Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1052
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical ... 108 3e-24
AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix metall... 108 3e-24
U41266-1|AAM48565.1| 521|Caenorhabditis elegans Zinc metallopro... 83 1e-16
AB007817-1|BAA28353.1| 521|Caenorhabditis elegans matrix metall... 83 1e-16
Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical ... 69 3e-12
U00038-1|AAA50663.2| 279|Caenorhabditis elegans Hypothetical pr... 69 4e-12
AF099191-1|AAF78096.1| 279|Caenorhabditis elegans MMP-like prot... 69 4e-12
AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical ... 63 2e-10
AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix metall... 60 1e-09
Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 32 0.38
U41014-3|AAK32948.1| 519|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily a... 29 3.5
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 29 3.5
>AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical
protein C31B8.8 protein.
Length = 579
Score = 108 bits (260), Expect = 3e-24
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Frame = +1
Query: 151 QSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEGWNKR 330
Q A++K Q FAG+ +TG LD TK RCG+ D + + ++ W+K
Sbjct: 88 QVFKSAIRKFQEFAGIAKTGFLDAATKAKMALSRCGVTDAPLALTSGSSQF----KWSKT 143
Query: 331 EVTYRLLNGSSTMSKDRIERLLENGLEVWAPHGNLHFTKLDEGK-ADIQVYFASGNHGDG 507
+TY + + SS +SKD + R + +W+ L F+++ G +DI++ F NH D
Sbjct: 144 RLTYSIESWSSDLSKDDVRRAISEAYGLWSKVTPLEFSEVPAGSTSDIKIRFGVRNHNDP 203
Query: 508 FPFDGPGRVVAHAFPPPLGDIHFDDDETW 594
+PFDG G V+AHA P G HFDDDE W
Sbjct: 204 WPFDGEGGVLAHATMPESGMFHFDDDENW 232
>AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 579
Score = 108 bits (260), Expect = 3e-24
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Frame = +1
Query: 151 QSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEGWNKR 330
Q A++K Q FAG+ +TG LD TK RCG+ D + + ++ W+K
Sbjct: 88 QVFKSAIRKFQEFAGIAKTGFLDAATKAKMALSRCGVTDAPLALTSGSSQF----KWSKT 143
Query: 331 EVTYRLLNGSSTMSKDRIERLLENGLEVWAPHGNLHFTKLDEGK-ADIQVYFASGNHGDG 507
+TY + + SS +SKD + R + +W+ L F+++ G +DI++ F NH D
Sbjct: 144 RLTYSIESWSSDLSKDDVRRAISEAYGLWSKVTPLEFSEVPAGSTSDIKIRFGVRNHNDP 203
Query: 508 FPFDGPGRVVAHAFPPPLGDIHFDDDETW 594
+PFDG G V+AHA P G HFDDDE W
Sbjct: 204 WPFDGEGGVLAHATMPESGMFHFDDDENW 232
>U41266-1|AAM48565.1| 521|Caenorhabditis elegans Zinc
metalloprotease protein 1 protein.
Length = 521
Score = 83.4 bits (197), Expect = 1e-16
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 4/174 (2%)
Frame = +1
Query: 73 LDEVNFLLQYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKR 252
+D FL +YGYL+ +S+S+S+A+K MQ AGL +TG LD T Q+ +R R
Sbjct: 24 VDHTKFLQKYGYLTSG----DNQLSSESLSDALKNMQRMAGLEETGELDERTIQMMERPR 79
Query: 253 CGLKDIDEDSHARNRRYI-IQEGWNKREVTY--RLLNGSSTMSKDRIERLLENGLEVWAP 423
CG D+++ +R +RY Q W ++ +TY + + S+ +S D + R + W+
Sbjct: 80 CGHPDVEDHQKSRGKRYAPPQFKWKEKIITYGCKAVGTSTRISLDDLRRTMHQAASQWSE 139
Query: 424 HGNLHFTKLDEGKADIQVYFASGNHGD-GFPFDGPGRVVAHAFPPPLGDIHFDD 582
++ + + + NH FD + +AHAF P G IH +D
Sbjct: 140 LADVEIVESSVKNPMMVISAGRENHYPCTVRFD--TKTLAHAFFPTNGQIHIND 191
>AB007817-1|BAA28353.1| 521|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 521
Score = 83.4 bits (197), Expect = 1e-16
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 4/174 (2%)
Frame = +1
Query: 73 LDEVNFLLQYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKR 252
+D FL +YGYL+ +S+S+S+A+K MQ AGL +TG LD T Q+ +R R
Sbjct: 24 VDHTKFLQKYGYLTSG----DNQLSSESLSDALKNMQRMAGLEETGELDERTIQMMERPR 79
Query: 253 CGLKDIDEDSHARNRRYI-IQEGWNKREVTY--RLLNGSSTMSKDRIERLLENGLEVWAP 423
CG D+++ +R +RY Q W ++ +TY + + S+ +S D + R + W+
Sbjct: 80 CGHPDVEDHQKSRGKRYAPPQFKWKEKIITYGCKAVGTSTRISLDDLRRTMHQAASQWSE 139
Query: 424 HGNLHFTKLDEGKADIQVYFASGNHGD-GFPFDGPGRVVAHAFPPPLGDIHFDD 582
++ + + + NH FD + +AHAF P G IH +D
Sbjct: 140 LADVEIVESSVKNPMMVISAGRENHYPCTVRFD--TKTLAHAFFPTNGQIHIND 191
>Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical
protein H36L18.1 protein.
