BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-1054 (637 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 5.7 DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 7.6 AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 7.6 >DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 21.8 bits (44), Expect = 5.7 Identities = 8/37 (21%), Positives = 21/37 (56%) Frame = +3 Query: 363 VQTLPNHFYFSDYERHNAEIAAFHLDRILGFRRAMPV 473 + +L N++ +S+Y +N + ++++ I +PV Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINHIEQIPVPVPV 118 >DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel protein. Length = 489 Score = 21.4 bits (43), Expect = 7.6 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = +3 Query: 9 TYNKSCSLSYRGP 47 TY ++ L YRGP Sbjct: 421 TYGRNAGLRYRGP 433 >AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera ORF for hypotheticalprotein. ). Length = 998 Score = 21.4 bits (43), Expect = 7.6 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +3 Query: 270 EQKEGGTQLKLIIDYPNGVQALFKP 344 +Q+ GG + L+ + G ALF P Sbjct: 42 QQRRGGLEYFLLSAFLFGANALFTP 66 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 167,417 Number of Sequences: 438 Number of extensions: 3336 Number of successful extensions: 10 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19071468 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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