Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1063
(689 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL096773-5|CAI18825.1| 798|Homo sapiens cold shock domain conta... 113 7e-25
AB020692-1|BAA74908.2| 826|Homo sapiens KIAA0885 protein protein. 113 7e-25
BC032446-1|AAH32446.1| 767|Homo sapiens cold shock domain conta... 111 2e-24
AY049788-1|AAL15445.1| 708|Homo sapiens NRAS-related protein pr... 111 2e-24
AL096773-4|CAI18826.1| 767|Homo sapiens cold shock domain conta... 111 2e-24
AF070542-1|AAC28634.1| 467|Homo sapiens unknown protein. 111 2e-24
AK022528-1|BAB14080.1| 767|Homo sapiens protein ( Homo sapiens ... 109 1e-23
AK022516-1|BAB14073.1| 767|Homo sapiens protein ( Homo sapiens ... 109 1e-23
AK131495-1|BAD18639.1| 140|Homo sapiens protein ( Homo sapiens ... 75 3e-13
AL050150-1|CAB43294.1| 369|Homo sapiens hypothetical protein pr... 48 3e-05
BC021692-1|AAH21692.1| 272|Homo sapiens CSDE1 protein protein. 45 3e-04
AL110192-1|CAB53670.1| 171|Homo sapiens hypothetical protein pr... 37 0.059
BC117135-1|AAI17136.1| 1233|Homo sapiens SEC24 related gene fami... 30 8.9
BC040137-1|AAH40137.1| 1268|Homo sapiens SEC24 related gene fami... 30 8.9
AJ131245-1|CAA10335.1| 1268|Homo sapiens Sec24B protein protein. 30 8.9
>AL096773-5|CAI18825.1| 798|Homo sapiens cold shock domain
containing E1, RNA-binding protein.
Length = 798
Score = 113 bits (271), Expect = 7e-25
Identities = 54/82 (65%), Positives = 65/82 (79%)
Frame = +3
Query: 444 IRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPI 623
+RETG+IEKLL SYGFIQC ERQARLFFH SQ++GN + LK+GD VEFE++ DRRTGKPI
Sbjct: 24 LRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPI 83
Query: 624 ASTVTKIAPEVVLSEARVTGTV 689
A + KI E +L E R+ G V
Sbjct: 84 AVKLVKIKQE-ILPEERMNGQV 104
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQ-FSGNTEHLKIGDPVEFEMTYD 602
RE G+I + +GFI+C +R R+FFHFS+ GN H I D VEF + D
Sbjct: 348 REMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLH--IADEVEFTVVPD 398
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +3
Query: 456 GIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPIASTV 635
G++ + ++GFI+ + +FFH+S+F G+ E L+ GD VEF T R GK +A+ V
Sbjct: 188 GVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEF--TIKDRNGKEVATDV 245
Query: 636 TKIAPEVVLSE 668
+ V+ E
Sbjct: 246 RLLPQGTVIFE 256
Score = 48.0 bits (109), Expect = 3e-05
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMT 596
R G + L ++GFI+ +FFH+S+FSG+ + L++GD VE+ ++
Sbjct: 518 RLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLS 567
Score = 37.1 bits (82), Expect = 0.059
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 432 NHPPIRETGIIEKLLHSYGFIQC-CERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRR 608
N P+R +E + +GFI +LFFH + E L+ GD VEF + ++R
Sbjct: 669 NITPLRRA-TVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIE-LQAGDEVEFSVILNQR 726
Query: 609 TGKPIASTVTKI 644
TGK A V ++
Sbjct: 727 TGKCSACNVWRV 738
>AB020692-1|BAA74908.2| 826|Homo sapiens KIAA0885 protein protein.
