Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1075
         (725 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    26   1.4  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.2  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    24   5.5  
AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    23   7.3  

>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 111 STDLANFDLELFVEVQRWFKR 173
           S D+  +DL  +  VQRWF +
Sbjct: 163 SLDMMKYDLTAYPNVQRWFAK 183


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 376 LVSYNMATHNTGFYRNVFNVL 438
           LVSY    H+  F R+ FN+L
Sbjct: 908 LVSYGFLFHDGAFCRSAFNLL 928


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 435 VIEGLTCIFSV*VTYFLKIFNINCILGLRVIFFWQQLWYE 554
           ++E    +  V   +FL +F I+CI G   I F     Y+
Sbjct: 450 IVEDWKFVSMVLDRFFLWVFTISCIFGTFGIIFQSPSLYD 489


>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 120 LANFDLELFVEVQRWFKR 173
           L NFD  ++  V RW+++
Sbjct: 175 LLNFDFSVYPNVHRWYEQ 192


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,432
Number of Sequences: 2352
Number of extensions: 13581
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)