Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1076
(580 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 187 6e-48
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 187 6e-48
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 187 6e-48
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 124 5e-29
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 124 5e-29
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 106 1e-23
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 106 1e-23
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 101 3e-22
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 101 3e-22
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 97 1e-20
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 97 1e-20
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 97 1e-20
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 85 3e-17
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 74 8e-14
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 74 8e-14
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 71 6e-13
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 56 1e-08
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 56 1e-08
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 187 bits (455), Expect = 6e-48
Identities = 101/170 (59%), Positives = 122/170 (71%), Gaps = 1/170 (0%)
Frame = +3
Query: 60 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNS-GQVEVTN 236
P++ILK+ R+SSF+GAIAIGDLVKSTLGPKGMDKIL+S S G ++VTN
Sbjct: 3 PVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTN 62
Query: 237 DGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQT 416
DGATILKSIGVDNPAAK+LVDMS QD EVGDGTTSVTV KL+ Q++HPQT
Sbjct: 63 DGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQT 122
Query: 417 IIAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILS 566
II+G+R A A+++L ++S + N +R DL IARTTL SKILS
Sbjct: 123 IISGYRRALGIAQESLKKSSIESGDN-----IRDDLLKIARTTLGSKILS 167
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 187 bits (455), Expect = 6e-48
Identities = 101/170 (59%), Positives = 122/170 (71%), Gaps = 1/170 (0%)
Frame = +3
Query: 60 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNS-GQVEVTN 236
P++ILK+ R+SSF+GAIAIGDLVKSTLGPKGMDKIL+S S G ++VTN
Sbjct: 3 PVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTN 62
Query: 237 DGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQT 416
DGATILKSIGVDNPAAK+LVDMS QD EVGDGTTSVTV KL+ Q++HPQT
Sbjct: 63 DGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQT 122
Query: 417 IIAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILS 566
II+G+R A A+++L ++S + N +R DL IARTTL SKILS
Sbjct: 123 IISGYRRALGIAQESLKKSSIESGDN-----IRDDLLKIARTTLGSKILS 167
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 187 bits (455), Expect = 6e-48
Identities = 101/170 (59%), Positives = 122/170 (71%), Gaps = 1/170 (0%)
Frame = +3
Query: 60 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNS-GQVEVTN 236
P++ILK+ R+SSF+GAIAIGDLVKSTLGPKGMDKIL+S S G ++VTN
Sbjct: 3 PVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTN 62
Query: 237 DGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQT 416
DGATILKSIGVDNPAAK+LVDMS QD EVGDGTTSVTV KL+ Q++HPQT
Sbjct: 63 DGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQT 122
Query: 417 IIAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILS 566
II+G+R A A+++L ++S + N +R DL IARTTL SKILS
Sbjct: 123 IISGYRRALGIAQESLKKSSIESGDN-----IRDDLLKIARTTLGSKILS 167
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 124 bits (299), Expect = 5e-29
Identities = 68/152 (44%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Frame = +3
Query: 111 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKI 290
R + A+AI ++VKS+LGP G+DK+LV + G V VTNDGATILK + V++PA K+
Sbjct: 22 RSQNVTAAVAIANIVKSSLGPVGLDKMLVD---DVGDVIVTNDGATILKQLEVEHPAGKV 78
Query: 291 LVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIA-SDAAKQALA 467
LV+++++QDEEVGDGTTSV + +L++QK+HP TII G+R+A +A K
Sbjct: 79 LVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISE 138
Query: 468 EASFDHQKNLNEASLRVDLENIARTTLSSKIL 563
SF +++ R + N A+T++SSKI+
Sbjct: 139 NISF-----TSDSIGRQSVVNAAKTSMSSKII 165
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 124 bits (299), Expect = 5e-29
Identities = 68/152 (44%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Frame = +3
Query: 111 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKI 290
