Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1054
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93239-1|CAB07528.1|  512|Caenorhabditis elegans Hypothetical pr...   206   8e-54
AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AL110478-6|CAE17957.2|  952|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical pr...    28   4.9  

>Z93239-1|CAB07528.1|  512|Caenorhabditis elegans Hypothetical
           protein H03A11.1 protein.
          Length = 512

 Score =  206 bits (504), Expect = 8e-54
 Identities = 90/158 (56%), Positives = 115/158 (72%)
 Frame = +3

Query: 159 NLEKFQLKIAQHELYEDGEILVEAILKDMATLPVLHAEQKEGGTQLKLIIDYPNGVQALF 338
           N E+F   I    +Y D + +++ +L D+ T P+ H    +GGTQ+K +  + N  QA+F
Sbjct: 133 NWERFYSNIGSCSVYSDDQ-MIDNLLHDLNTSPIKHVHIMDGGTQVKFVFTFKNDKQAVF 191

Query: 339 KPMRFARDVQTLPNHFYFSDYERHNAEIAAFHLDRILGFRRAMPVVGRVLNMTTEIYDVT 518
           KPMRF RD ++ PNHFYFSD+ERH+AEIA FHLDR+LGFRRA+P VGRVLNMTTE+++  
Sbjct: 192 KPMRFGRDYESDPNHFYFSDFERHHAEIATFHLDRVLGFRRAIPTVGRVLNMTTELFEKA 251

Query: 519 EGDILKTFFVSPANNFCFHGKCSYYCDTGHAICGNPDM 632
           E  + KTFF SPA NFCF  +C YYCDT HAICG PDM
Sbjct: 252 EKKLKKTFFFSPAKNFCFVSRCDYYCDTTHAICGLPDM 289


>AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical
           protein Y40C7B.1 protein.
          Length = 916

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 276 KEGGTQLKLIIDYPNGVQALFKPMRFARD 362
           K   T  K+ +DYPN   +LF P RF ++
Sbjct: 46  KTWSTNNKITVDYPNRFTSLFTPKRFYKE 74


>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
           protein F09C3.1 protein.
          Length = 1391

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +3

Query: 399 YERHNAEIAAFHLDRILGFRRAMPVVGRVLNMTTEIYDVTEGDILKTFF 545
           Y +++A     H D I+ +RRAM  V        E  DV EG  +KT F
Sbjct: 105 YRQNDATPVYRHSDNIMQWRRAMESVRLPEIFIPETADVFEGRNMKTVF 153


>AL110478-6|CAE17957.2|  952|Caenorhabditis elegans Hypothetical
           protein Y26D4A.14 protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 276 KEGGTQLKLIIDYPNGVQALFKPMRFARD 362
           K   T  K+ +DYPN   +LF P R+ ++
Sbjct: 46  KTWSTNNKITVDYPNRFTSLFTPKRYYKE 74


>Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical
           protein Y6G8.1 protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 444 ILGFRRAMPVVGRVLNMTTEIYDVTEGDILKTFFVSPANNFCFHGKCSYY 593
           ++GF   + V   +L     I  V      KT F S  N+FCF  K SY+
Sbjct: 24  LIGFVVLIVVYTTLLPFYLRINQVNRERDNKTLFFSITNHFCFLVKTSYF 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,893,392
Number of Sequences: 27780
Number of extensions: 270697
Number of successful extensions: 636
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)