Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1077
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006701-4|AAK68403.2| 606|Caenorhabditis elegans Hypothetical ... 63 2e-10
AF144639-1|AAD44756.1| 552|Caenorhabditis elegans sphingosine-1... 42 4e-04
AF100673-6|AAC69001.1| 552|Caenorhabditis elegans Sphingosine p... 42 4e-04
U50312-4|AAA92321.1| 542|Caenorhabditis elegans Temporarily ass... 38 0.008
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 34 0.099
AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical... 34 0.099
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 34 0.099
Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 29 2.8
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 29 2.8
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 2.8
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 2.8
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 2.8
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 2.8
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 2.8
AF016439-4|AAV28339.1| 489|Caenorhabditis elegans Hypothetical ... 28 4.9
AC006603-2|AAF39746.2| 507|Caenorhabditis elegans Hypothetical ... 27 8.6
>AC006701-4|AAK68403.2| 606|Caenorhabditis elegans Hypothetical
protein Y104H12D.3 protein.
Length = 606
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/102 (31%), Positives = 55/102 (53%)
Frame = +2
Query: 233 GKEPWQIVSMTASSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEI 412
G EPWQIVS S I ++ + + E V++RK F +LR +P VR+K+E +A+
Sbjct: 34 GLEPWQIVSYAISLCFLIAYIKRMTRSNEPPLVQIRKSIFSFLRSLPWVRRKLEADLAKA 93
Query: 413 KKDFHTDVEKRLAGVTIRRELPEQGLDPEQISQEVRDHLNLG 538
+ + +V + + LPE+ +D E+I + R + +G
Sbjct: 94 QAEIEDEVHQSDHMREFYKFLPERCMDTEEILADGRRYAMMG 135
>AF144639-1|AAD44756.1| 552|Caenorhabditis elegans
sphingosine-1-phosphate lyase protein.
Length = 552
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +2
Query: 293 VHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRLAGVTIRRE 472
VH + + + R+ F LR++P VR KIE+++A K + K
Sbjct: 49 VHLYRKSEDPILKRMGAYVFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKDKQFIST 108
Query: 473 LPEQGLDPEQISQEVRDHLNLGAYDWKNGAVSGAVY 580
LP L + I + + + + ++ G VSGAVY
Sbjct: 109 LPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGAVY 144
>AF100673-6|AAC69001.1| 552|Caenorhabditis elegans Sphingosine
phosphate lyase protein1 protein.
Length = 552
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +2
Query: 293 VHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRLAGVTIRRE 472
VH + + + R+ F LR++P VR KIE+++A K + K
Sbjct: 49 VHLYRKSEDPILKRMGAYVFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKDKQFIST 108
Query: 473 LPEQGLDPEQISQEVRDHLNLGAYDWKNGAVSGAVY 580
LP L + I + + + + ++ G VSGAVY
Sbjct: 109 LPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGAVY 144
>U50312-4|AAA92321.1| 542|Caenorhabditis elegans Temporarily
assigned gene nameprotein 38 protein.
Length = 542
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/118 (20%), Positives = 53/118 (44%)
Frame = +2
Query: 242 PWQIVSMTASSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKD 421
P +VS T + + + ++ + RL FF +++VP +RK I++++ E+K +
Sbjct: 24 PIVLVSSTIVATYVLTNLRHMHLDEMGIRKRLSTWFFTTVKRVPFIRKMIDKQLNEVKDE 83
Query: 422 FHTDVEKRLAGVTIRRELPEQGLDPEQISQEVRDHLNLGAYDWKNGAVSGAVYHLCED 595
+ +P + ++ + + +L + G VSGAV++ +D
Sbjct: 84 LEKSLRIVDRSTEYFTTIPSHSVGRTEVLRLAAIYDDLEGPAFLEGRVSGAVFNREDD 141
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 377 VRKKIEQKMAEIKKDFHTDVEKRLAGVTIRRELPEQGLDPEQ 502
+RKK EQK+ E++K HTD E L + + L EQG+ E+
Sbjct: 178 MRKKNEQKLEELRKKLHTDEE--LPWLDHTKTLREQGITEEE 217
>AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical
protein Y71G12B.11b protein.
Length = 996
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 377 VRKKIEQKMAEIKKDFHTDVEKRLAGVTIRRELPEQGLDPEQ 502
+RKK EQK+ E++K HTD E L + + L EQG+ E+
Sbjct: 178 MRKKNEQKLEELRKKLHTDEE--LPWLDHTKTLREQGITEEE 217
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 377 VRKKIEQKMAEIKKDFHTDVEKRLAGVTIRRELPEQGLDPEQ 502
+RKK EQK+ E++K HTD E L + + L EQG+ E+
Sbjct: 178 MRKKNEQKLEELRKKLHTDEE--LPWLDHTKTLREQGITEEE 217
>Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical
protein M162.7 protein.
