Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1057
         (332 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   2.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   2.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   2.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   6.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   6.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   9.1  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 249 DPELDVDKSGFRNFTSLRSKHPDVSSWS 332
           DPE    ++  R  +SL SK   V +WS
Sbjct: 175 DPEYSARENELRALSSLFSKGCLVGTWS 202


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 249 DPELDVDKSGFRNFTSLRSKHPDVSSWS 332
           DPE    ++  R  +SL SK   V +WS
Sbjct: 175 DPEYSARENELRALSSLFSKGCLVGTWS 202


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 249 DPELDVDKSGFRNFTSLRSKHPDVSSWS 332
           DPE    ++  R  +SL SK   V +WS
Sbjct: 175 DPEYSARENELRALSSLFSKGCLVGTWS 202


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 296 GCEVTKPTLIYVQLRIDN 243
           GCEV  P   Y+QL I+N
Sbjct: 314 GCEVLCPLYKYLQL-IEN 330


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 296 GCEVTKPTLIYVQLRIDN 243
           GCEV  P   Y+QL I+N
Sbjct: 329 GCEVLCPLYKYLQL-IEN 345


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 143 GSVHRPITEVTNDARSAVRTLN 78
           G  + P TEV ND +  +  LN
Sbjct: 362 GVKYIPNTEVFNDTKITITGLN 383


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,777
Number of Sequences: 438
Number of extensions: 1776
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)