Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1069
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   4.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   6.4  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 62  CYLLDCILPSRWL*MKKKKK 3
           C  L  + P +WL  KKK++
Sbjct: 315 CRTLGSLPPFKWLFKKKKRR 334


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 7/27 (25%), Positives = 18/27 (66%)
 Frame = -2

Query: 214 IPPIQCRVDHVFFITVDLLLRMHVTDA 134
           IP  +C++  V  +T+ ++L +H++ +
Sbjct: 2   IPRPRCKLRTVLIVTLLVVLLVHISSS 28


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 147 CIRRSRSTVMKNT*STRH 200
           C+R   S V+KN    RH
Sbjct: 259 CVRSEASKVVKNAQKLRH 276


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,341
Number of Sequences: 336
Number of extensions: 2365
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)