Length = 690
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 386 KIEQKMAEIKKDFHTDVEKRLAGVTIRRELPEQGLDPEQISQEVRDHLNLGAYDWKN-GA 562
K+ QK+ + +K+F V+ L+ + ++L + D +++ Q ++ NL +N
Sbjct: 426 KLFQKLIDGRKEFTDKVDNELSVIKCFQQLEQDSEDLQKVIQVIQKMRNLDNASVENIKG 485
Query: 563 VSGAVYHLCEDISRV 607
+ V L ++IS+V
Sbjct: 486 IPSVVSELLQNISKV 500
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 269 SSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRL 448
++L A + ++ + T L K R +++ KKI + EI K H D ++ +
Sbjct: 2729 AALGAGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDK-LHADADQIV 2787
Query: 449 AGV-TIRRE-----LPEQGLDPEQISQEVR 520
+ I ++ P Q LDP+Q+S++VR
Sbjct: 2788 GALEAIAKDEALQGAPSQLLDPKQVSEKVR 2817
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 269 SSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRL 448
++L A + ++ + T L K R +++ KKI + EI K H D ++ +
Sbjct: 2729 AALGAGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDK-LHADADQIV 2787
Query: 449 AGV-TIRRE-----LPEQGLDPEQISQEVR 520
+ I ++ P Q LDP+Q+S++VR
Sbjct: 2788 GALEAIAKDEALQGAPSQLLDPKQVSEKVR 2817
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 269 SSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRL 448
++L A + ++ + T L K R +++ KKI + EI K H D ++ +
Sbjct: 2184 AALGAGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDK-LHADADQIV 2242
Query: 449 AGV-TIRRE-----LPEQGLDPEQISQEVR 520
+ I ++ P Q LDP+Q+S++VR
Sbjct: 2243 GALEAIAKDEALQGAPSQLLDPKQVSEKVR 2272
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 269 SSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRL 448
++L A + ++ + T L K R +++ KKI + EI K H D ++ +
Sbjct: 2729 AALGAGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDK-LHADADQIV 2787
Query: 449 AGV-TIRRE-----LPEQGLDPEQISQEVR 520
+ I ++ P Q LDP+Q+S++VR
Sbjct: 2788 GALEAIAKDEALQGAPSQLLDPKQVSEKVR 2817
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 269 SSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRL 448
++L A + ++ + T L K R +++ KKI + EI K H D ++ +
Sbjct: 2729 AALGAGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDK-LHADADQIV 2787
Query: 449 AGV-TIRRE-----LPEQGLDPEQISQEVR 520
+ I ++ P Q LDP+Q+S++VR
Sbjct: 2788 GALEAIAKDEALQGAPSQLLDPKQVSEKVR 2817
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 269 SSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRL 448
++L A + ++ + T L K R +++ KKI + EI K H D ++ +
Sbjct: 2184 AALGAGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDK-LHADADQIV 2242
Query: 449 AGV-TIRRE-----LPEQGLDPEQISQEVR 520
+ I ++ P Q LDP+Q+S++VR
Sbjct: 2243 GALEAIAKDEALQGAPSQLLDPKQVSEKVR 2272
>Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical
protein R10E12.1c protein.
Length = 846
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/97 (22%), Positives = 46/97 (47%)
Frame = +2
Query: 221 KFFDGKEPWQIVSMTASSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQK 400
KF ++ +++S S L + + + + E+ TVR +QF +V R+ +E++
Sbjct: 519 KFESHRQGIELLSKNESELRSSIPGQTAHATGETDTVRQLRQFMSQWNEVTTDRELLEKE 578
Query: 401 MAEIKKDFHTDVEKRLAGVTIRRELPEQGLDPEQISQ 511
+ D D K +A + + E+ + E+I+Q
Sbjct: 579 LKNTNCDIANDFLKAMAE---NQLINEEHISKEKIAQ 612
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/97 (22%), Positives = 46/97 (47%)
Frame = +2
Query: 221 KFFDGKEPWQIVSMTASSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQK 400
KF ++ +++S S L + + + + E+ TVR +QF +V R+ +E++
Sbjct: 519 KFESHRQGIELLSKNESELRSSIPGQTAHATGETDTVRQLRQFMSQWNEVTTDRELLEKE 578
Query: 401 MAEIKKDFHTDVEKRLAGVTIRRELPEQGLDPEQISQ 511
+ D D K +A + + E+ + E+I+Q
Sbjct: 579 LKNTNCDIANDFLKAMAE---NQLINEEHISKEKIAQ 612
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/97 (22%), Positives = 46/97 (47%)