Length = 826
Score = 113 bits (271), Expect = 7e-25
Identities = 54/82 (65%), Positives = 65/82 (79%)
Frame = +3
Query: 444 IRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPI 623
+RETG+IEKLL SYGFIQC ERQARLFFH SQ++GN + LK+GD VEFE++ DRRTGKPI
Sbjct: 52 LRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPI 111
Query: 624 ASTVTKIAPEVVLSEARVTGTV 689
A + KI E +L E R+ G V
Sbjct: 112 AVKLVKIKQE-ILPEERMNGQV 132
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQ-FSGNTEHLKIGDPVEFEMTYD 602
RE G+I + +GFI+C +R R+FFHFS+ GN H I D VEF + D
Sbjct: 376 REMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLH--IADEVEFTVVPD 426
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +3
Query: 456 GIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPIASTV 635
G++ + ++GFI+ + +FFH+S+F G+ E L+ GD VEF T R GK +A+ V
Sbjct: 216 GVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEF--TIKDRNGKEVATDV 273
Query: 636 TKIAPEVVLSE 668
+ V+ E
Sbjct: 274 RLLPQGTVIFE 284
Score = 48.0 bits (109), Expect = 3e-05
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMT 596
R G + L ++GFI+ +FFH+S+FSG+ + L++GD VE+ ++
Sbjct: 546 RLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLS 595
Score = 37.1 bits (82), Expect = 0.059
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 432 NHPPIRETGIIEKLLHSYGFIQC-CERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRR 608
N P+R +E + +GFI +LFFH + E L+ GD VEF + ++R
Sbjct: 697 NITPLRRA-TVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIE-LQAGDEVEFSVILNQR 754
Query: 609 TGKPIASTVTKI 644
TGK A V ++
Sbjct: 755 TGKCSACNVWRV 766
>BC032446-1|AAH32446.1| 767|Homo sapiens cold shock domain
containing E1, RNA-binding protein.
Length = 767
Score = 111 bits (268), Expect = 2e-24
Identities = 53/80 (66%), Positives = 64/80 (80%)
Frame = +3
Query: 444 IRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPI 623
+RETG+IEKLL SYGFIQC ERQARLFFH SQ++GN + LK+GD VEFE++ DRRTGKPI
Sbjct: 24 LRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPI 83
Query: 624 ASTVTKIAPEVVLSEARVTG 683
A + KI E +L E R+ G
Sbjct: 84 AVKLVKIKQE-ILPEERMNG 102
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQ-FSGNTEHLKIGDPVEFEMTYD 602
RE G+I + +GFI+C +R R+FFHFS+ GN H I D VEF + D
Sbjct: 317 REMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLH--IADEVEFTVVPD 367
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +3
Query: 456 GIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPIASTV 635
G++ + ++GFI+ + +FFH+S+F G+ E L+ GD VEF T R GK +A+ V
Sbjct: 157 GVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEF--TIKDRNGKEVATDV 214
Query: 636 TKIAPEVVLSE 668
+ V+ E
Sbjct: 215 RLLPQGTVIFE 225
Score = 48.0 bits (109), Expect = 3e-05
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMT 596
R G + L ++GFI+ +FFH+S+FSG+ + L++GD VE+ ++
Sbjct: 487 RLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLS 536
Score = 37.1 bits (82), Expect = 0.059
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 432 NHPPIRETGIIEKLLHSYGFIQC-CERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRR 608
N P+R +E + +GFI +LFFH + E L+ GD VEF + ++R
Sbjct: 638 NITPLRRA-TVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIE-LQAGDEVEFSVILNQR 695
Query: 609 TGKPIASTVTKI 644
TGK A V ++
Sbjct: 696 TGKCSACNVWRV 707
>AY049788-1|AAL15445.1| 708|Homo sapiens NRAS-related protein
protein.
