Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1093
(602 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 125 4e-29
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 123 2e-28
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 123 2e-28
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 112 3e-25
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 112 3e-25
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 112 3e-25
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 103 2e-22
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 101 8e-22
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 101 8e-22
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 72 7e-13
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 72 7e-13
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 72 7e-13
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 72 7e-13
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 62 7e-10
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 58 7e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 58 7e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 58 7e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 58 7e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 58 7e-09
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 56 5e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 47 2e-05
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 40 0.002
AE014296-3472|AAS65085.1| 558|Drosophila melanogaster CG33486-P... 32 0.69
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 31 1.2
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 31 1.6
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 4.9
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 125 bits (302), Expect = 4e-29
Identities = 68/189 (35%), Positives = 95/189 (50%)
Frame = +2
Query: 35 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 214
LA FADD V Y SR + A +Q A +W R+W I IN +KS V F
Sbjct: 671 LATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKR---- 726
Query: 215 XXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 394
PP+ + +P KYLGV LD +TF H+ +R R + + Y +
Sbjct: 727 -------RTPPPVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWL 779
Query: 395 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFV 574
+ RSK+SL NK+T+YK + P Y ++ A +HI +Q++Q++ RL G WFV
Sbjct: 780 LSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFV 839
Query: 575 RNVDLHDDL 601
RN LH DL
Sbjct: 840 RNTTLHRDL 848
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 123 bits (297), Expect = 2e-28
Identities = 64/196 (32%), Positives = 104/196 (53%)
Frame = +2
Query: 5 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 184
+DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP K+ A+
Sbjct: 682 HDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAI 741
Query: 185 LFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 364
F L PI W ++YLG+ D +TF+ HI + +
Sbjct: 742 FFTKRRKPRYLPDRQLRILDSPIQ-------WVDNIRYLGIIFDKKLTFKYHINNTIMKV 794
Query: 365 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFC 544
I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++
Sbjct: 795 NKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLL 854
Query: 545 RLAVGAPWFVRNVDLH 592
+L + P++ LH
Sbjct: 855 KLIMNLPYYTNTKYLH 870
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 123 bits (297), Expect = 2e-28
Identities = 64/196 (32%), Positives = 104/196 (53%)
Frame = +2
Query: 5 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 184
+DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP K+ A+
Sbjct: 630 HDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAI 689
Query: 185 LFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 364
F L PI W ++YLG+ D +TF+ HI + +
Sbjct: 690 FFTKRRKPRYLPDRQLRILDSPIQ-------WVDNIRYLGIIFDKKLTFKYHINNTIMKV 742
Query: 365 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFC 544
I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++
Sbjct: 743 NKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLL 802
Query: 545 RLAVGAPWFVRNVDLH 592
+L + P++ LH
Sbjct: 803 KLIMNLPYYTNTKYLH 818
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 112 bits (270), Expect = 3e-25
Identities = 66/198 (33%), Positives = 98/198 (49%)
Frame = +2
Query: 8 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 187
D P + FADDT + S+ L ++ +W WRI IN K V
Sbjct: 653 DFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVT 712
Query: 188 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 367
F PP+ L + IP A +V YLGV LD +T+R HI++
Sbjct: 713 FTLNK-----------QTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLK 761
Query: 368 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 547
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q QSR R
Sbjct: 762 LKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILR 821
Query: 548 LAVGAPWFVRNVDLHDDL 601
+ GAPW++RN ++H DL
Sbjct: 822 IITGAPWYLRNENIHRDL 839
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 112 bits (270), Expect = 3e-25
Identities = 64/198 (32%), Positives = 103/198 (52%)
Frame = +2
Query: 8 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 187
DIP + ++ FADDT + SR+ +L + + +W WRI +N K V
Sbjct: 655 DIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVT 714
Query: 188 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 367
F PP+ L S +P A +V YLGV LD +T+R HI++ + +
Sbjct: 715 FTLNRQDC-----------PPLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLK 763
Query: 368 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 547
L+ +I S +SL +KV LY + ++P+ TY S ++ +A+ ++ID +Q QS+ R
Sbjct: 764 LKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILR 823
Query: 548 LAVGAPWFVRNVDLHDDL 601
GAPW+VR+ ++ DL
Sbjct: 824 TITGAPWYVRSENIQRDL 841
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 112 bits (270), Expect = 3e-25
Identities = 66/198 (33%), Positives = 98/198 (49%)
Frame = +2
Query: 8 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 187
D P + FADDT + S+ L ++ +W WRI IN K V
Sbjct: 653 DFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVT 712
Query: 188 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 367
F PP+ L + IP A +V YLGV LD +T+R HI++
Sbjct: 713 FTLNK-----------QTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLK 761
Query: 368 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 547
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q QSR R