R + A+AI ++VKS+LGP G+DK+LV + G V VTNDGATILK + V++PA K+
Sbjct: 22 RSQNVTAAVAIANIVKSSLGPVGLDKMLVD---DVGDVIVTNDGATILKQLEVEHPAGKV 78
Query: 291 LVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIA-SDAAKQALA 467
LV+++++QDEEVGDGTTSV + +L++QK+HP TII G+R+A +A K
Sbjct: 79 LVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISE 138
Query: 468 EASFDHQKNLNEASLRVDLENIARTTLSSKIL 563
SF +++ R + N A+T++SSKI+
Sbjct: 139 NISF-----TSDSIGRQSVVNAAKTSMSSKII 165
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 106 bits (254), Expect = 1e-23
Identities = 61/152 (40%), Positives = 94/152 (61%)
Frame = +3
Query: 111 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKI 290
R S+ + A A+ D V+++LGP+GMDK++ S +G V +TNDGATIL + V +P AK+
Sbjct: 33 RNSNIVAAKAVADAVRTSLGPRGMDKMIQS---GNGDVTITNDGATILNQMSVIHPTAKM 89
Query: 291 LVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAE 470
LV++SK QD E GDGTT+V V L+ + +HP TI ++ A+ A++ L E
Sbjct: 90 LVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDE 149
Query: 471 ASFDHQKNLNEASLRVDLENIARTTLSSKILS 566
S +L+ +L L +A T+L+SK++S
Sbjct: 150 MS--SPVDLSNDAL---LNKMATTSLNSKVVS 176
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 106 bits (254), Expect = 1e-23
Identities = 61/152 (40%), Positives = 94/152 (61%)
Frame = +3
Query: 111 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKI 290
R S+ + A A+ D V+++LGP+GMDK++ S +G V +TNDGATIL + V +P AK+
Sbjct: 33 RNSNIVAAKAVADAVRTSLGPRGMDKMIQS---GNGDVTITNDGATILNQMSVIHPTAKM 89
Query: 291 LVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAE 470
LV++SK QD E GDGTT+V V L+ + +HP TI ++ A+ A++ L E
Sbjct: 90 LVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDE 149
Query: 471 ASFDHQKNLNEASLRVDLENIARTTLSSKILS 566
S +L+ +L L +A T+L+SK++S
Sbjct: 150 MS--SPVDLSNDAL---LNKMATTSLNSKVVS 176
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 101 bits (243), Expect = 3e-22
Identities = 63/172 (36%), Positives = 91/172 (52%)
Frame = +3
Query: 60 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTND 239
PI +LK+ +S+ + D +++TLGP+G+DK++V + G ++ND
Sbjct: 5 PIILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVD---SKGATTISND 61
Query: 240 GATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTI 419
GATILK + + PAA +VD+++ QD EVGDGTTSV V IE +HPQ +
Sbjct: 62 GATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLL 121
Query: 420 IAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSIAR 575
I R A ++ L + K E LR L A TTLSSK++S R
Sbjct: 122 I---RAIGKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQER 170
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 101 bits (243), Expect = 3e-22
Identities = 63/172 (36%), Positives = 91/172 (52%)
Frame = +3
Query: 60 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTND 239
PI +LK+ +S+ + D +++TLGP+G+DK++V + G ++ND
Sbjct: 5 PIILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVD---SKGATTISND 61
Query: 240 GATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTI 419
GATILK + + PAA +VD+++ QD EVGDGTTSV V IE +HPQ +
Sbjct: 62 GATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLL 121
Query: 420 IAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSIAR 575
I R A ++ L + K E LR L A TTLSSK++S R
Sbjct: 122 I---RAIGKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQER 170
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 96.7 bits (230), Expect = 1e-20
Identities = 57/150 (38%), Positives = 89/150 (59%)
Frame = +3
Query: 117 SSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILV 296
S + A A+ + ++++LGP+G+DK+LVS G V +TNDGATI++ + V + AK++V
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVS---PDGDVTITNDGATIMEKMDVQHHVAKLMV 93
Query: 297 DMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEAS 476
++SK QD E+GDGTT V V KLI++ +HP I G+ + A K+AL +
Sbjct: 94 ELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDL---ACKKAL--ET 148
Query: 477 FDHQKNLNEASLRVDLENIARTTLSSKILS 566
D + R L A+T+L SKI++
Sbjct: 149 LDSISDKFPVENRERLVETAQTSLGSKIVN 178
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 96.7 bits (230), Expect = 1e-20
Identities = 57/150 (38%), Positives = 89/150 (59%)
Frame = +3
Query: 117 SSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILV 296
S + A A+ + ++++LGP+G+DK+LVS G V +TNDGATI++ + V + AK++V
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVS---PDGDVTITNDGATIMEKMDVQHHVAKLMV 93
Query: 297 DMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEAS 476
++SK QD E+GDGTT V V KLI++ +HP I G+ + A K+AL +
