Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1064
(506 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051830-1|AAK93254.1| 960|Drosophila melanogaster LD33689p pro... 29 2.7
AE013599-2168|AAF58070.2| 960|Drosophila melanogaster CG8405-PA... 29 2.7
U26714-1|AAA98542.1| 226|Drosophila melanogaster sodium channel... 28 6.3
M32078-6|AAB59190.1| 2110|Drosophila melanogaster sodium channel... 28 6.3
M32078-5|AAB59191.1| 2123|Drosophila melanogaster sodium channel... 28 6.3
M32078-4|AAB59192.1| 2077|Drosophila melanogaster sodium channel... 28 6.3
M32078-3|AAB59193.1| 2118|Drosophila melanogaster sodium channel... 28 6.3
M32078-2|AAB59194.1| 2121|Drosophila melanogaster sodium channel... 28 6.3
M32078-1|AAB59195.1| 2131|Drosophila melanogaster sodium channel... 28 6.3
BT010059-1|AAQ22528.1| 712|Drosophila melanogaster LD15480p pro... 28 6.3
AL022018-6|CAA17686.1| 712|Drosophila melanogaster EG:8D8.3 pro... 28 6.3
AE014298-2416|ABI30986.1| 2131|Drosophila melanogaster CG9907-PC... 28 6.3
AE014298-2415|ABI30985.1| 2131|Drosophila melanogaster CG9907-PB... 28 6.3
AE014298-2414|AAF48617.2| 2131|Drosophila melanogaster CG9907-PA... 28 6.3
AE014298-185|AAF45609.1| 712|Drosophila melanogaster CG12773-PA... 28 6.3
>AY051830-1|AAK93254.1| 960|Drosophila melanogaster LD33689p
protein.
Length = 960
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 263 AVS*HPVYYYIFLLNLLEKRSHEQAIK*LIRQ-DSILFIVEVKLLVGR*RLDST 105
A S +YYY +N+L+ H AI+ + D +IVE L G RL S+
Sbjct: 185 AYSNESLYYYFDAINILDTYDHPNAIQLKNEEDDEEQYIVEYSLEYGHLRLSSS 238
>AE013599-2168|AAF58070.2| 960|Drosophila melanogaster CG8405-PA
protein.
Length = 960
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 263 AVS*HPVYYYIFLLNLLEKRSHEQAIK*LIRQ-DSILFIVEVKLLVGR*RLDST 105
A S +YYY +N+L+ H AI+ + D +IVE L G RL S+
Sbjct: 185 AYSNESLYYYFDAINILDTYDHPNAIQLKNEEDDEEQYIVEYSLEYGHLRLSSS 238
>U26714-1|AAA98542.1| 226|Drosophila melanogaster sodium channel
protein protein.
Length = 226
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 287 LQSCKFWEARYQRRARAFVDPEHQL-FLILCFIAGFFL 397
L + FWE YQ RA P H L F+++ F+ F+L
Sbjct: 129 LMTQDFWEDLYQLVLRA-AGPWHMLFFIVIIFLGSFYL 165
>M32078-6|AAB59190.1| 2110|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2110
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 287 LQSCKFWEARYQRRARAFVDPEHQL-FLILCFIAGFFL 397
L + FWE YQ RA P H L F+++ F+ F+L
Sbjct: 384 LMTQDFWEDLYQLVLRA-AGPWHMLFFIVIIFLGSFYL 420
>M32078-5|AAB59191.1| 2123|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2123
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 287 LQSCKFWEARYQRRARAFVDPEHQL-FLILCFIAGFFL 397
L + FWE YQ RA P H L F+++ F+ F+L
Sbjct: 384 LMTQDFWEDLYQLVLRA-AGPWHMLFFIVIIFLGSFYL 420
>M32078-4|AAB59192.1| 2077|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2077
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 287 LQSCKFWEARYQRRARAFVDPEHQL-FLILCFIAGFFL 397
L + FWE YQ RA P H L F+++ F+ F+L
Sbjct: 384 LMTQDFWEDLYQLVLRA-AGPWHMLFFIVIIFLGSFYL 420
>M32078-3|AAB59193.1| 2118|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2118
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 287 LQSCKFWEARYQRRARAFVDPEHQL-FLILCFIAGFFL 397
L + FWE YQ RA P H L F+++ F+ F+L
Sbjct: 384 LMTQDFWEDLYQLVLRA-AGPWHMLFFIVIIFLGSFYL 420
>M32078-2|AAB59194.1| 2121|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2121
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 287 LQSCKFWEARYQRRARAFVDPEHQL-FLILCFIAGFFL 397
L + FWE YQ RA P H L F+++ F+ F+L
Sbjct: 384 LMTQDFWEDLYQLVLRA-AGPWHMLFFIVIIFLGSFYL 420
>M32078-1|AAB59195.1| 2131|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2131
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 287 LQSCKFWEARYQRRARAFVDPEHQL-FLILCFIAGFFL 397
L + FWE YQ RA P H L F+++ F+ F+L
Sbjct: 384 LMTQDFWEDLYQLVLRA-AGPWHMLFFIVIIFLGSFYL 420
>BT010059-1|AAQ22528.1| 712|Drosophila melanogaster LD15480p
protein.
