Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1051
         (677 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g09360.1 68418.m01084 laccase family protein / diphenol oxida...    28   4.9  
At5g42620.1 68418.m05188 expressed protein                             28   6.5  
At4g17090.1 68417.m02575 beta-amylase (CT-BMY) / 1,4-alpha-D-glu...    27   8.6  
At1g13110.1 68414.m01520 cytochrome P450 71B7 (CYP71B7) identica...    27   8.6  

>At5g09360.1 68418.m01084 laccase family protein / diphenol oxidase
           family protein similar to laccase [Pinus
           taeda][GI:13661201]
          Length = 569

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +2

Query: 425 KFGTTFIILKYNSS**RMFQ-RRIKSLNYIGINLNNVNFNKVALGLRAVSSRITPIK 592
           +FGT  ++L YNSS   + Q   + + N   I+L+  NF  V  G      R  P++
Sbjct: 441 RFGTKVVVLDYNSSVELILQGTTVWASNIHPIHLHGYNFYVVGSGFGNFDRRKDPLR 497


>At5g42620.1 68418.m05188 expressed protein
          Length = 841

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +1

Query: 43  HHIQKLDILPVESKL*MYSCLHD-IVRVRAR 132
           HH Q++ +  VES +  +SC+HD I+  R R
Sbjct: 41  HHHQRIAVEGVESGVASHSCIHDQIIEQRKR 71


>At4g17090.1 68417.m02575 beta-amylase (CT-BMY) / 1,4-alpha-D-glucan
           maltohydrolase identical to beta-amylase enzyme
           GI:6065749 from [Arabidopsis thaliana]
          Length = 548

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 76  RREGCLTSEYGGFFLHYY 23
           RR+G   SEYG FF+ +Y
Sbjct: 325 RRDGTWNSEYGKFFMEWY 342


>At1g13110.1 68414.m01520 cytochrome P450 71B7 (CYP71B7) identical
           to (SP:Q96514) cytochrome P450 71B7 [Arabidopsis
           thaliana];   PF|00067 Cytochrome P450 family. ESTs
           gb|T44875, gb|T04814, gb|R65111, gb|T44310 and gb|T04541
           come from this gene; identical to cDNA cytochrome P450
           GI:1523795, ATCYP71B7
          Length = 504

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -3

Query: 621 YRYIVEENNYLIGVMRDETALKPNATLLKLTLLRFI 514
           +RYI EE N L+     E+ALK +   LK TL   +
Sbjct: 144 FRYIREEENDLLIKKLTESALKKSPVNLKKTLFTLV 179


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,243,651
Number of Sequences: 28952
Number of extensions: 218120
Number of successful extensions: 401
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)