Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1065
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 32 0.37
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 0.85
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 31 1.1
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 31 1.1
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 1.1
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 1.1
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 1.1
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 1.1
AL021503-5|CAA16416.2| 325|Caenorhabditis elegans Hypothetical ... 30 1.5
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF039720-5|AAB96696.1| 408|Caenorhabditis elegans Hypothetical ... 29 2.6
Z99286-1|CAH60792.1| 311|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 29 4.5
U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to i... 29 4.5
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 4.5
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 29 4.5
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 29 4.5
AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical ... 29 4.5
Z81057-3|CAB02916.1| 168|Caenorhabditis elegans Hypothetical pr... 28 6.0
U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical p... 28 6.0
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 28 6.0
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 28 7.9
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 28 7.9
AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical ... 28 7.9
AF003139-10|AAB54160.3| 294|Caenorhabditis elegans Hypothetical... 28 7.9
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 32.3 bits (70), Expect = 0.37
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 20 TPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSI--KKTVESKTS 193
TP L+ VP S+++ ++ T T PS +VF SSS + E+ +S
Sbjct: 1554 TPSLASHVPTSVMEAV---RRNRAFYTPKTTGG---PPSSSVFGTSSSAGSSRGGENSSS 1607
Query: 194 NSPVVPLPLPKTKTNESTS 250
+SP LP+P ++++STS
Sbjct: 1608 SSPFPNLPVPPWRSSKSTS 1626
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.1 bits (67), Expect = 0.85
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Frame = +2
Query: 14 PKTPVLSREVPR-SILQTSSPPKKGSIKLTSLATSQIVKKPS-PAVFERSSSIKKTVESK 187
PKT V + VP+ +++ S P S L+ ++ +V+KP+ A +R ++K +V +
Sbjct: 762 PKTTVAT--VPKVTVVPVSRVPVAPSTPLSRRMSAPVVRKPTMTAEKKREITMKPSVSTS 819
Query: 188 -------TSNSPVVPLPLPKTKTNESTSALK 259
TS+ P+V PLPK E L+
Sbjct: 820 ARPSLINTSSHPMVRSPLPKMSVLEKPKPLR 850
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 59 QTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVVPLPLPKTKTN 238
++ P+K S K S+ VK+P P E +KK+ S VP P P++K
Sbjct: 686 ESEPEPEKNSNK----KNSKRVKEPEPEPEEEPEPVKKSKRSLKKVKVAVPDPAPESKDE 741
Query: 239 ESTSAL 256
E+ ++
Sbjct: 742 ENEESV 747
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 59 QTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVVPLPLPKTKTN 238
++ P+K S K S+ VK+P P E +KK+ S VP P P++K
Sbjct: 684 ESEPEPEKNSNK----KNSKRVKEPEPEPEEEPEPVKKSKRSLKKVKVAVPDPAPESKDE 739
Query: 239 ESTSAL 256
E+ ++
Sbjct: 740 ENEESV 745
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 59 QTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVVPLPLPKTKTN 238
++ P+K S K S+ VK+P P E +KK+ S VP P P++K
Sbjct: 686 ESEPEPEKNSNK----KNSKRVKEPEPEPEEEPEPVKKSKRSLKKVKVAVPDPAPESKDE 741
Query: 239 ESTSAL 256
E+ ++
Sbjct: 742 ENEESV 747
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 59 QTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVVPLPLPKTKTN 238
++ P+K S K S+ VK+P P E +KK+ S VP P P++K
Sbjct: 684 ESEPEPEKNSNK----KNSKRVKEPEPEPEEEPEPVKKSKRSLKKVKVAVPDPAPESKDE 739
Query: 239 ESTSAL 256
E+ ++
Sbjct: 740 ENEESV 745
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.7 bits (66), Expect = 1.1
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 4/158 (2%)
Frame = +2