Frame = +2
Query: 221 KFFDGKEPWQIVSMTASSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQK 400
KF ++ +++S S L + + + + E+ TVR +QF +V R+ +E++
Sbjct: 519 KFESHRQGIELLSKNESELRSSIPGQTAHATGETDTVRQLRQFMSQWNEVTTDRELLEKE 578
Query: 401 MAEIKKDFHTDVEKRLAGVTIRRELPEQGLDPEQISQ 511
+ D D K +A + + E+ + E+I+Q
Sbjct: 579 LKNTNCDIANDFLKAMAE---NQLINEEHISKEKIAQ 612
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/97 (22%), Positives = 46/97 (47%)
Frame = +2
Query: 221 KFFDGKEPWQIVSMTASSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQK 400
KF ++ +++S S L + + + + E+ TVR +QF +V R+ +E++
Sbjct: 519 KFESHRQGIELLSKNESELRSSIPGQTAHATGETDTVRQLRQFMSQWNEVTTDRELLEKE 578
Query: 401 MAEIKKDFHTDVEKRLAGVTIRRELPEQGLDPEQISQ 511
+ D D K +A + + E+ + E+I+Q
Sbjct: 579 LKNTNCDIANDFLKAMAE---NQLINEEHISKEKIAQ 612
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 269 SSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRL 448
++L A + ++ + T L K R +++ KKI + EI K H D ++ +
Sbjct: 2729 AALGAGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDK-LHADADQIV 2787
Query: 449 AGV-TIRRE-----LPEQGLDPEQISQEVR 520
+ I ++ P Q LDP+Q+S++VR
Sbjct: 2788 GALEAIAKDEALQGAPSQLLDPKQVSEKVR 2817
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 269 SSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRL 448
++L A + ++ + T L K R +++ KKI + EI K H D ++ +
Sbjct: 2729 AALGAGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDK-LHADADQIV 2787
Query: 449 AGV-TIRRE-----LPEQGLDPEQISQEVR 520
+ I ++ P Q LDP+Q+S++VR
Sbjct: 2788 GALEAIAKDEALQGAPSQLLDPKQVSEKVR 2817
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 269 SSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRL 448
++L A + ++ + T L K R +++ KKI + EI K H D ++ +
Sbjct: 2184 AALGAGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDK-LHADADQIV 2242
Query: 449 AGV-TIRRE-----LPEQGLDPEQISQEVR 520
+ I ++ P Q LDP+Q+S++VR
Sbjct: 2243 GALEAIAKDEALQGAPSQLLDPKQVSEKVR 2272
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 269 SSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRL 448
++L A + ++ + T L K R +++ KKI + EI K H D ++ +
Sbjct: 2729 AALGAGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDK-LHADADQIV 2787
Query: 449 AGV-TIRRE-----LPEQGLDPEQISQEVR 520
+ I ++ P Q LDP+Q+S++VR
Sbjct: 2788 GALEAIAKDEALQGAPSQLLDPKQVSEKVR 2817
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +2
Query: 269 SSLLAIVWVHSLYNARESVTVRLRKQFFRWLRQVPMVRKKIEQKMAEIKKDFHTDVEKRL 448
++L A + ++ + T L K R +++ KKI + EI K H D ++ +
Sbjct: 2729 AALGAGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDK-LHADADQIV 2787
Query: 449 AGV-TIRRE-----LPEQGLDPEQISQEVR 520
+ I ++ P Q LDP+Q+S++VR
Sbjct: 2788 GALEAIAKDEALQGAPSQLLDPKQVSEKVR 2817
>AF016439-4|AAV28339.1| 489|Caenorhabditis elegans Hypothetical
protein R02F11.3b protein.
Length = 489
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 362 RQVPMVRKKIEQKMAEIKKDFHTDVEKRLAGVTI 463
R+ PM R E+K + KKD ++ R+A +T+
Sbjct: 166 RKKPMERTDTEEKSVDEKKDDESNTAARMANITL 199
>AC006603-2|AAF39746.2| 507|Caenorhabditis elegans Hypothetical
protein B0524.3 protein.
Length = 507
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/73 (23%), Positives = 36/73 (49%)
Frame = +2
Query: 164 SEKKSLVMSERPQPLRAINKFFDGKEPWQIVSMTASSLLAIVWVHSLYNARESVTVRLRK 343
S + SL +S++ L+A+N + K+ W+ V A +L + ++ ++ S +R
Sbjct: 62 SPETSLDLSKKDLYLKAVNSIINMKDQWRKVKTFAETLDLSLDLYPCFDISRSTVLRDIN 121
Query: 344 QFFRWLRQVPMVR 382
F L+ V ++
Sbjct: 122 ATFPHLQSVDNIQ 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,343,860
Number of Sequences: 27780
Number of extensions: 285957
Number of successful extensions: 984
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -