Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1065
(735 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 36 0.008
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 32 0.098
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.13
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.30
SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyce... 29 0.52
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 29 0.91
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.91
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.6
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 28 1.6
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 28 1.6
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.1
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 2.1
SPCC645.03c |isa1||iron-sulfur protein Isa1|Schizosaccharomyces ... 27 2.1
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 27 3.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.7
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 26 4.8
SPAC9E9.02 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 6.4
SPAC1783.04c |hst4||Sir2 family histone deacetylase Hst4|Schizos... 26 6.4
SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces pom... 26 6.4
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 35.5 bits (78), Expect = 0.008
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +2
Query: 20 TPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNS 199
TPV P S TS+PP S T ++S ++ + S+SI T S T +
Sbjct: 353 TPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCT--TSTSIPPTGNSTTPVT 410
Query: 200 PVVP---LPLPKTKTNESTS 250
P VP P T TN +TS
Sbjct: 411 PTVPPTSSSTPLTTTNCTTS 430
Score = 31.9 bits (69), Expect = 0.098
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = +2
Query: 20 TPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNS 199
TPV P S TS+PP S T ++S + + S+SI T S T +
Sbjct: 299 TPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCT--TSTSIPPTGNSTTPVT 356
Query: 200 PVVPLPLPKTKTNEST 247
P VP P + ++ ST
Sbjct: 357 PTVP---PTSTSSTST 369
Score = 28.3 bits (60), Expect = 1.2
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +2
Query: 5 SSPP--KTPVLSRE--VPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKK 172
SS P TPV + S+L TS+P + T+ TS V S V +S
Sbjct: 518 SSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPV----TSSNY 573
Query: 173 TVESKTSNSPVVPLPLPKTKTNESTSAL 256
T+ S T PV P+ T STS L
Sbjct: 574 TISSST---PVTSTPVTTTNCTTSTSVL 598
Score = 26.6 bits (56), Expect = 3.7
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +2
Query: 56 LQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVVPLPLPKTKT 235
L T SP +++TS + + +P + E +SS T + T+ S PLP T
Sbjct: 64 LSTGSP-----VEITSTSCTTDTSASTPIITESTSS---TSSASTTGSSSSPLPSTSTSC 115
Query: 236 NESTS 250
STS
Sbjct: 116 TTSTS 120
Score = 26.6 bits (56), Expect = 3.7
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +2
Query: 20 TPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNS 199
TPV S + + TS+ S +TS + S +V S+ + + + +S++
Sbjct: 461 TPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSST 520
Query: 200 PVVPLPLPKTKTNESTSAL 256
PV P+ T STS L
Sbjct: 521 PVTSTPVTTTNCTTSTSVL 539
Score = 26.2 bits (55), Expect = 4.8
Identities = 21/81 (25%), Positives = 32/81 (39%)
Frame = +2
Query: 5 SSPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVES 184
SS TP+ P S TS P I TS +++ P P ++ +
Sbjct: 240 SSSLSTPITPTVPPTSTSSTSIP-----IPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPT 294
Query: 185 KTSNSPVVPLPLPKTKTNEST 247
S +PV P P + ++ ST
Sbjct: 295 GNSTTPVTPTVPPTSTSSTST 315
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 31.9 bits (69), Expect = 0.098
Identities = 22/76 (28%), Positives = 29/76 (38%)