Length = 446
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +1
Query: 451 DEGKADIQVYFASGNHGDGFPFDGPGRVVAHAFPPPL-GDIHFDDDETW 594
DE KA+I + FA+G+H DG PFDG G ++AHAF P GD+HFD+DE W
Sbjct: 21 DEQKANIDIVFAAGDHEDGEPFDGKGNILAHAFFPRYGGDVHFDEDELW 69
>AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical
protein H19M22.3a protein.
Length = 519
Score = 68.9 bits (161), Expect = 3e-12
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 30/201 (14%)
Frame = +1
Query: 97 QYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDE 276
+YGYL G+ ++ + Q +A+ Q + QTG +D T + + RC D+ +
Sbjct: 64 KYGYLK----GIDHS-SPQEFRQALMFFQEVLEVEQTGNVDEMTVEAASKPRCTQTDVRQ 118
Query: 277 DSHARNRRYIIQEG--W---NKREVTYRLLNGSSTMSKDRIE--RLLENGLEVWAPHGNL 435
+ R +R+ + + W + + VT + T DR+E +++E ++W+ +
Sbjct: 119 EQTKRTKRFTLSKRAKWAHASGQSVTLKWYISDYTSDIDRLETRKVVEKAFKLWSSQSYI 178
Query: 436 HFTKL---------DEGKADIQVYFASGNHGDGFPFDGPG---------RVVAHAFPP-- 555
K + +ADI + +A GNHGD FDG V+AH F P
Sbjct: 179 KNEKKVTLTFQEASSKDEADINILWAEGNHGDEHDFDGANGKIEGNKKENVLAHTFFPGY 238
Query: 556 --PL-GDIHFDDDETWGVESD 609
PL GDIHFDD E W ++ D
Sbjct: 239 ARPLNGDIHFDDAEDWEIDVD 259
>U00038-1|AAA50663.2| 279|Caenorhabditis elegans Hypothetical
protein T21D11.1 protein.
Length = 279
Score = 68.5 bits (160), Expect = 4e-12
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Frame = +1
Query: 286 ARNRRYIIQ-EGWNKREVTYRLLNGSSTMSKDR--IERLLENGLEVWAPHGNLHFTKLD- 453
+R +RY+I+ + W K +T++L + + D + + W+ ++ F ++
Sbjct: 37 SREKRYVIRAKRWKKHTLTWQLQT-QNLLDPDVFIVRNTMHRAFNEWSTVSSVDFREIPP 95
Query: 454 ----EGKADIQVYFASGNHGDGFPFDGPGRVVAHAFPPPLGDIHFDDDETWGVES 606
+ DI + F G H DGFPFDG VVAHAF P G +HFD +E W + S
Sbjct: 96 DLVTKQPPDIYIAFEKGEHSDGFPFDGQDGVVAHAFYPRDGRLHFDAEEQWSLNS 150
>AF099191-1|AAF78096.1| 279|Caenorhabditis elegans MMP-like protein
protein.
Length = 279
Score = 68.5 bits (160), Expect = 4e-12
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Frame = +1
Query: 286 ARNRRYIIQ-EGWNKREVTYRLLNGSSTMSKDR--IERLLENGLEVWAPHGNLHFTKLD- 453
+R +RY+I+ + W K +T++L + + D + + W+ ++ F ++
Sbjct: 37 SREKRYVIRAKRWKKHTLTWQLQT-QNLLDPDVFIVRNTMHRAFNEWSTVSSVDFREIPP 95
Query: 454 ----EGKADIQVYFASGNHGDGFPFDGPGRVVAHAFPPPLGDIHFDDDETWGVES 606
+ DI + F G H DGFPFDG VVAHAF P G +HFD +E W + S
Sbjct: 96 DLVTKQPPDIYIAFEKGEHSDGFPFDGQDGVVAHAFYPRDGRLHFDAEEQWSLNS 150
>AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical
protein H19M22.3c protein.
Length = 453
Score = 62.9 bits (146), Expect = 2e-10
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 30/166 (18%)
Frame = +1
Query: 202 QTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEG--W---NKREVTYRLLNGSST 366
QTG +D T + + RC D+ ++ R +R+ + + W + + VT + T
Sbjct: 62 QTGNVDEMTVEAASKPRCTQTDVRQEQTKRTKRFTLSKRAKWAHASGQSVTLKWYISDYT 121
Query: 367 MSKDRIE--RLLENGLEVWAPHGNLHFTKL---------DEGKADIQVYFASGNHGDGFP 513
DR+E +++E ++W+ + K + +ADI + +A GNHGD
Sbjct: 122 SDIDRLETRKVVEKAFKLWSSQSYIKNEKKVTLTFQEASSKDEADINILWAEGNHGDEHD 181
Query: 514 FDGPG---------RVVAHAFPP----PL-GDIHFDDDETWGVESD 609
FDG V+AH F P PL GDIHFDD E W ++ D
Sbjct: 182 FDGANGKIEGNKKENVLAHTFFPGYARPLNGDIHFDDAEDWEIDVD 227
>AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 394
Score = 60.1 bits (139), Expect = 1e-09
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 30/166 (18%)
Frame = +1
Query: 202 QTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRY----IIQEGWNK-REVTYRLLNGSST 366
QTG +D T + + RC D+ ++ R +R+ Q G + VT + T
Sbjct: 3 QTGNVDEMTVEAASKPRCTQTDVRQEQTKRTKRFSSLKTSQVGARSGQSVTLKWYISDYT 62
Query: 367 MSKDRIE--RLLENGLEVWAPHGNLHFTKL---------DEGKADIQVYFASGNHGDGFP 513
DR+E +++E ++W+ + K + +ADI + +A GNHGD
Sbjct: 63 SDIDRLETRKVVEKAFKLWSSQSYIKNEKKVTLTFQEASSKDEADINILWAEGNHGDEHD 122
Query: 514 FDGPG---------RVVAHAFPP----PL-GDIHFDDDETWGVESD 609
FDG V+AH F P PL GDIHFDD E W ++ D
Sbjct: 123 FDGANGKIEGNKKENVLAHTFFPGYARPLNGDIHFDDAEDWEIDVD 168
>Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical
protein W09D12.1 protein.
Length = 472
Score = 45.6 bits (103), Expect = 3e-05
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Frame = +1
Query: 73 LDEVN-FLLQYGYLSKDLAGVGYTYTSQS---ISEAVKKMQAFAGLPQTGVLDVPTKQLF 240
+DE +L ++GY+ + T S +A+ + Q+ +G +DVPT+
Sbjct: 34 MDEAKVYLFKFGYMIPEPHQNVKTIQEPSEKQTKDALIRFQSAFLYYSSGDVDVPTQAKM 93
Query: 241 KRKRCGLKDIDEDSHARNRRYIIQEGWNKREVTYRLLNGSSTMSKDRIERLLENGLEVWA 420
RC D+D+ +E W K+ +TY+++N +T+S+ +I E W
Sbjct: 94 NEWRCANNDMDKGQPIPPASK--KELWTKKSLTYKVVNTPNTLSQAQIRSAAHEAFEQWT 151
Query: 421 PHGNLHFTKLDEGKADIQVYF 483
F + DI + F
Sbjct: 152 RASGFKFVETTGATPDITITF 172
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 31.9 bits (69), Expect = 0.38
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +1
Query: 157 ISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEGWNKREV 336
+SE+ + M L T L T + K+ G+K++ +++H R+++ +++E + +
Sbjct: 404 LSESTRMMWDMDELKYTTFLAPKTTEQTKQVEEGVKEVIQEAHERSQKPMLKETFEEATT 463
Query: 337 -TYRLLNGSSTMSKDRIERLLENGLEVWAP 423
T + L G MSKD+ E+ E E + P
Sbjct: 464 STEKPLPGG--MSKDQWEKKKE-AFEAYTP 490
>U41014-3|AAK32948.1| 519|Caenorhabditis elegans Hypothetical
protein C06G1.1 protein.
Length = 519
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 459 QSGHTSLFRFRQPWRRVPLRWPWSSSGPRVSTATRRYT 572
+ G T L FR P+R PL+ P + SG + YT
Sbjct: 259 RQGRTRLNDFRLPYRSPPLQVPTADSGHMIDFYLSNYT 296
>AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform b protein.
Length = 648
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 62 TPLRLTRLIFCYNMDTYRKIWPELATLTRHNLFPKLSRKCRPSQ 193
T +R RL+ N + R +W EL + L KL +C+ Q
Sbjct: 129 TSMRRDRLVGTSNFGSQRSLWCELPEVRAAGLLEKLDDECKLRQ 172
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 62 TPLRLTRLIFCYNMDTYRKIWPELATLTRHNLFPKLSRKCRPSQ 193
T +R RL+ N + R +W EL + L KL +C+ Q
Sbjct: 617 TSMRRDRLVGTSNFGSQRSLWCELPEVRAAGLLEKLDDECKLRQ 660
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,693,070
Number of Sequences: 27780
Number of extensions: 366917
Number of successful extensions: 879
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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