Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1050
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   4.1  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   9.5  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   9.5  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   9.5  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
 Frame = +1

Query: 76  KQIFPLYNISID*YRFSYNGVLVFFLSKH-------CFLVFLKNTVVFMLLA 210
           K +F   N+ I     SY  VLVF+L          C  + L  T+ F+L++
Sbjct: 251 KTLFYTVNLIIPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLIS 302


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 515 SGAFRYL-KHRSPFSSNPSLETKGSTSKLTH*H 610
           SG F  L  H SP   +P + +  + + LTH H
Sbjct: 466 SGGFSSLHSHHSPHHVSPGMGSTVNGASLTHSH 498


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 339 KCKYYGGQRRNVMIRG*KSTYELRCYLNYC--DYILLNNKRFTLN 211
           K  +YG  + NV+     +TY +  Y N+   +Y+  N +   LN
Sbjct: 188 KFGFYGNGKYNVVYANYTATYPMDYYNNFYTEEYLNYNTEDIGLN 232


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 339 KCKYYGGQRRNVMIRG*KSTYELRCYLNYC--DYILLNNKRFTLN 211
           K  +YG  + NV+     +TY +  Y N+   +Y+  N +   LN
Sbjct: 188 KFGFYGNGKYNVVYANYTATYPMDYYNNFYTEEYLNYNTEDIGLN 232


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,459
Number of Sequences: 2352
Number of extensions: 11148
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)