Frame = +2
Query: 17 KTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSN 196
KTPV S + P + SPP A S KPSPAV S T ++
Sbjct: 446 KTPVFSFKAPSATTDKPSPPVSSIFSFN--APSAASTKPSPAVSSTFSFNAPTTTPSATS 503
Query: 197 SPVVPLPLPKTKTNES 244
++ P NE+
Sbjct: 504 FSIINKEKPARSPNET 519
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.13
Identities = 44/163 (26%), Positives = 65/163 (39%), Gaps = 9/163 (5%)
Frame = +2
Query: 17 KTPVLSREVPRSILQTSSPPKKGSIKLTS-LATSQIVKKPSPAVFER--SSSIKKTVESK 187
+TP S E +S SSPPK S T S + PSP ER S + ++
Sbjct: 461 RTPAKSSEEAKSTTNDSSPPKDSSSTSTQPTEQSNAQQAPSPKEEERPLPSEPSQNQPAE 520
Query: 188 TSNSPVVP---LPLPKTKTNESTSALKXXXXXXXXXXXXXIELVNLETVTSPPLQLKSNE 358
++P P +PLP + + +K E N E T P+ E
Sbjct: 521 YRDTPDTPRNIMPLPGLMS--ADQPIKVTEPSNDADKAIVAEGPNNEEETKGPV---IPE 575
Query: 359 SQSKSDRNMHAKTLKRDDSIVREIPPKI---EKLTLVAPEIEQ 478
+Q S++ +H KT + V PP I +K TL + E +
Sbjct: 576 TQETSEQQVH-KTPSPEKQKVLSPPPIITNFDKETLASNEAHE 617
Score = 25.4 bits (53), Expect = 8.5
Identities = 17/71 (23%), Positives = 26/71 (36%)
Frame = +2
Query: 5 SSPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVES 184
S+PP P S E+P + +PP + + + P P S+
Sbjct: 1061 SAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP-----KPSVAVPPVP 1115
Query: 185 KTSNSPVVPLP 217
S +P VP P
Sbjct: 1116 APSGAPPVPKP 1126
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 30.3 bits (65), Expect = 0.30
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +2
Query: 56 LQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVVPLPLPKTKT 235
+ TSS G+I TS+A S I + S + F SSS + S +S+S + +
Sbjct: 116 ISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSS 175
Query: 236 NESTSA 253
++S+S+
Sbjct: 176 SKSSSS 181
>SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 698
Score = 29.5 bits (63), Expect = 0.52
Identities = 14/62 (22%), Positives = 34/62 (54%)
Frame = +2
Query: 74 PKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVVPLPLPKTKTNESTSA 253
PK ++K + LA ++ ++ SPA+ + +KK +ES++ + + ++K + + A
Sbjct: 10 PKGLNVKRSKLADARFIEVESPALSNGAVDLKKFIESRSFEITALQDAMKRSKESSAQRA 69
Query: 254 LK 259
+
Sbjct: 70 FQ 71
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 28.7 bits (61), Expect = 0.91
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 2 ESSPPKTPVLSREVPR-SILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSI---- 166
E + P P S E P S+ SS TS ++ +P+P SSS
Sbjct: 212 EGAKPPFPRESTEKPLLSVSALSSSSHLQPTSATSSSSRLYPSRPAPTPPASSSSSPLLS 271
Query: 167 KKTVESKTSNSPVVPLPLPKTKTNES 244
+TV++ TSN+ P PL +K+ ++
Sbjct: 272 SQTVKTTTSNASRQPSPLVSSKSTDN 297
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 0.91
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 5 SSPPK--TPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTV 178
+SPP+ PV S + PP + +LA ++ + P P R + K +
Sbjct: 269 NSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANK-KRPPPPPPPSRRNRGKPPI 327
Query: 179 ESKTSNSPVVPLPLPKTKTNESTS 250
+ +SNS + P P P ++N + S
Sbjct: 328 GNGSSNSSLPP-PPPPPRSNAAGS 350
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.6
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +2
Query: 5 SSPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVES 184
SSP + S + S L TSS P S +S +TS + S + SSS ++ S
Sbjct: 220 SSPSSSS--SSTLTSSSLSTSSIPSTSS---SSSSTSSSLSSSSSSSTASSSSSSSSIIS 274
Query: 185 KTSNSPVVPLPLPKTKTNESTSA 253
+S+S P T ++ S+S+
Sbjct: 275 SSSSSSSSPTSTSSTISSSSSSS 297
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/83 (20%), Positives = 34/83 (40%)
Frame = +2
Query: 11 PPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKT 190
PP TP S L+ + P S++ T + + + ++ + K V SK
Sbjct: 42 PPSTPNGKEAASPSALKQNVRPSLNSVQQTPASIDAVASSSNVSLQSQQPLSKPVVSSKP 101
Query: 191 SNSPVVPLPLPKTKTNESTSALK 259
+ + +P P + S+++ K