Length = 712
Score = 28.3 bits (60), Expect = 6.3
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Frame = +2
Query: 242 ILGVRKP-HPKPKNWYLQSCKFWEARYQRRARAFVD-PEHQLFLILCFIAGFFLTLWDVN 415
I +R P H K KNWY C W + + V + + + CF+ F + + V
Sbjct: 573 IAPIRPPIHSKTKNWYSGYCNRWASLLGAFTKLLVMLLVNWYYALTCFLVVFVVWFY-VG 631
Query: 416 NANK------TF*NSFFFKLGSIFLRPIGK 487
AN T +FF L S+ R GK
Sbjct: 632 TANPAVKPGLTAEFNFFAWLKSVIFRCFGK 661
>AL022018-6|CAA17686.1| 712|Drosophila melanogaster EG:8D8.3
protein.
Length = 712
Score = 28.3 bits (60), Expect = 6.3
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Frame = +2
Query: 242 ILGVRKP-HPKPKNWYLQSCKFWEARYQRRARAFVD-PEHQLFLILCFIAGFFLTLWDVN 415
I +R P H K KNWY C W + + V + + + CF+ F + + V
Sbjct: 573 IAPIRPPIHSKTKNWYSGYCNRWASLLGAFTKLLVMLLVNWYYALTCFLVVFVVWFY-VG 631
Query: 416 NANK------TF*NSFFFKLGSIFLRPIGK 487
AN T +FF L S+ R GK
Sbjct: 632 TANPAVKPGLTAEFNFFAWLKSVIFRCFGK 661
>AE014298-2416|ABI30986.1| 2131|Drosophila melanogaster CG9907-PC,
isoform C protein.
Length = 2131
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 287 LQSCKFWEARYQRRARAFVDPEHQL-FLILCFIAGFFL 397
L + FWE YQ RA P H L F+++ F+ F+L
Sbjct: 384 LMTQDFWEDLYQLVLRA-AGPWHMLFFIVIIFLGSFYL 420
>AE014298-2415|ABI30985.1| 2131|Drosophila melanogaster CG9907-PB,
isoform B protein.
Length = 2131
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 287 LQSCKFWEARYQRRARAFVDPEHQL-FLILCFIAGFFL 397
L + FWE YQ RA P H L F+++ F+ F+L
Sbjct: 384 LMTQDFWEDLYQLVLRA-AGPWHMLFFIVIIFLGSFYL 420
>AE014298-2414|AAF48617.2| 2131|Drosophila melanogaster CG9907-PA,
isoform A protein.
Length = 2131
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 287 LQSCKFWEARYQRRARAFVDPEHQL-FLILCFIAGFFL 397
L + FWE YQ RA P H L F+++ F+ F+L
Sbjct: 384 LMTQDFWEDLYQLVLRA-AGPWHMLFFIVIIFLGSFYL 420
>AE014298-185|AAF45609.1| 712|Drosophila melanogaster CG12773-PA
protein.
Length = 712
Score = 28.3 bits (60), Expect = 6.3
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Frame = +2
Query: 242 ILGVRKP-HPKPKNWYLQSCKFWEARYQRRARAFVD-PEHQLFLILCFIAGFFLTLWDVN 415
I +R P H K KNWY C W + + V + + + CF+ F + + V
Sbjct: 573 IAPIRPPIHSKTKNWYSGYCNRWASLLGAFTKLLVMLLVNWYYALTCFLVVFVVWFY-VG 631
Query: 416 NANK------TF*NSFFFKLGSIFLRPIGK 487
AN T +FF L S+ R GK
Sbjct: 632 TANPAVKPGLTAEFNFFAWLKSVIFRCFGK 661
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,437,183
Number of Sequences: 53049
Number of extensions: 404531
Number of successful extensions: 974
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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