Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1082
(527 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0102 + 8414109-8414505,8416172-8416227 32 0.33
07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993 30 1.3
03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169 30 1.3
02_03_0167 - 15923872-15925683 30 1.3
01_06_1222 - 35499069-35499287,35500319-35501734 30 1.3
07_01_0408 - 3137705-3138017,3139361-3139371,3140693-3140770,314... 29 1.7
06_03_1385 - 29799166-29799522 29 1.7
02_02_0315 + 8872199-8872815,8873141-8873243,8873346-8873405,887... 29 1.7
11_01_0538 + 4265540-4265896 29 2.3
10_08_0738 - 20212220-20212282,20212387-20212593,20212690-202128... 29 2.3
02_04_0451 + 23021139-23021269,23021366-23021498,23021594-230217... 29 2.3
01_01_0539 + 3952039-3952219,3952295-3952984,3953115-3953191,395... 29 2.3
11_01_0344 + 2558950-2558971,2560389-2560465,2560543-2560833 29 3.1
10_01_0270 - 2876907-2877547,2877838-2878012 29 3.1
06_02_0349 + 15032131-15033117 29 3.1
04_04_0776 - 28000220-28000337,28000760-28000872,28001194-280012... 29 3.1
08_01_0664 + 5741111-5741113,5741491-5741658,5741741-5741864,574... 28 4.0
04_01_0471 + 6099768-6100094,6100384-6100416 28 4.0
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880... 28 4.0
07_01_1055 - 9253936-9254130,9254271-9254483,9254588-9254758,925... 27 7.1
03_02_0584 - 9650996-9651488,9651630-9652049,9652129-9652158,965... 27 7.1
01_06_0451 - 29476892-29477516,29477600-29477843,29478313-294787... 27 7.1
01_05_0024 - 17262504-17263308,17264251-17264399,17264879-172649... 27 7.1
09_06_0144 + 21149338-21150651 27 9.3
07_01_0303 - 2171796-2172611,2173133-2174062,2174659-2175132,217... 27 9.3
03_04_0169 - 17959262-17959304,17959441-17959532,17959682-179597... 27 9.3
03_02_0933 - 12505196-12505286,12505759-12505814,12508780-125088... 27 9.3
>05_03_0102 + 8414109-8414505,8416172-8416227
Length = 150
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 438 TCDRRCGDPRRNMRT-HTSREHGLRHDRNVRR 346
TC++R RRN+ H R HG HD N R+
Sbjct: 107 TCEKRQAQQRRNIAAAHAMRPHGRGHDLNFRK 138
>07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993
Length = 678
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -3
Query: 420 GDPRRNMRTHTSREHGLRHDRNVRRQLESQRGARLEHVAQG*SVGLLAKHVYTKNVPRGR 241
G+P H ++ ++RNVR +S G L +A S LAKH T+ V GR
Sbjct: 59 GEPNIPENDHVYKKIEKAYNRNVRDNSKSTGGVTLPSIAS--SEERLAKHNNTEKVTNGR 116
>03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169
Length = 515
Score = 29.9 bits (64), Expect = 1.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 112 WEDTAWPWPSSITPPWQIAK 53
W+D WPSS + PW++ K
Sbjct: 227 WQDVLLLWPSSSSSPWELTK 246
>02_03_0167 - 15923872-15925683
Length = 603
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = -1
Query: 455 HGFRVGLVI-AGVGILDGI*ELILRGSMVFDMIGMFDGNWNRSVVHDWSMLHRAEVL--D 285
+GF V + AG+ +L+ + +++RGS + +FDG N+SVV W+ L +L D
Sbjct: 177 YGFSVKSGLDAGLPVLNSVLTMLVRGSHLDAARLLFDGICNKSVV-TWTALASGYLLRGD 235
Query: 284 YWRSMYIRRMFHGGGVN 234
Y + G G N
Sbjct: 236 YLEVFDLFNRMRGVGKN 252
>01_06_1222 - 35499069-35499287,35500319-35501734
Length = 544
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 278 ASSPTLQPCATCSSRAPRCDSNCRRTFRSCRRPCSR 385
+S+P PC C++ + + C ++ S RRPC+R
Sbjct: 7 SSTPLFSPC--CAAATAKLGAACPSSYGSRRRPCTR 40
>07_01_0408 -
3137705-3138017,3139361-3139371,3140693-3140770,
3141105-3141206,3141309-3141380,3141484-3141558
Length = 216
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 180 AAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAA 335
AA + H P+I+ A P AA + +H PV++ +P A AA
Sbjct: 9 AAAIAPHLVPVIRGATPFAPAAATAAAISLHLVPVIRGATPFSSAVAAAAAA 60
>06_03_1385 - 29799166-29799522
Length = 118
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 515 PCGWNHQAGVESIRLSRHHHHGFRVGLVIAGV-GILDG 405
PCG +H V+ I + HHHG G AG G+L G
Sbjct: 63 PCGVDHFRRVQGIIHHQKHHHGGSHGAGGAGAGGLLSG 100
>02_02_0315 +