Sbjct: 102 NQTTAMPPPSNNPSRHVSSTSNK 124
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +2
Query: 98 TSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVVPLPLPKTKTNESTSAL 256
++++++ + PS +FE ++K S +SP LP T+ + S++
Sbjct: 250 SNISSTNVATTPSNTIFEMDDTLKADSSSNEYHSPTNTLPSYHTEADLDNSSI 302
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 27.5 bits (58), Expect = 2.1
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +2
Query: 5 SSPPKTPVL-SREVPRSILQTSSPPK---KGSIKLTSLATSQIVKKPSPAVFERSSSIKK 172
S PPK P L SR P + S P + + + + + + P P + S S +
Sbjct: 106 SQPPKEPALPSRGTPSLPSRPGSRPSVLNQEQVPPPPVRPNVMSQMPPPPSYSSSGSYSQ 165
Query: 173 TVESKTSNSPVVPLP 217
T +S + + PLP
Sbjct: 166 TYQSNANYTASSPLP 180
Score = 26.2 bits (55), Expect = 4.8
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +2
Query: 44 PRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTS--NSPV-VPL 214
PR + Q SS T+ +T+ VKKP P + + S +S +SP VP
Sbjct: 193 PRRVSQNSSYASGSVPAATAASTASPVKKPPPPAPPKPRRLAARTSSNSSGVSSPTSVPP 252
Query: 215 PLPK-TKTN 238
P+ + T+ N
Sbjct: 253 PVQRNTRPN 261
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.5 bits (58), Expect = 2.1
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +2
Query: 5 SSPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVES 184
SSP + + P S +SS S +S ++S S + SSS + S
Sbjct: 142 SSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-SS 200
Query: 185 KTSNSPVVPLPLPKTKTNESTSA 253
+S+S VP+ + ++ S+S+
Sbjct: 201 SSSSSSSVPITSSTSSSHSSSSS 223
>SPCC645.03c |isa1||iron-sulfur protein Isa1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 190
Score = 27.5 bits (58), Expect = 2.1
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +2
Query: 5 SSPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPA 142
S+ PK PV RE I T P+K IKLT LA + K S A
Sbjct: 60 STAPK-PVTERE----IASTRFMPRKNVIKLTPLAVEHLKKMQSSA 100
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 59 QTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVES 184
+T PP + SI A I KP P FE S++ + S
Sbjct: 555 ETFIPPVQNSITSNKEAVKPIKNKPKPISFESLSAVGNLIIS 596
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 3.7
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +2
Query: 38 EVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVVPLP 217
E IL T S K S +S +SQ ++ S +SSI T S +++S + +
Sbjct: 316 EAIHKILDTKS---KHSSSKSSHDSSQGLESTSSIALNPTSSISSTSSSSSTSSAISTIS 372
Query: 218 LPKTKTNESTS 250
TKT S S
Sbjct: 373 QDHTKTVTSVS 383
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 26.2 bits (55), Expect = 4.8
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 56 LQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVVPLPLPKTKT 235
++ +P KK +K + S++V PS A ++KK+V +SPVVP P+ T
Sbjct: 505 VKAKAPTKKSKVKPSKQEESKVVV-PSNA-----KAVKKSV---VPSSPVVPS--PRKAT 553
Query: 236 NESTS 250
N+S S
Sbjct: 554 NKSLS 558
>SPAC9E9.02 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 98
Score = 25.8 bits (54), Expect = 6.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 100 CKFNRTFFWRRRSLKN 53
C F+++ FW R+ +KN
Sbjct: 52 CNFSKSLFWLRKKIKN 67
>SPAC1783.04c |hst4||Sir2 family histone deacetylase
Hst4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +2
Query: 41 VPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSN 196
+P+S ++ P G++++ S +KK +P +F+R + + + KT N
Sbjct: 171 LPQSAPWPTTIPLHGTLEVVSCTRCSFLKKFNPDIFDR-NGVTVCPDCKTEN 221
>SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 46 WNFSRKDRSFGWRGF 2
WNF+ D SFGW F
Sbjct: 318 WNFNLLDASFGWTVF 332
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,489,757
Number of Sequences: 5004
Number of extensions: 44893
Number of successful extensions: 208
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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