Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1069
         (512 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81050-4|CAB02854.1|  329|Caenorhabditis elegans Hypothetical pr...    28   3.4  
U61949-2|AAB03152.1|  884|Caenorhabditis elegans Puromycin-sensi...    28   4.5  
U61949-1|AAY44009.1|  948|Caenorhabditis elegans Puromycin-sensi...    28   4.5  
Z93379-7|CAD54132.1|  188|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z81579-6|CAB04652.3|  347|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U56961-3|AAK39294.1|  634|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U40952-12|AAA81745.1|  297|Caenorhabditis elegans Hypothetical p...    27   7.9  
U40410-4|AAA81393.1|  259|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z81050-4|CAB02854.1|  329|Caenorhabditis elegans Hypothetical
           protein C50B6.5 protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 228 IMAIEFPLSNVALITYFSSRSTYF 157
           +  + FP+  VA+I  F ++STYF
Sbjct: 18  LFIVSFPIYTVAIIALFRTKSTYF 41


>U61949-2|AAB03152.1|  884|Caenorhabditis elegans
           Puromycin-sensitive aminopeptidaseprotein 1, isoform a
           protein.
          Length = 884

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 223 HDNDITRFT*LFQDII*TRGPAVVEIRLQLIGIVSLYTIMIGF 351
           H   I +FT +F D +    P   +IRL   G+V+ Y    GF
Sbjct: 680 HQPTIDKFTQMFNDFLEKGTPIHPDIRLATFGVVARYGGKEGF 722


>U61949-1|AAY44009.1|  948|Caenorhabditis elegans
           Puromycin-sensitive aminopeptidaseprotein 1, isoform b
           protein.
          Length = 948

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 223 HDNDITRFT*LFQDII*TRGPAVVEIRLQLIGIVSLYTIMIGF 351
           H   I +FT +F D +    P   +IRL   G+V+ Y    GF
Sbjct: 744 HQPTIDKFTQMFNDFLEKGTPIHPDIRLATFGVVARYGGKEGF 786


>Z93379-7|CAD54132.1|  188|Caenorhabditis elegans Hypothetical
           protein F21H7.12 protein.
          Length = 188

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -3

Query: 288 CGTSSLYDILKQLRKTCNIIIMAIEFPLSNVALITY-FSSRSTYFFGCM 145
           CGT   YD L      C+II+    F  S V  I Y FS   + +  C+
Sbjct: 122 CGTLESYDRLIHSDYQCSIIVPISVFVFSIVTCIVYLFSIVGSIYIWCV 170


>Z81579-6|CAB04652.3|  347|Caenorhabditis elegans Hypothetical
           protein R13H4.7 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 240 CNIIIMAIEFPLSNVALITYFSSRST 163
           CN+I+M + FPL  +AL   F  +++
Sbjct: 175 CNVILMVVPFPLYVLALAVLFQRQTS 200


>U56961-3|AAK39294.1|  634|Caenorhabditis elegans Hypothetical
           protein T19D7.4 protein.
          Length = 634

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 333 HYYDWILYFYNHKFRQDYTINSINKDKQ 416
           H +D ILYFYN K  +D T   + K  Q
Sbjct: 492 HIWDVILYFYNLKTGRDTTDAPVRKLSQ 519


>U40952-12|AAA81745.1|  297|Caenorhabditis elegans Hypothetical
           protein C03B1.1 protein.
          Length = 297

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +3

Query: 315 WNCKFVHYYDWILYFYNHKFRQDYTINSINKDKQYLIYSQ-FDN 443
           W C+ +    W   FY+H++ +         + QY ++ Q FDN
Sbjct: 161 WTCEKIEI--WYRDFYSHRYLEQVDGKEKYDEDQYTVFDQLFDN 202


>U40410-4|AAA81393.1|  259|Caenorhabditis elegans Hypothetical
           protein C54G7.1 protein.
          Length = 259

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 13/48 (27%), Positives = 28/48 (58%)
 Frame = -3

Query: 357 SIKSNHNSVQTYNSN*L*SNFDYCGTSSLYDILKQLRKTCNIIIMAIE 214
           S++S   SV  Y+   +  N+D+CG+S+   ++K   +T + I+  ++
Sbjct: 157 SLESLCKSVYEYDKCFVNENYDFCGSSAARFLVKLNHQTSHTILELLD 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,893,831
Number of Sequences: 27780
Number of extensions: 209159
Number of successful extensions: 441
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)