Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1071
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       27   0.61 
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     23   7.5  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   7.5  

>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -2

Query: 599 YHFSIITKSCCSNETFKTLS*QRNRYYSLQM*KAFRARKSSNENEAPLPLLV-RTIQK 429
           Y+    T   C+N +F  L   R + YS ++   +     ++ + + LPLL+ RT+ K
Sbjct: 92  YNIECCTGDYCNNGSFPELPPMRGKTYSKKLSFEYLQHSVTSGSGSGLPLLIQRTLAK 149


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +1

Query: 514 NE*YLFRC*DNV-LKVSLEQHDLVIIEK 594
           N+  L  C D++ +K+SLE HD   IE+
Sbjct: 342 NKIALLSCADSLKMKISLESHDWEAIEQ 369


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -3

Query: 505 EKLFELEKALMKTKLRCHC*CERYKRTHESLIGCKYLDFYL 383
           EKL   E   +   LR  C CE+ K+  E    C +   Y+
Sbjct: 448 EKLISNEAVELDIDLRTSCNCEKNKKPMELSELCNFNGDYV 488


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,318
Number of Sequences: 2352
Number of extensions: 11940
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)