Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1074
         (706 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    26   0.30 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         25   0.92 
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    25   0.92 
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    25   0.92 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.7  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   3.7  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.5  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   8.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.6  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   8.6  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 589 FLFHCFVLIYCLLILTRWICFCIK 518
           +LFH ++   CL+++  W+ F IK
Sbjct: 247 YLFHTYIPT-CLIVIMSWVSFWIK 269


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +1

Query: 325 DGIQVVLFTGSGNQLISRKLLLYFSLV 405
           +G+Q +L T S  +++S+  +L+F LV
Sbjct: 296 EGVQNILDTQSSAKVVSKSGVLFFGLV 322


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +1

Query: 325 DGIQVVLFTGSGNQLISRKLLLYFSLV 405
           +G+Q +L T S  +++S+  +L+F LV
Sbjct: 296 EGVQNILDTQSSAKVVSKSGVLFFGLV 322


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +1

Query: 325 DGIQVVLFTGSGNQLISRKLLLYFSLV 405
           +G+Q +L T S  +++S+  +L+F LV
Sbjct: 296 EGVQNILDTQSSAKVVSKSGVLFFGLV 322


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 679 DLISYRYTFSWFVNEYLYNITE 614
           D++  R+T  W   ++L+N+T+
Sbjct: 218 DILHLRHTKIWLRPDWLFNLTK 239


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 325 DGIQVVLFTGSGNQLISRKLLLYFSLV 405
           +GIQ +  T S  +++S+  +L+F LV
Sbjct: 297 EGIQDIFNTQSSAKVMSKNGVLFFGLV 323


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 270 YHIIVLGLDEIPFP 229
           Y+II+ G+D I FP
Sbjct: 574 YNIILKGIDAIEFP 587


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 311 VLLWMTEFKLYYLRVPVTN*YQESFFY 391
           ++    EF+LY + + +   Y ESF Y
Sbjct: 113 IIACQMEFQLYPMDIQICPIYIESFSY 139


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 465 KEKNRYILVRQKQIHAIDFMQKQIHLVNM 551
           +E  RY+  R +  H ++  Q+ + L+N+
Sbjct: 7   QEFRRYLRNRNQLQHVLEETQQALELINL 35


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 529 NKSTLSI*VDNKLKQNNETKTVCVLNS 609
           NK   ++  D K K   E+KTV +LN+
Sbjct: 183 NKIAETLDEDTKNKLIEESKTVFILNN 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,287
Number of Sequences: 438
Number of extensions: 4293
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)