Query: 8 SPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQI----VKKPSPAVFERSSSIKKT 175
S K V+S+ ++ ++ +P ++ S L I KK SP+ ++ S +KT
Sbjct: 1330 SVSKIEVVSKTDSQTDVREGTPKRRVSFAEEELPKEVIDSDRKKKKSPSPDKKEKSPEKT 1389
Query: 176 VESKTSNSPVVPLPLPKTKTNESTSALKXXXXXXXXXXXXXIELVNLETVTSPPLQLKSN 355
E S P KT E + K + E V SP + KS
Sbjct: 1390 EEKPAS---------PTKKTGEEVKSPKEKSPASPTKKE---KSPAAEEVKSPTKKEKSP 1437
Query: 356 ESQSKSDRNMHAKTLKRDDSIVREIPPKIEKLTLVAPE 469
S +K +++ + T K D + + PPK +PE
Sbjct: 1438 SSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +2
Query: 17 KTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSN 196
K+P + P + + + P K K + ++ +K P+ SS KKT +
Sbjct: 1789 KSPTKKEKSPEKVEEKPASPTKKE-KTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEK 1847
Query: 197 SPVVPLPLPKTKT 235
SP P PK+ T
Sbjct: 1848 SPEKPEEKPKSPT 1860
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.7 bits (66), Expect = 1.1
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 4/158 (2%)
Frame = +2
Query: 8 SPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQI----VKKPSPAVFERSSSIKKT 175
S K V+S+ ++ ++ +P ++ S L I KK SP+ ++ S +KT
Sbjct: 1330 SVSKIEVVSKTDSQTDVREGTPKRRVSFAEEELPKEVIDSDRKKKKSPSPDKKEKSPEKT 1389
Query: 176 VESKTSNSPVVPLPLPKTKTNESTSALKXXXXXXXXXXXXXIELVNLETVTSPPLQLKSN 355
E S P KT E + K + E V SP + KS
Sbjct: 1390 EEKPAS---------PTKKTGEEVKSPKEKSPASPTKKE---KSPAAEEVKSPTKKEKSP 1437
Query: 356 ESQSKSDRNMHAKTLKRDDSIVREIPPKIEKLTLVAPE 469
S +K +++ + T K D + + PPK +PE
Sbjct: 1438 SSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +2
Query: 17 KTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSN 196
K+P + P + + + P K K + ++ +K P+ SS KKT +
Sbjct: 1789 KSPTKKEKSPEKVEEKPASPTKKE-KTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEK 1847
Query: 197 SPVVPLPLPKTKT 235
SP P PK+ T
Sbjct: 1848 SPEKPEEKPKSPT 1860
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.7 bits (66), Expect = 1.1
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 4/158 (2%)
Frame = +2
Query: 8 SPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQI----VKKPSPAVFERSSSIKKT 175
S K V+S+ ++ ++ +P ++ S L I KK SP+ ++ S +KT
Sbjct: 1330 SVSKIEVVSKTDSQTDVREGTPKRRVSFAEEELPKEVIDSDRKKKKSPSPDKKEKSPEKT 1389
Query: 176 VESKTSNSPVVPLPLPKTKTNESTSALKXXXXXXXXXXXXXIELVNLETVTSPPLQLKSN 355
E S P KT E + K + E V SP + KS
Sbjct: 1390 EEKPAS---------PTKKTGEEVKSPKEKSPASPTKKE---KSPAAEEVKSPTKKEKSP 1437
Query: 356 ESQSKSDRNMHAKTLKRDDSIVREIPPKIEKLTLVAPE 469
S +K +++ + T K D + + PPK +PE
Sbjct: 1438 SSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +2
Query: 17 KTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSN 196
K+P + P + + + P K K + ++ +K P+ SS KKT +
Sbjct: 1789 KSPTKKEKSPEKVEEKPASPTKKE-KTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEK 1847
Query: 197 SPVVPLPLPKTKT 235
SP P PK+ T
Sbjct: 1848 SPEKPEEKPKSPT 1860
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.7 bits (66), Expect = 1.1
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 4/158 (2%)
Frame = +2
Query: 8 SPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQI----VKKPSPAVFERSSSIKKT 175
S K V+S+ ++ ++ +P ++ S L I KK SP+ ++ S +KT
Sbjct: 1330 SVSKIEVVSKTDSQTDVREGTPKRRVSFAEEELPKEVIDSDRKKKKSPSPDKKEKSPEKT 1389
Query: 176 VESKTSNSPVVPLPLPKTKTNESTSALKXXXXXXXXXXXXXIELVNLETVTSPPLQLKSN 355
E S P KT E + K + E V SP + KS
Sbjct: 1390 EEKPAS---------PTKKTGEEVKSPKEKSPASPTKKE---KSPAAEEVKSPTKKEKSP 1437
Query: 356 ESQSKSDRNMHAKTLKRDDSIVREIPPKIEKLTLVAPE 469
S +K +++ + T K D + + PPK +PE
Sbjct: 1438 SSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +2
Query: 17 KTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSN 196
K+P + P + + + P K K + ++ +K P+ SS KKT +
Sbjct: 1789 KSPTKKEKSPEKVEEKPASPTKKE-KTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEK 1847
Query: 197 SPVVPLPLPKTKT 235
SP P PK+ T
Sbjct: 1848 SPEKPEEKPKSPT 1860
>AL021503-5|CAA16416.2| 325|Caenorhabditis elegans Hypothetical
protein Y68A4A.9 protein.
Length = 325
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -3
Query: 517 ICAFIYGSSLSLILFYFGCNKRQFFDFWRNFTNDRII 407
+ AFI +S++LILF N +FD+ F N+ I+
Sbjct: 235 VVAFIIQTSVTLILFVVPVNSFIYFDYQNQFHNNLIV 271
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 17 KTPVLSREVPRSILQTSSPPKKGSIKLT--SLATSQIVKKPSPAVFERSSSIKKTVESKT 190
K P L+++ P + SP K IK + +VKKP P R S KK
Sbjct: 722 KDPKLAKKAPVKP-RDPSPMKAVPIKPAPKTEVPPAVVKKPEPVAKSRDPSPKKA--KAE 778
Query: 191 SNSPVVPLPLP 223
NSPVVP P P
Sbjct: 779 PNSPVVP-PTP 788
>AF039720-5|AAB96696.1| 408|Caenorhabditis elegans Hypothetical
protein F33D11.2 protein.
Length = 408
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +2
Query: 5 SSPPKTPVLSREVPRSILQTSSPPKKGSIKLTSL-ATSQIVKKPSPAVFERS--SSIKKT 175
S P TPVL PR+I + S I+L S A +IVK+P PA + + ++
Sbjct: 76 SPAPVTPVLENAKPRTIRKQKS---TAEIELDSKPAEPKIVKQPIPAANLKGQLGTKREK 132
Query: 176 VESKTSNSPVVPLPLPKTKTNESTSALK 259
K + VVP + T +S A K
Sbjct: 133 KAEKVKSELVVPQAEAQKNTPKSVVARK 160
>Z99286-1|CAH60792.1| 311|Caenorhabditis elegans Hypothetical
protein Y7A9C.7 protein.
Length = 311
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -3
Query: 586 FLCCFLK-FLNLITNSIRLLFL*FICAFI--YGSSLSLILFYFGCNKRQFFDFWRNFTND 416
F C ++ FL + + LL+L I + + L + L Y GCNKR F+ F+
Sbjct: 232 FKCTYIPTFLAFLLGELSLLYLVLFSLSIDFFTTPLIVELSYIGCNKRNMKTFFTAFSFR 291
Query: 415 RII 407
+ I
Sbjct: 292 KFI 294
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +2
Query: 2 ESSPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVE 181
++ PPKT R PR+ + + PP+ G T + + R+ + +T +
Sbjct: 762 KTEPPKTTTEKRITPRTEVPKTVPPRTGPPMTVPPGTEAPTTEAPMTITPRTEQL-RTEQ 820
Query: 182 SKTSNSPVVPLPLPKTK 232
+T S V PKTK
Sbjct: 821 LRTDQSKTV---TPKTK 834
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 35 REVPRSILQTSS--PPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVV 208
RE R +Q P + SI +S +TSQI +PS F +K ++S + S ++
Sbjct: 282 REWKRKYIQNDGYWKPPELSISASSSSTSQIDPEPSKTPFNEEQ--EKLLKSIINQSKII 339
Query: 209 PLPLPKTK 232
P+ TK
Sbjct: 340 PMMPRHTK 347
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 35 REVPRSILQTSS--PPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVV 208
RE R +Q P + SI +S +TSQI +PS F +K ++S + S ++
Sbjct: 282 REWKRKYIQNDGYWKPPELSISASSSSTSQIDPEPSKTPFNEEQ--EKLLKSIINQSKII 339
Query: 209 PLPLPKTK 232
P+ TK
Sbjct: 340 PMMPRHTK 347
>U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 3 protein.
