Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1047
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IJR2 Cluster: Putative uncharacterized protein; n=4; ...    36   1.4  
UniRef50_Q3W6P5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q8MTQ0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q24278 Cluster: Cyclic nucleotide-gated cation channel;...    33   9.5  

>UniRef50_Q8IJR2 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 628

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
 Frame = +3

Query: 270 NTHINISLSIKYMYFLYGYKISSKSDAWF-------SSYNGTSVKTTVDLYISIDFYFFS 428
           N +IN    IKY  F+Y Y+I  K + +F       ++ NG  +    D+YI++D Y+  
Sbjct: 105 NKYINSRQMIKYSGFIYLYEIIEKKNFYFLLHFLMTNNNNGLIIILPEDMYINVDEYYRI 164

Query: 429 KKI 437
            KI
Sbjct: 165 NKI 167


>UniRef50_Q3W6P5 Cluster: Putative uncharacterized protein; n=1;
           Frankia sp. EAN1pec|Rep: Putative uncharacterized
           protein - Frankia sp. EAN1pec
          Length = 338

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 324 IHIENTCT*WIG*YLYECWTPYTSCGGVNDENLCWGE 214
           +H +N CT ++   LY    P T  GG +  N+ WG+
Sbjct: 177 VHFQNDCTNFVSQALYAGGFPMTGYGGSSGNNVWWGD 213


>UniRef50_Q8MTQ0 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 44

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -1

Query: 211 IIMFILNAQQSGRVQLVY 158
           II+ ILNAQ+SGRVQLVY
Sbjct: 10  IIILILNAQRSGRVQLVY 27


>UniRef50_Q24278 Cluster: Cyclic nucleotide-gated cation channel;
           n=6; Diptera|Rep: Cyclic nucleotide-gated cation channel
           - Drosophila melanogaster (Fruit fly)
          Length = 665

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +3

Query: 306 MYFLYGYKISSKSDAWFSSYNGTSVKTTVDLYISIDFYFFSKKIIT 443
           MYF   Y+I   SD+W  + NGT   T    YI   FY+ +  + T
Sbjct: 268 MYFAISYEIGFSSDSWVYNLNGTRNNTLQRQYI-YSFYWSTLTLTT 312


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,807,908
Number of Sequences: 1657284
Number of extensions: 12015156
Number of successful extensions: 22516
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22515
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)