Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1046
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    23   2.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.6  

>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 269 FGSTRKHCLDKPKQVLSLLNRMI 337
           F   +KH   KP Q+L+LL  +I
Sbjct: 34  FRLCKKHKTKKPVQILALLQEII 56


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 269 FGSTRKHCLDKPKQVLSLLNRMI 337
           F   +KH   KP Q+L+LL  +I
Sbjct: 34  FRLCKKHKTKKPVQILALLQEII 56


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 192 FFFLCILFGCMGYFRFSRHIRF 127
           FF LCI +    +  F+ H+ F
Sbjct: 141 FFLLCIYYFYCAFIIFTVHLLF 162


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 54  YLVFKCFFLFRLLI 95
           Y +F C FLF ++I
Sbjct: 666 YWLFHCHFLFHIVI 679


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 126 KNEYVWRT*SSPYTRR 173
           KNE +W+     YTR+
Sbjct: 259 KNEIIWKKLREDYTRQ 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,758
Number of Sequences: 336
Number of extensions: 2934
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)