Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1069
         (512 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahym...    36   0.72 
UniRef50_Q5ADW4 Cluster: Likely initiator-specific tRNA phosphor...    34   2.2  
UniRef50_Q6LFB1 Cluster: Putative uncharacterized protein; n=1; ...    33   3.8  
UniRef50_A0DZ74 Cluster: Chromosome undetermined scaffold_7, who...    33   5.0  
UniRef50_Q9AZY0 Cluster: Orf49; n=2; root|Rep: Orf49 - Lactococc...    32   6.7  
UniRef50_Q22YW2 Cluster: Putative uncharacterized protein; n=1; ...    32   6.7  
UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein PF07_0...    32   8.8  
UniRef50_A0BK93 Cluster: Chromosome undetermined scaffold_111, w...    32   8.8  

>UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahymena
           thermophila SB210|Rep: KOW motif family protein -
           Tetrahymena thermophila SB210
          Length = 778

 Score = 35.5 bits (78), Expect = 0.72
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSIN 404
           + C+ +H Y  +++ +N KFR  YT+ +IN
Sbjct: 625 YQCQVIHVYKSLVFLFNPKFRDTYTVENIN 654


>UniRef50_Q5ADW4 Cluster: Likely initiator-specific tRNA
           phosphoribosyl transferase; n=1; Candida albicans|Rep:
           Likely initiator-specific tRNA phosphoribosyl
           transferase - Candida albicans (Yeast)
          Length = 437

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 372 FRQDYTINSINKDKQYLIYSQFDNKRQEQKF 464
           F ++YTI  I KD+Q L YS   NK+   KF
Sbjct: 325 FHEEYTITDIPKDRQILQYSISSNKKGSNKF 355


>UniRef50_Q6LFB1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1806

 Score = 33.1 bits (72), Expect = 3.8
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +3

Query: 321 CKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQFDNKRQEQKFDNK 473
           CK    YD  +Y+YN K ++ Y    +NK   +LIY Q+++ +      NK
Sbjct: 223 CKNNIEYDNNIYYYNKKIQKFY--GYVNKQNDHLIYKQWNSYKNISTDQNK 271


>UniRef50_A0DZ74 Cluster: Chromosome undetermined scaffold_7, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_7,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 853

 Score = 32.7 bits (71), Expect = 5.0
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = +3

Query: 342 DWILYFYNHKFRQDYTINSINKDKQYLIYS 431
           +++ YF+N++F Q  T  ++N + QY+IYS
Sbjct: 310 NFLTYFHNNQFIQGITEQNLNSNLQYIIYS 339


>UniRef50_Q9AZY0 Cluster: Orf49; n=2; root|Rep: Orf49 - Lactococcus
           phage bIL285
          Length = 105

 Score = 32.3 bits (70), Expect = 6.7
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 345 WILYFYNHK--FRQDYTINSINKDKQYLIYSQFDNKRQEQKFD 467
           +ILY+ + +  F+ D  I + NKD    +YS   N+R+EQK +
Sbjct: 32  YILYYVDEEIGFKADNQIYAKNKDITIELYSNLKNEREEQKLE 74


>UniRef50_Q22YW2 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1440

 Score = 32.3 bits (70), Expect = 6.7
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 345  WILYFYNHKFRQDYTINSINKDKQYLIYSQFDNKRQEQKFDNK*YACVCA 494
            W+ + Y +   Q Y    IN   QYL Y ++ N+R+EQ   N  Y+ V +
Sbjct: 932  WLFFGYYYMVVQLYNDCKINH--QYLNYGKYLNEREEQTISNSTYSIVAS 979


>UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein
           PF07_0118; n=3; Plasmodium|Rep: Putative uncharacterized
           protein PF07_0118 - Plasmodium falciparum (isolate 3D7)
          Length = 5561

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 318 NCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQFDNKRQEQ 458
           N +FV  Y  I  FY++ F     I + +KD QY  YS ++N  + Q
Sbjct: 401 NIQFVLPYKPIRMFYSNNFLFFVNIINKSKDLQYFTYSIYNNNHKNQ 447


>UniRef50_A0BK93 Cluster: Chromosome undetermined scaffold_111,
           whole genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_111,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 288

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +3

Query: 324 KFVHYYD--WILYFYNHKFRQDYTINSINKDKQYLI-YSQFDNKRQEQ 458
           +F H  D  W+ Y+Y  K  Q  TI  I KD  YL  Y +F   R  +
Sbjct: 176 QFQHLIDEKWVTYYYFFKPLQFATIEEITKDYHYLFTYEKFSGVRDNR 223


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,796,453
Number of Sequences: 1657284
Number of extensions: 8041963
Number of successful extensions: 17602
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17592
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)