4 bits (48), Expect = 5.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 316 IQGNAQVLDLPGPG 275
+ GN QV + PGPG
Sbjct: 220 LDGNVQVREAPGPG 233
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.0 bits (47), Expect = 7.6
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 269 SIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 385
SI +KYLGV L H++ V ++A+ I L
Sbjct: 719 SIQSTETLKYLGVDLCRKQHHSRHLERVANKASRITNAL 757
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,502
Number of Sequences: 2352
Number of extensions: 15984
Number of successful extensions: 51
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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