Length = 708
Score = 111 bits (268), Expect = 2e-24
Identities = 53/80 (66%), Positives = 64/80 (80%)
Frame = +3
Query: 444 IRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPI 623
+RETG+IEKLL SYGFIQC ERQARLFFH SQ++GN + LK+GD VEFE++ DRRTGKPI
Sbjct: 24 LRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPI 83
Query: 624 ASTVTKIAPEVVLSEARVTG 683
A + KI E +L E R+ G
Sbjct: 84 AVKLVKIKQE-ILPEERMNG 102
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQ-FSGNTEHLKIGDPVEFEMTYD 602
RE G+I + +GFI+C +R R+FFHFS+ GN H I D VEF + D
Sbjct: 317 REMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLH--IADEVEFTVVPD 367
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +3
Query: 456 GIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPIASTV 635
G++ + ++GFI+ + +FFH+S+F G+ E L+ GD VEF T R GK +A+ V
Sbjct: 157 GVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEF--TIKDRNGKEVATDV 214
Query: 636 TKIAPEVVLSE 668
+ V+ E
Sbjct: 215 RLLPQGTVIFE 225
Score = 48.0 bits (109), Expect = 3e-05
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMT 596
R G + L ++GFI+ +FFH+S+FSG+ + L++GD VE+ ++
Sbjct: 487 RLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLS 536
Score = 37.1 bits (82), Expect = 0.059
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 432 NHPPIRETGIIEKLLHSYGFIQC-CERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRR 608
N P+R +E + +GFI +LFFH + E L+ GD VEF + ++R
Sbjct: 638 NITPLRRA-TVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIE-LQAGDEVEFSVILNQR 695
Query: 609 TGKPIASTVTKI 644
TGK A V ++
Sbjct: 696 TGKCSACNVWRV 707
>AL096773-4|CAI18826.1| 767|Homo sapiens cold shock domain
containing E1, RNA-binding protein.
Length = 767
Score = 111 bits (268), Expect = 2e-24
Identities = 53/80 (66%), Positives = 64/80 (80%)
Frame = +3
Query: 444 IRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPI 623
+RETG+IEKLL SYGFIQC ERQARLFFH SQ++GN + LK+GD VEFE++ DRRTGKPI
Sbjct: 24 LRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPI 83
Query: 624 ASTVTKIAPEVVLSEARVTG 683
A + KI E +L E R+ G
Sbjct: 84 AVKLVKIKQE-ILPEERMNG 102
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQ-FSGNTEHLKIGDPVEFEMTYD 602
RE G+I + +GFI+C +R R+FFHFS+ GN H I D VEF + D
Sbjct: 317 REMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLH--IADEVEFTVVPD 367
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +3
Query: 456 GIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPIASTV 635
G++ + ++GFI+ + +FFH+S+F G+ E L+ GD VEF T R GK +A+ V
Sbjct: 157 GVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEF--TIKDRNGKEVATDV 214
Query: 636 TKIAPEVVLSE 668
+ V+ E
Sbjct: 215 RLLPQGTVIFE 225
Score = 48.0 bits (109), Expect = 3e-05
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMT 596
R G + L ++GFI+ +FFH+S+FSG+ + L++GD VE+ ++
Sbjct: 487 RLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLS 536
Score = 37.1 bits (82), Expect = 0.059
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 432 NHPPIRETGIIEKLLHSYGFIQC-CERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRR 608
N P+R +E + +GFI +LFFH + E L+ GD VEF + ++R
Sbjct: 638 NITPLRRA-TVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIE-LQAGDEVEFSVILNQR 695
Query: 609 TGKPIASTVTKI 644
TGK A V ++
Sbjct: 696 TGKCSACNVWRV 707
>AF070542-1|AAC28634.1| 467|Homo sapiens unknown protein.
Length = 467
Score = 111 bits (268), Expect = 2e-24
Identities = 53/80 (66%), Positives = 64/80 (80%)
Frame = +3
Query: 444 IRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPI 623
+RETG+IEKLL SYGFIQC ERQARLFFH SQ++GN + LK+GD VEFE++ DRRTGKPI
Sbjct: 24 LRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPI 83
Query: 624 ASTVTKIAPEVVLSEARVTG 683
A + KI E +L E R+ G
Sbjct: 84 AVKLVKIKQE-ILPEERMNG 102
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQ-FSGNTEHLKIGDPVEFEMTYD 602
RE G+I + +GFI+C +R R+FFHFS+ GN H I D VEF + D
Sbjct: 317 REMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLH--IADEVEFTVVPD 367
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +3
Query: 456 GIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPIASTV 635
G++ + ++GFI+ + +FFH+S+F G+ E L+ GD VEF T R GK +A+ V
Sbjct: 157 GVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEF--TIKDRNGKEVATDV 214
Query: 636 TKIAPEVVLSE 668
+ V+ E
Sbjct: 215 RLLPQGTVIFE 225
>AK022528-1|BAB14080.1| 767|Homo sapiens protein ( Homo sapiens
cDNA FLJ12466 fis, clone NT2RM1000826, highly similar to
UNR PROTEIN. ).