Sbjct: 762 LKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILR 821
Query: 548 LAVGAPWFVRNVDLHDDL 601
+ GAPW++RN ++H DL
Sbjct: 822 IITGAPWYLRNENIHRDL 839
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 103 bits (247), Expect = 2e-22
Identities = 59/189 (31%), Positives = 95/189 (50%)
Frame = +2
Query: 35 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 214
LA +ADD + YSS + A+ LQ L W ++W + +NP K+ F
Sbjct: 675 LATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSP- 733
Query: 215 XXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 394
+T PI L + + KYLG+TLD +TF PH+K+ R + +L +
Sbjct: 734 --------VTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWL 785
Query: 395 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFV 574
+ ++S M+LR K +Y C+ P+ Y ++ AA+++ + +Q LQ+R R P++V
Sbjct: 786 LNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYV 845
Query: 575 RNVDLHDDL 601
R LH DL
Sbjct: 846 RGTTLHRDL 854
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 101 bits (242), Expect = 8e-22
Identities = 59/189 (31%), Positives = 94/189 (49%)
Frame = +2
Query: 35 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 214
+A +ADDT V S++ LQ A QW W + IN K V F
Sbjct: 676 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSC- 734
Query: 215 XXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 394
P ++L + I + KYLG+TLD +TF HI +++ + R+ +
Sbjct: 735 ----------PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWL 784
Query: 395 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFV 574
I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R GAPW++
Sbjct: 785 IAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYM 844
Query: 575 RNVDLHDDL 601
R D+ DL
Sbjct: 845 RTRDIERDL 853
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 101 bits (242), Expect = 8e-22
Identities = 59/189 (31%), Positives = 94/189 (49%)
Frame = +2
Query: 35 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 214
+A +ADDT V S++ LQ A QW W + IN K V F
Sbjct: 478 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSC- 536
Query: 215 XXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 394
P ++L + I + KYLG+TLD +TF HI +++ + R+ +
Sbjct: 537 ----------PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWL 586
Query: 395 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFV 574
I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R GAPW++
Sbjct: 587 IAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYM 646
Query: 575 RNVDLHDDL 601
R D+ DL
Sbjct: 647 RTRDIERDL 655
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 71.7 bits (168), Expect = 7e-13
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 3/195 (1%)
Frame = +2
Query: 14 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 187
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 275 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 334
Query: 188 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 367
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 335 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 386
Query: 368 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 544
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 387 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 446
Query: 545 RLAVGAPWFVRNVDL 589
R + A + R D+
Sbjct: 447 RRIINASRYTRQADI 461
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 71.7 bits (168), Expect = 7e-13
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 3/195 (1%)
Frame = +2
Query: 14 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 187
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 188 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 367
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 368 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 544
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 834 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 893
Query: 545 RLAVGAPWFVRNVDL 589
R + A + R D+
Sbjct: 894 RRIINASRYTRQADI 908
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 71.7 bits (168), Expect = 7e-13
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 3/195 (1%)
Frame = +2
Query: 14 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 187
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 188 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 367
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 368 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 544
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 834 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 893
Query: 545 RLAVGAPWFVRNVDL 589
R + A + R D+
Sbjct: 894 RRIINASRYTRQADI 908
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 71.7 bits (168), Expect = 7e-13
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 3/195 (1%)
Frame = +2
Query: 14 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 187
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 188 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 367
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 368 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 544
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 834 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 893
Query: 545 RLAVGAPWFVRNVDL 589
R + A + R D+
Sbjct: 894 RRIINASRYTRQADI 908
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 61.7 bits (143), Expect = 7e-10
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 4/199 (2%)
Frame = +2
Query: 11 IPRSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTA 181
I R PT L+ +ADDT V S + + ++ W KW I +N AK+
Sbjct: 721 IYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGH 780
Query: 182 VLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDR 361
V+F + + Q+I K YLGVTLD+ +T H+ + +
Sbjct: 781 VIFTLKNDLPTNSMN--------VKIKGQTIKKESKQSYLGVTLDSKLTLSSHVTKLLGK 832
Query: 362 AAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSR 538
+ +L ++ RSK+ + K+ + K+ + P+ YA + I +Q ++R
Sbjct: 833 YSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYAIAAWGPLVTDAQIRRVQVEENR 892
Query: 539 FCRLAVGAPWFVRNVDLHD 595
R A + RN + D
Sbjct: 893 KIRDICRAGRYTRNQTIRD 911
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 58.4 bits (135), Expect = 7e-09
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 1/188 (0%)
Frame = +2
Query: 35 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 214
L+ +ADDT V S + + ++ W KW I +N AK+ V++
Sbjct: 604 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 663