Length = 378
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 311 NLETVTSPPLQLKSNESQSKSDRNMHAKTLKRDDSIVREIPPKIEKLTLVAPEIEQNKTE 490
N + + + LK +S SK K LKR DS E E+ + EIE+ + E
Sbjct: 245 NEQYIKDLEVALKEFQSLSKEYDKAKMKKLKRKDSSSDEDEEDEEENSSELSEIEEEEEE 304
Query: 491 TRPV 502
+PV
Sbjct: 305 VKPV 308
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 98 TSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVVPLPLPKTKTNESTSA 253
T LAT+ PSP R+++ T T+ +P+ P P P+T T A
Sbjct: 300 TPLATTSRPTTPSPTT-PRATTPLATTPLATTRAPLPPSPPPRTSKRPVTQA 350
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 28.7 bits (61), Expect = 4.5
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 3/165 (1%)
Frame = +2
Query: 2 ESSPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKK---PSPAVFERSSSIKK 172
E +P L + VPR + S P+K + A QI+KK + + E++ +K
Sbjct: 846 EPAPILRKSLRKPVPRILGDFGSYPEKNGSETAEKA--QILKKNGSETAEIAEKAQISEK 903
Query: 173 TVESKTSNSPVVPLPLPKTKTNESTSALKXXXXXXXXXXXXXIELVNLETVTSPPLQLKS 352
++ V+ P K E ++ + ++ + P K+
Sbjct: 904 KPVNRLVIDEVLKSPQKSEKIPEKAQEIEEIEESPKKSEKAPEKPQEIQEI--PKKSEKA 961
Query: 353 NESQSKSDRNMHAKTLKRDDSIVREIPPKIEKLTLVAPEIEQNKT 487
E + +++ K+ KR + ++EIP K EK + PEIE+ T
Sbjct: 962 PEKPQEIEKSPK-KSEKRQE--IQEIPQKSEKTSEKRPEIEELPT 1003
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 28.7 bits (61), Expect = 4.5
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 3/165 (1%)
Frame = +2
Query: 2 ESSPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKK---PSPAVFERSSSIKK 172
E +P L + VPR + S P+K + A QI+KK + + E++ +K
Sbjct: 844 EPAPILRKSLRKPVPRILGDFGSYPEKNGSETAEKA--QILKKNGSETAEIAEKAQISEK 901
Query: 173 TVESKTSNSPVVPLPLPKTKTNESTSALKXXXXXXXXXXXXXIELVNLETVTSPPLQLKS 352
++ V+ P K E ++ + ++ + P K+
Sbjct: 902 KPVNRLVIDEVLKSPQKSEKIPEKAQEIEEIEESPKKSEKAPEKPQEIQEI--PKKSEKA 959
Query: 353 NESQSKSDRNMHAKTLKRDDSIVREIPPKIEKLTLVAPEIEQNKT 487
E + +++ K+ KR + ++EIP K EK + PEIE+ T
Sbjct: 960 PEKPQEIEKSPK-KSEKRQE--IQEIPQKSEKTSEKRPEIEELPT 1001
>AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical
protein H20J18.1a protein.
Length = 947
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +2
Query: 44 PRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVESKTSNSPVVPLPLP 223
PR I SPP+ S T+ +T+ K+P V + S + T++ PV P+ +
Sbjct: 649 PRPIPLDPSPPRATSGGSTAASTASWAKEPIINVEDDKPSTSSGPSTTTASHPVNPIGIA 708
Query: 224 KTKTNESTSA 253
+ S +A
Sbjct: 709 NPLSAASAAA 718
>Z81057-3|CAB02916.1| 168|Caenorhabditis elegans Hypothetical
protein F10D11.4 protein.