Length = 767
Score = 109 bits (261), Expect = 1e-23
Identities = 52/80 (65%), Positives = 63/80 (78%)
Frame = +3
Query: 444 IRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPI 623
+RETG+I KLL SYGFIQC ERQARLFFH SQ++GN + LK+GD VEFE++ DRRTGKPI
Sbjct: 24 LRETGVIVKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPI 83
Query: 624 ASTVTKIAPEVVLSEARVTG 683
A + KI E +L E R+ G
Sbjct: 84 AVKLVKIKQE-ILPEERMNG 102
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQ-FSGNTEHLKIGDPVEFEMTYD 602
RE G+I + +GFI+C +R R+FFHFS+ GN H I D VEF + D
Sbjct: 317 REMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLH--IADEVEFTVVPD 367
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +3
Query: 456 GIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPIASTV 635
G++ + ++GFI+ + +FFH+S+F G+ E L+ GD VEF T R GK +A+ V
Sbjct: 157 GVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEF--TIKDRNGKEVATDV 214
Query: 636 TKIAPEVVLSE 668
+ V+ E
Sbjct: 215 RLLPQGTVIFE 225
Score = 48.0 bits (109), Expect = 3e-05
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMT 596
R G + L ++GFI+ +FFH+S+FSG+ + L++GD VE+ ++
Sbjct: 487 RLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLS 536
Score = 37.1 bits (82), Expect = 0.059
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 432 NHPPIRETGIIEKLLHSYGFIQC-CERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRR 608
N P+R +E + +GFI +LFFH + E L+ GD VEF + ++R
Sbjct: 638 NITPLRRA-TVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIE-LQAGDEVEFSVILNQR 695
Query: 609 TGKPIASTVTKI 644
TGK A V ++
Sbjct: 696 TGKCSACNVWRV 707
>AK022516-1|BAB14073.1| 767|Homo sapiens protein ( Homo sapiens
cDNA FLJ12454 fis, clone NT2RM1000555, highly similar to
UNR PROTEIN. ).
Length = 767
Score = 109 bits (261), Expect = 1e-23
Identities = 52/80 (65%), Positives = 63/80 (78%)
Frame = +3
Query: 444 IRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPI 623
+RETG+I KLL SYGFIQC ERQARLFFH SQ++GN + LK+GD VEFE++ DRRTGKPI
Sbjct: 24 LRETGVIVKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPI 83
Query: 624 ASTVTKIAPEVVLSEARVTG 683
A + KI E +L E R+ G
Sbjct: 84 AVKLVKIKQE-ILPEERMNG 102
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQ-FSGNTEHLKIGDPVEFEMTYD 602
RE G+I + +GFI+C +R R+FFHFS+ GN H I D VEF + D
Sbjct: 317 REMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLH--IADEVEFTVVPD 367
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +3
Query: 456 GIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRRTGKPIASTV 635
G++ + ++GFI+ + +FFH+S+F G+ E L+ GD VEF T R GK +A+ V
Sbjct: 157 GVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEF--TIKDRNGKEVATDV 214
Query: 636 TKIAPEVVLSE 668
+ V+ E
Sbjct: 215 RLLPQGTVIFE 225
Score = 48.0 bits (109), Expect = 3e-05
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMT 596
R G + L ++GFI+ +FFH+S+FSG+ + L++GD VE+ ++
Sbjct: 487 RLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLS 536
Score = 37.1 bits (82), Expect = 0.059
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 432 NHPPIRETGIIEKLLHSYGFIQC-CERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRR 608
N P+R +E + +GFI +LFFH + E L+ GD VEF + ++R
Sbjct: 638 NITPLRRA-TVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIE-LQAGDEVEFSVILNQR 695
Query: 609 TGKPIASTVTKI 644
TGK A V ++
Sbjct: 696 TGKCSACNVWRV 707
>AK131495-1|BAD18639.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ16692 fis, clone TRACH3002561, moderately
similar to UNR protein. ).