Query: 215 XXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 394
NL + + Q+I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 664 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 715
Query: 395 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWF 571
+ +RSK+ K+ + K+ + P+ YA + I +Q ++R R A +
Sbjct: 716 LNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRY 775
Query: 572 VRNVDLHD 595
+N + D
Sbjct: 776 TKNQTIRD 783
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.4 bits (135), Expect = 7e-09
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 1/188 (0%)
Frame = +2
Query: 35 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 214
L+ +ADDT V S + + ++ W KW I +N AK+ V++
Sbjct: 720 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 779
Query: 215 XXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 394
NL + + Q+I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 780 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 831
Query: 395 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWF 571
+ +RSK+ K+ + K+ + P+ YA + I +Q ++R R A +
Sbjct: 832 LNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRY 891
Query: 572 VRNVDLHD 595
+N + D
Sbjct: 892 TKNQTIRD 899
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.4 bits (135), Expect = 7e-09
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 1/188 (0%)
Frame = +2
Query: 35 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 214
L+ +ADDT V S + + ++ W KW I +N AK+ V++
Sbjct: 720 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 779
Query: 215 XXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 394
NL + + Q+I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 780 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 831
Query: 395 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWF 571
+ +RSK+ K+ + K+ + P+ YA + I +Q ++R R A +
Sbjct: 832 LNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRY 891
Query: 572 VRNVDLHD 595
+N + D
Sbjct: 892 TKNQTIRD 899
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 58.4 bits (135), Expect = 7e-09
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 1/188 (0%)
Frame = +2
Query: 35 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 214
L+ +ADDT V S + + ++ W KW I +N AK+ V++
Sbjct: 682 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 741
Query: 215 XXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 394
NL + + Q+I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 742 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 793
Query: 395 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWF 571
+ +RSK+ K+ + K+ + P+ YA + I +Q ++R R A +
Sbjct: 794 LNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRY 853
Query: 572 VRNVDLHD 595
+N + D
Sbjct: 854 TKNQTIRD 861
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.4 bits (135), Expect = 7e-09
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 1/188 (0%)
Frame = +2
Query: 35 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 214
L+ +ADDT V S + + ++ W KW I +N AK+ V++
Sbjct: 720 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 779
Query: 215 XXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 394
NL + + Q+I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 780 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 831
Query: 395 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWF 571
+ +RSK+ K+ + K+ + P+ YA + I +Q ++R R A +
Sbjct: 832 LNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRY 891
Query: 572 VRNVDLHD 595
+N + D
Sbjct: 892 TKNQTIRD 899
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 55.6 bits (128), Expect = 5e-08
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Frame = +2
Query: 11 IPRSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTA 181
I R PT L+ +ADDT V S + + ++ + W KW I +N AK+
Sbjct: 709 IYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGH 768
Query: 182 VLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDR 361
V+F + + Q I K YLGV LD+ +T H+ + +
Sbjct: 769 VIFTLKNDLPTSLRT--------MKIKGQVIKIESKQSYLGVILDSKLTLSSHVTKLMGK 820
Query: 362 AAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYA 475
++ ++ +RSK+ + K+ + K+ + P+ YA
Sbjct: 821 YTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYA 858
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/85 (27%), Positives = 43/85 (50%)
Frame = +2
Query: 245 PPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 424
P + +++P+ R +YLG+T+ M F HI S+R R ++G L ++ S R
Sbjct: 719 PTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPR 778
Query: 425 NKVTLYKTCIRPVMTYASVVFAHAA 499
+ T+Y + P + + + V+ A
Sbjct: 779 ARRTIYDGLMAPCVLFGAPVWYDTA 803
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 266 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 445
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 446 TCIRPVMTYA 475
+ + P+ YA
Sbjct: 64 SVLSPIWQYA 73
>AE014296-3472|AAS65085.1| 558|Drosophila melanogaster CG33486-PA
protein.
Length = 558
Score = 31.9 bits (69), Expect = 0.69
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 442 QNLHKARHDLRECGVRSRGPHAHRHP 519
Q LH ++H LRE R G H HR P
Sbjct: 18 QILHGSKHSLRELAYRQSGKHRHRGP 43
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/97 (20%), Positives = 44/97 (45%)
Frame = +2
Query: 272 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTC 451
IP +K LG+TL+ + HI + + L + + + + + + K
Sbjct: 731 IPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKAT 790
Query: 452 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGA 562
I + Y ++ HA ++ ++ +++ + RLA+GA
Sbjct: 791 IIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/107 (20%), Positives = 40/107 (37%)
Frame = +2
Query: 44 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXX 223
FADD + + + A+ W +++ P K+ AVL
Sbjct: 83 FADDVALLVVDKYPGKAEEMCNRNIRAIEHWLSSMGLELAPEKTKAVLISSRKAVE---- 138
Query: 224 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 364
T + + + +R +KYL V +D ++FR H+ +A
Sbjct: 139 ------TATVEVGGTLVSSSRAIKYLEVMIDTRLSFREHLAYASSKA 179
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 281 ARKVKYLGVTLDASMTFRPHIKSVRDRAAF---ILGRLYPMI 397
A +KYLGV +D ++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,846,096
Number of Sequences: 53049
Number of extensions: 710289
Number of successful extensions: 1918
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1898
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -