Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1069
(512 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44831| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_23676| Best HMM Match : DUF904 (HMM E-Value=0.44) 31 0.56
SB_27139| Best HMM Match : Capsid_Iridovir (HMM E-Value=1.5) 30 0.97
SB_26846| Best HMM Match : Pox_A32 (HMM E-Value=0.0014) 30 0.97
SB_20289| Best HMM Match : DUF1604 (HMM E-Value=3.7) 30 0.97
SB_47194| Best HMM Match : CBM_19 (HMM E-Value=2) 30 1.3
SB_45296| Best HMM Match : DUF1604 (HMM E-Value=4.4) 30 1.3
SB_44692| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9) 30 1.3
SB_34742| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9) 30 1.3
SB_31679| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_20340| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9) 30 1.3
SB_11449| Best HMM Match : RtcR (HMM E-Value=1.9) 30 1.3
SB_56701| Best HMM Match : E-MAP-115 (HMM E-Value=0.63) 30 1.3
SB_45674| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9) 30 1.3
SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023) 30 1.3
SB_47444| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9) 29 1.7
SB_42470| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_42219| Best HMM Match : DUF1604 (HMM E-Value=4.8) 29 1.7
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 1.7
SB_26107| Best HMM Match : Strep_SA_rep (HMM E-Value=5.8) 29 1.7
SB_8185| Best HMM Match : Rho_N (HMM E-Value=0.0007) 29 1.7
SB_57227| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_52833| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_52317| Best HMM Match : E-MAP-115 (HMM E-Value=1.4) 28 5.2
>SB_44831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ 434
W K Y DW+ YN+K R D N D+ + +YSQ
Sbjct: 96 WQKKRQEYQDWLAEQYNNKVRADE--NDKETDEAFRLYSQ 133
>SB_23676| Best HMM Match : DUF904 (HMM E-Value=0.44)
Length = 591
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ 434
W K Y DW+ YN+K R D N D+ + +YSQ
Sbjct: 50 WQKKRQEYQDWLAEQYNNKVRADE--NDKETDEAFRLYSQ 87
>SB_27139| Best HMM Match : Capsid_Iridovir (HMM E-Value=1.5)
Length = 715
Score = 30.3 bits (65), Expect = 0.97
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ 434
W K +Y DW+ YN+K R D N D+ + +Y+Q
Sbjct: 660 WQKKRQNYQDWLAEQYNNKVRADE--NDKETDQAFKLYAQ 697
>SB_26846| Best HMM Match : Pox_A32 (HMM E-Value=0.0014)
Length = 509
Score = 30.3 bits (65), Expect = 0.97
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 427 WQKKRQEYQDWLEEEYNNKLRADQ--NDKETDQAFKLYAQTHPDFDLKEPE 475
>SB_20289| Best HMM Match : DUF1604 (HMM E-Value=3.7)
Length = 296
Score = 30.3 bits (65), Expect = 0.97
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 50 WQKKRQEYQDWLEEEYNNKLRADQ--NDEETDQAFKLYAQTHPDFDLKEPE 98
>SB_47194| Best HMM Match : CBM_19 (HMM E-Value=2)
Length = 190
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 108 WQKKRQEYQDWLGEEYNNKLRADQ--NDKETDQAFKLYAQTHPDFDLKEPE 156
>SB_45296| Best HMM Match : DUF1604 (HMM E-Value=4.4)
Length = 296
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 50 WQKKRQEYQDWLGEEYNNKLRADQ--NDKETDQAFKLYAQTHPDFDLKEPE 98
>SB_44692| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9)
Length = 129
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 50 WQKKRQEYQDWLGEEYNNKLRADQ--NDKETDEAFKLYAQTHPDFDLKEPE 98
>SB_34742| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9)
Length = 306
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 75 WQKKRQEYQDWLGEEYNNKLRADQ--NDKETDQAFKLYAQTHPDFDLKEPE 123
>SB_31679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 4 WQKKRQEYQDWLGEEYNNKLRADQ--NDKETDQAFKLYAQTHPDFDLKEPE 52
>SB_20340| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9)
Length = 154
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 75 WQKKRQEYQDWLGEEYNNKLRADQ--NDEETDQAFKLYAQTHPDFDLKEPE 123
>SB_11449| Best HMM Match : RtcR (HMM E-Value=1.9)
Length = 335
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 4 WQKKRQEYQDWLGEEYNNKLRADQ--NDKETDQAFKLYAQTHPDFDLKEPE 52
>SB_56701| Best HMM Match : E-MAP-115 (HMM E-Value=0.63)
Length = 936
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 559 WQKKRQEYQDWLEEEYNNKLRADE--NDKETDQAFKLYAQTHPDFDLKEPE 607
>SB_45674| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9)
Length = 154
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 75 WQKKRQEYQDWLGEEYNNKLRADQ--NDKETDQAFKLYAQTHPDFDLKEPE 123
>SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023)
Length = 1901
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 1577 WQKKRQEYQDWLGEEYNNKLRADQ--NDKETDQAFKLYAQTHPDFDLKEPE 1625
>SB_47444| Best HMM Match : Strep_SA_rep (HMM E-Value=5.9)
Length = 129
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N+ D+ + +Y+Q FD K E
Sbjct: 50 WQKKRQEYQDWLEEEYNNKVRADG--NNKETDEAFKLYAQTHPDFDLKEPE 98
>SB_42470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN K R D N D+ + +Y+Q FD K E
Sbjct: 50 WQKKRQEYQDWLTEQYNDKVRADE--NDKETDEAFKLYAQTHPDFDLKEPE 98
>SB_42219| Best HMM Match : DUF1604 (HMM E-Value=4.8)
Length = 356
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 75 WQKKRQEYQDWLGEEYNNKLRADE--NDKETDQAFKLYAQTHPDFDLKEPE 123
>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 2629
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN K R D N D+ + +Y+Q FD K E
Sbjct: 2482 WQKKRQEYQDWLTEQYNDKVRADE--NDKETDEAFKLYAQTHPDFDLKEPE 2530
>SB_26107| Best HMM Match : Strep_SA_rep (HMM E-Value=5.8)
Length = 171
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N D+ + +Y+Q FD K E
Sbjct: 92 WQKKRQEYQDWLEEEYNNKVRADE--NDKETDEAFKLYAQTHPDFDLKEPE 140
>SB_8185| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 1133
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN K R D N D+ + +Y+Q FD K E
Sbjct: 1064 WQKKRQEYQDWLAEQYNDKVRADE--NDEETDQAFKLYAQTHPNFDLKEPE 1112
>SB_57227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 712
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ 434
W K Y DW+ YN K R D N D+ +YSQ
Sbjct: 56 WQKKRQEYQDWLAEEYNKKARADE--NDKETDEALRLYSQ 93
>SB_52833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 187 HVFFITVDLLLRMHVTDACSYSN 119
H FF V LLR H T++ S+SN
Sbjct: 58 HSFFTLVPFLLRPHGTESVSFSN 80
>SB_52317| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)
Length = 681
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ----FDNKRQE 455
W K Y DW+ YN+K R D N ++ + +Y+Q FD K E
Sbjct: 108 WQKKRQEYQDWLGEEYNNKLRADQ--NDKETNQAFKLYAQTHPDFDLKEPE 156
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,425,778
Number of Sequences: 59808
Number of extensions: 271954
Number of successful extensions: 566
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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