Sbjct: 94 ELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDL---ACKKAL--ET 148
Query: 477 FDHQKNLNEASLRVDLENIARTTLSSKILS 566
D + R L A+T+L SKI++
Sbjct: 149 LDSISDKFPVENRERLVETAQTSLGSKIVN 178
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 96.7 bits (230), Expect = 1e-20
Identities = 57/150 (38%), Positives = 89/150 (59%)
Frame = +3
Query: 117 SSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILV 296
S + A A+ + ++++LGP+G+DK+LVS G V +TNDGATI++ + V + AK++V
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVS---PDGDVTITNDGATIMEKMDVQHHVAKLMV 93
Query: 297 DMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEAS 476
++SK QD E+GDGTT V V KLI++ +HP I G+ + A K+AL +
Sbjct: 94 ELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDL---ACKKAL--ET 148
Query: 477 FDHQKNLNEASLRVDLENIARTTLSSKILS 566
D + R L A+T+L SKI++
Sbjct: 149 LDSISDKFPVENRERLVETAQTSLGSKIVN 178
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 85.4 bits (202), Expect = 3e-17
Identities = 50/169 (29%), Positives = 89/169 (52%)
Frame = +3
Query: 60 PIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTND 239
PI +L ++ + I D+++++LGP+ M K+L+ G + +TND
Sbjct: 8 PIIVLSQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMD---PMGGIVMTND 64
Query: 240 GATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTI 419
G IL+ I V +PAAK ++++++ QDEE GDGTTSV + +EQK HP I
Sbjct: 65 GNAILREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLI 124
Query: 420 IAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILS 566
I +R A + Q +E F ++ + + ++ + ++ L +K++S
Sbjct: 125 IKAYRQALEDMIQ-WSENKFSKTVDITDDA---EIAKVVKSCLGTKMIS 169
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 73.7 bits (173), Expect = 8e-14
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Frame = +3
Query: 129 GAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSK 308
GA + D+++S LGPKG K+LVS +G +++T DG +L + + +P A ++ S
Sbjct: 26 GARGLQDVMRSNLGPKGTLKMLVS---GAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 309 VQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQ 488
QD+ GDGTTS + L+ + LHP+ + G+ A+ + L +
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELL-------E 135
Query: 489 KNLNEASLRVD-LENIARTTLSSKI 560
K EA + D L + RT L +K+
Sbjct: 136 KFKKEAPVERDLLVEVCRTALRTKL 160
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 73.7 bits (173), Expect = 8e-14
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Frame = +3
Query: 129 GAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSK 308
GA + D+++S LGPKG K+LVS +G +++T DG +L + + +P A ++ S
Sbjct: 26 GARGLQDVMRSNLGPKGTLKMLVS---GAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 309 VQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQ 488
QD+ GDGTTS + L+ + LHP+ + G+ A+ + L +
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELL-------E 135
Query: 489 KNLNEASLRVD-LENIARTTLSSKI 560
K EA + D L + RT L +K+
Sbjct: 136 KFKKEAPVERDLLVEVCRTALRTKL 160
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 70.9 bits (166), Expect = 6e-13
Identities = 33/104 (31%), Positives = 64/104 (61%)
Frame = +3
Query: 153 VKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKVQDEEVGD 332
++S GP GM+K++++ + ++ VTND ATILK + + +PAA+I++ +++Q++++GD
Sbjct: 42 IRSAYGPNGMNKMVIN---HIEKLFVTNDAATILKELEIQHPAARIIIMATEMQEKQIGD 98
Query: 333 GTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQAL 464
T +V + LI + PQ + AG+ A++ A + L
Sbjct: 99 NTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEIL 142
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Frame = +3
Query: 111 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGV----DNP 278
R + +G + D V T+GPKG + I+ ++ G ++T DG T+ KSI + N
Sbjct: 28 RQAMLVGVNLLADAVSVTMGPKGRNVIIE---QSWGSPKITKDGVTVAKSIDLKDKYQNL 84
Query: 279 AAKILVDMSKVQDEEVGDGTTSVTV 353
AK++ D++ +EE GDGTT TV
Sbjct: 85 GAKLIQDVANKANEEAGDGTTCATV 109
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Frame = +3
Query: 111 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGV----DNP 278
R + +G + D V T+GPKG + I+ ++ G ++T DG T+ KSI + N
Sbjct: 28 RQAMLVGVNLLADAVSVTMGPKGRNVIIE---QSWGSPKITKDGVTVAKSIDLKDKYQNL 84
Query: 279 AAKILVDMSKVQDEEVGDGTTSVTV 353
AK++ D++ +EE GDGTT TV
Sbjct: 85 GAKLIQDVANKANEEAGDGTTCATV 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,387,690
Number of Sequences: 27780
Number of extensions: 204300
Number of successful extensions: 434
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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