8872199-8872815,8873141-8873243,8873346-8873405,
8873558-8873632,8873718-8873792,8873876-8873956,
8874466-8874657,8874762-8874947,8875047-8875094
Length = 478
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +3
Query: 165 PVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAP 317
P ++ AAP AAP A AAPVE +S A SP + P
Sbjct: 353 PAITEAAPATAEAAPAAATATAAPPAAPVEETSTEAAPAEPTPLSPYTNYP 403
>11_01_0538 + 4265540-4265896
Length = 118
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 272 CFASSPTL-QPCATCSSRAPRCDSNCRRTFR 361
C S TL +P A C SR P C C+ FR
Sbjct: 58 CPPGSATLCRPLAGCRSRIPACRIKCKSVFR 88
>10_08_0738 -
20212220-20212282,20212387-20212593,20212690-20212819,
20212919-20213089,20213311-20213433,20213517-20213618,
20214123-20214880
Length = 517
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 109 EDTAWPWPSSITPPWQIAKIEQTTAIL 29
E WP P S PP ++ K EQT ++
Sbjct: 136 EAARWPPPPSFQPPIEVIKAEQTAPLI 162
>02_04_0451 +
23021139-23021269,23021366-23021498,23021594-23021789,
23023376-23023737,23024049-23024363
Length = 378
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +2
Query: 110 PKHSPP*RAFSSSNGTLYPSIESCCSCTDSRSPFDXXXXXXXXXXPRGTFFVYT-CF 277
P+ P R FSS N L P S SR PRG FF ++ C+
Sbjct: 322 PEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFFCFSQCY 378
>01_01_0539 +
3952039-3952219,3952295-3952984,3953115-3953191,
3953356-3953931
Length = 507
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/92 (23%), Positives = 30/92 (32%)
Frame = +3
Query: 81 DEGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHS 260
DE H + R PS TP L + Q AGP ++ A
Sbjct: 309 DEVKSHLQKYRLHTRRPMPSPAPPTAATPQLVVLGGIWVPPEYATQAAGPAIYGAHPATQ 368
Query: 261 SYIHASPVVQHFSPVQHAPVVHHAAIPIAVEH 356
+ A+ Q + H + HH A V H
Sbjct: 369 PHYTAAVAAQEYYHHHHHHLQHHPAAAALVHH 400
>11_01_0344 + 2558950-2558971,2560389-2560465,2560543-2560833
Length = 129
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = -1
Query: 290 LDYWRSMYIRRMFHGGGV----NNRTGMLNQRGCVSQYRSSMTQYWGIMCRCLMRR 135
LD+WR +RR+ G V G+L Q G + + Q G +CRCL R
Sbjct: 32 LDWWRCARVRRLSVRGDVADADGGEDGVLGQAGGARLHGAIRVQD-GEVCRCLQLR 86
>10_01_0270 - 2876907-2877547,2877838-2878012
Length = 271
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +3
Query: 174 SHAAPVLTHAAP-LIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAV 350
S AP H P H P V++ P +Y H +PV + P P+ H A V
Sbjct: 174 SPPAPAAYHKPPPSYTHPAPPVYSYPTP--AYSHPTPVYKQPLPTPSPPIYHPPAEEKKV 231
Query: 351 EHSDHVE 371
D E
Sbjct: 232 AMQDDAE 238
>06_02_0349 + 15032131-15033117
Length = 328
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/57 (26%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +2
Query: 203 SPFDXXXXXXXXXXPRGTFFVYTCFASSPTLQPC-ATCSSRAPRCDSNCRRTFRSCR 370
+PF PR + + C ++P A C RCDS C CR
Sbjct: 105 APFSLDTSTRFSLSPRNDYLFFDCDEERVIVEPRPAVCDRYPERCDSTCDSAGYLCR 161
>04_04_0776 -
28000220-28000337,28000760-28000872,28001194-28001289,
28001647-28001763,28002136-28002267,28002348-28002524,
28002660-28002837,28003270-28003373,28003922-28003996
Length = 369
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 9 RHLNMFFKIAVVCSILAICQGGVI 80
RH+ + + A VC +A+C+GG +
Sbjct: 22 RHVQILKRSAAVCGAVAVCRGGAV 45
>08_01_0664 +
5741111-5741113,5741491-5741658,5741741-5741864,
5742078-5742169,5742254-5742352,5742476-5742589,
5743190-5743254,5743342-5743467,5743870-5743945,
5744502-5744594,5744944-5744994,5745084-5745182
Length = 369
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -3
Query: 471 FTTSPSRVSCWTCDRRCGDPRRNMRTHTSREHG 373
FT P V CW R+ P+ HT E G
Sbjct: 283 FTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERG 315
>04_01_0471 + 6099768-6100094,6100384-6100416
Length = 119
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 44 LLDFGYLPRWCYRRGPRPC-CVFPKH 118
+L+F +LPR RRG R C V P H
Sbjct: 67 VLNFAFLPRTSLRRGARACRIVVPHH 92
>03_05_0825 -
27986393-27986767,27987541-27987625,27987936-27988036,
27988144-27988227,27988868-27988939,27989203-27989319,