Length = 168
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/80 (23%), Positives = 31/80 (38%)
Frame = +2
Query: 2 ESSPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVE 181
+ SPP P E + +PPK + S+ S K P+ + IKK +
Sbjct: 10 DPSPPPPPDSLSETSKVQNVQETPPKPAAPSQMSIDESNSKNKKLPSADKSVEEIKKPIS 69
Query: 182 SKTSNSPVVPLPLPKTKTNE 241
K S + L K ++ +
Sbjct: 70 HKKKKSLIKVLSKKKERSKK 89
>U23172-16|AAC46524.1| 757|Caenorhabditis elegans Hypothetical
protein F25B5.2 protein.
Length = 757
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 377 RNMHAKTLKRDDSIVREIPPKIEKLTLVAPEIEQNKTE 490
+N +TL DS PP E +T + PEI +K E
Sbjct: 104 KNAMLRTLVNRDSFTPVPPPDGESVTFILPEIGSSKLE 141
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 125 KKPSPAVFERSSSIKKTVESKTSNSPVVPLPLPKTKTNESTS 250
KKPS ++F KK + +S + +P+P + E+TS
Sbjct: 3073 KKPSASIFTALFGRKKEKKMTSSTAESSSIPIPSPENQEATS 3114
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 23 PVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIK 169
P++S P+SIL+ PP ++ S +KK P+ +++ + K
Sbjct: 3650 PIISGFKPKSILKPPKPPATWLFRIDSEGNKLYMKKLGPSDWQKKNDEK 3698
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 27.9 bits (59), Expect = 7.9
Identities = 29/152 (19%), Positives = 56/152 (36%), Gaps = 1/152 (0%)
Frame = +2
Query: 44 PRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFERSSSIKKTVES-KTSNSPVVPLPL 220
P++ T + P + ++T + KK +S+++ VE K
Sbjct: 194 PKTPTNTPAEPAEQVQEITGKKNKKNKKKSESEATAAPASVEQVVEQPKVVTEEPHQQAA 253
Query: 221 PKTKTNESTSALKXXXXXXXXXXXXXIELVNLETVTSPPLQLKSNESQSKSDRNMHAKTL 400
P+ K N+ K +E V +E+ T P + K + K T
Sbjct: 254 PQEKKNKKNKR-KSESENVPAASETPVEPV-VESTTPPATENKKKNKKDKKKSESEKVTE 311
Query: 401 KRDDSIVREIPPKIEKLTLVAPEIEQNKTETR 496
+ +S PP++E++ P +NK + +
Sbjct: 312 QPVESA--PAPPQVEQVVETTPPASENKKKNK 341
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +2
Query: 35 REVPRSILQTSSPPKKGSIKLTSLATSQIVKKPSPAVFER-SSSIKKTVESKTS-NSP-V 205
R++ + L TS+ + S LT ++ + S +R +S +KKT+++ S ++P
Sbjct: 167 RDLSENSLGTSTDHEDPS--LTFRVDKELEQSESKKTTKRPASGVKKTLKASISIDAPKP 224
Query: 206 VPLPLPKTKTNESTSALK 259
P P P+T N ST +K
Sbjct: 225 KPRPRPQTSANLSTKTIK 242
>AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical
protein B0546.2 protein.
Length = 436
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = +2
Query: 2 ESSPPKTPVLSREVPRSILQTSSPPKKGSIKLTSLATSQIVKK----PSPAVFERSSSIK 169
+S + S Q S P S +S A +I + PS +SS
Sbjct: 13 DSQQRSVSTIGSSAENSRQQLSGPSCSSSASSSSSAAKRIRSQEDGPPSKRWVLSASSTS 72
Query: 170 KTVESKT-SNSPVVPLPLPKTKTNESTS 250
T +S S+SPV+P P P+ + N S S
Sbjct: 73 STNKSPIPSSSPVLPPPQPEIEPNRSQS 100
>AF003139-10|AAB54160.3| 294|Caenorhabditis elegans Hypothetical
protein F53G12.4 protein.
Length = 294
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 620 MRRPRVSRLSSDAKDESPSVSSPAPQSDRINSVSS 724
M R R++RLS+ A+D+S SS + S S SS
Sbjct: 107 MERERLARLSNQAEDDSDDSSSSSDSSTSSASSSS 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,907,426
Number of Sequences: 27780
Number of extensions: 258788
Number of successful extensions: 1238
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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