Length = 140
Score = 74.5 bits (175), Expect = 3e-13
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 444 IRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIG 572
+RETG+IEKLL SYGFIQC ERQARLFFH SQ++GN + LK+G
Sbjct: 34 LRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVG 76
>AL050150-1|CAB43294.1| 369|Homo sapiens hypothetical protein
protein.
Length = 369
Score = 48.0 bits (109), Expect = 3e-05
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 447 RETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMT 596
R G + L ++GFI+ +FFH+S+FSG+ + L++GD VE+ ++
Sbjct: 89 RLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLS 138
Score = 37.1 bits (82), Expect = 0.059
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 432 NHPPIRETGIIEKLLHSYGFIQC-CERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRR 608
N P+R +E + +GFI +LFFH + E L+ GD VEF + ++R
Sbjct: 240 NITPLRRA-TVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIE-LQAGDEVEFSVILNQR 297
Query: 609 TGKPIASTVTKI 644
TGK A V ++
Sbjct: 298 TGKCSACNVWRV 309
>BC021692-1|AAH21692.1| 272|Homo sapiens CSDE1 protein protein.
Length = 272
Score = 44.8 bits (101), Expect = 3e-04
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = +3
Query: 480 SYGFIQCCERQARLFFHFSQFSGNTEHLKIGDPVEFEMT 596
++GFI+ +FFH+S+FSG+ + L++GD VE+ ++
Sbjct: 3 NFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLS 41
Score = 37.1 bits (82), Expect = 0.059
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 432 NHPPIRETGIIEKLLHSYGFIQC-CERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRR 608
N P+R +E + +GFI +LFFH + E L+ GD VEF + ++R
Sbjct: 143 NITPLRRA-TVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIE-LQAGDEVEFSVILNQR 200
Query: 609 TGKPIASTVTKI 644
TGK A V ++
Sbjct: 201 TGKCSACNVWRV 212
>AL110192-1|CAB53670.1| 171|Homo sapiens hypothetical protein
protein.
Length = 171
Score = 37.1 bits (82), Expect = 0.059
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 432 NHPPIRETGIIEKLLHSYGFIQC-CERQARLFFHFSQFSGNTEHLKIGDPVEFEMTYDRR 608
N P+R +E + +GFI +LFFH + E L+ GD VEF + ++R
Sbjct: 42 NITPLRRA-TVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIE-LQAGDEVEFSVILNQR 99
Query: 609 TGKPIASTVTKI 644
TGK A V ++
Sbjct: 100 TGKCSACNVWRV 111
>BC117135-1|AAI17136.1| 1233|Homo sapiens SEC24 related gene family,
member B (S. cerevisiae) protein.
Length = 1233
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 183 SHSSPLQDILDLQHSNMQHKSSYRNGTYSSEYPSSPRDN 299
SH SPL + QH Q S Y T+SS S +DN
Sbjct: 235 SHPSPLPPLPSQQHHQQQSLSGYSTLTWSSPGLPSTQDN 273
>BC040137-1|AAH40137.1| 1268|Homo sapiens SEC24 related gene family,
member B (S. cerevisiae) protein.
Length = 1268
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 183 SHSSPLQDILDLQHSNMQHKSSYRNGTYSSEYPSSPRDN 299
SH SPL + QH Q S Y T+SS S +DN
Sbjct: 235 SHPSPLPPLPSQQHHQQQSLSGYSTLTWSSPGLPSTQDN 273
>AJ131245-1|CAA10335.1| 1268|Homo sapiens Sec24B protein protein.
Length = 1268
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 183 SHSSPLQDILDLQHSNMQHKSSYRNGTYSSEYPSSPRDN 299
SH SPL + QH Q S Y T+SS S +DN
Sbjct: 235 SHPSPLPPLPSQQHHQQQSLSGYSTLTWSSPGLPSTQDN 273
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,862,573
Number of Sequences: 237096
Number of extensions: 2278386
Number of successful extensions: 8776
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8776
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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