Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1056
         (401 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033391-1|AAH33391.1|  467|Homo sapiens GDPD5 protein protein.        29   5.8  
AK130723-1|BAC85414.1|  155|Homo sapiens protein ( Homo sapiens ...    29   5.8  

>BC033391-1|AAH33391.1|  467|Homo sapiens GDPD5 protein protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 280 VPNLHAPDLVPDRRVQSFRAQDQQKQYGVQ 191
           + N  AP L P+  + SFR   +QK YG+Q
Sbjct: 93  IGNRGAPMLAPEHTLMSFRKALEQKLYGLQ 122


>AK130723-1|BAC85414.1|  155|Homo sapiens protein ( Homo sapiens
           cDNA FLJ27213 fis, clone SYN03652. ).
          Length = 155

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 190 CCVCRPRGQVHRRACVQSLGESA*GFALIFPF 95
           CC+C P   +H  AC   +G SA G  L+ PF
Sbjct: 119 CCLCSPPAGLHTNAC-DDIGPSASG-DLLHPF 148


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.311    0.133    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,270,949
Number of Sequences: 237096
Number of extensions: 906516
Number of successful extensions: 2097
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2097
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)