27989386-27989526,27989951-27990122,27990324-27990372,
27990773-27990821,27991240-27991270,27991301-27991371
Length = 448
Score = 28.3 bits (60), Expect = 4.0
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Frame = -3
Query: 411 RRNMRTHTSREHGLRHDRNVRRQLESQRGARLEHVAQG*S-VGLLAKHVYTKNV---PRG 244
RR T ++ ++ NV RQLE + AR G S + + K + T P+
Sbjct: 333 RRAELTQFQKQVEEQYMSNVERQLERMQNARNARRGNGPSNMQEMDKELDTHRAEHGPKT 392
Query: 243 RREQQDRHVESKGLRESVQEQH--DSILGYNVPLLDEKAR 130
RR + + + + + E D +LG N P+ DE+ +
Sbjct: 393 RRVLEGGNDDEDDMDDMAVEDELMDEVLGINEPISDEQTK 432
>07_01_1055 -
9253936-9254130,9254271-9254483,9254588-9254758,
9255743-9255859,9257021-9257186,9258885-9258934,
9259095-9259268
Length = 361
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 18 NMFFKIAVVCSILAICQGGVIDEGHGHAVSSQSIVRHDEPS-HQATAHYTPVLSHAAP 188
N+F I +C I + + GV E + VS +S+ R S + H+ LS P
Sbjct: 66 NLFGFIGAICLIFVVTKAGVDAENSSNVVSVRSVKRDQICSPTRPDRHWVQTLSLLVP 123
>03_02_0584 -
9650996-9651488,9651630-9652049,9652129-9652158,
9652201-9652287,9652657-9653669,9653832-9654854,
9654946-9654969
Length = 1029
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -3
Query: 282 LAKHVYTKNVPRGRREQQDRHVESKGLRESVQEQHDSILGYNVPLLDEKARHGGL 118
+ H+ T N P G ++ +S G ++Q++HDS N + K G+
Sbjct: 566 IVSHLSTTNKPHGGTLGNNQTSDSMGSGRNLQKEHDSNTHQNCSFVTNKIDMQGI 620
>01_06_0451 -
29476892-29477516,29477600-29477843,29478313-29478714,
29481164-29481358,29481418-29481537,29481615-29481683,
29481901-29481999,29483857-29483946,29484049-29484180,
29485062-29485173
Length = 695
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +3
Query: 294 FSPVQHAPVVHHA-AIPIAV---EHSDHV--EDHAPAKYEFSYSVEDPHTGDHKSNTK 449
+SP ++P +H IP+A +HS ++ H P K F PH D+ S TK
Sbjct: 171 YSP-SNSPSIHRKHGIPVAAPPKQHSSNLPPSHHRPHKGSFPVISPTPHKADNASATK 227
>01_05_0024 -
17262504-17263308,17264251-17264399,17264879-17264978,
17265829-17265953,17267565-17267743,17269648-17270698
Length = 802
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 158 MCRCLMRRLVMADYALGRHSMAVALVYNTTLANSQNRA 45
+CRC RR +MAD R++ A A T L S A
Sbjct: 14 VCRCRDRRKLMADAVQARNAFAAAHSAYTVLLKSTGGA 51
>09_06_0144 + 21149338-21150651
Length = 437
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 312 APVVHHAAIPIAVEHSDHVE-DHAPAKYEFSYSVEDPH 422
AP VHH A S HVE DH +Y + +D H
Sbjct: 177 APPVHHHAALFKPRPSPHVEHDHRNREYYLPAAGDDSH 214
>07_01_0303 -
2171796-2172611,2173133-2174062,2174659-2175132,
2175569-2175609,2176298-2176337
Length = 766
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 346 PSNIPIMSKTMLPRSMSSHIPSRIPTPAITSPTRN 450
P+NIP+ +P M +++P+ +P + S N
Sbjct: 576 PANIPVNLPANVPPEMPANLPANVPPEMLASLPAN 610
>03_04_0169 -
17959262-17959304,17959441-17959532,17959682-17959759,
17959938-17960075,17960174-17960302,17960556-17960685,
17960797-17960974,17961177-17961315,17961399-17961488,
17961633-17961794,17961966-17962130,17962250-17962387,
17962827-17963006,17963405-17963533,17963878-17964113,
17964233-17964395,17965260-17965628,17965724-17965828
Length = 887
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 245 GGVNNRTGMLNQRGCVSQYRSSMTQYWGIMC 153
GG+N G+L RG ++ + + + + WG C
Sbjct: 451 GGMNAAAGILTARGGMTSHAAVVARGWGKCC 481
>03_02_0933 -
12505196-12505286,12505759-12505814,12508780-12508873,
12508949-12509079,12509187-12509290,12509585-12509680,
12510752-12510860,12511252-12511296
Length = 241
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 258 SSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDH 377
S Y H V + V P H + P++ E+ H+ED+
Sbjct: 21 SLYQHCETVGRTIHMVNLDPAAEHFSYPVSTENHRHLEDN 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,482,190
Number of Sequences: 37544
Number of extensions: 434752
Number of successful extensions: 1602
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1597
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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