Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1043
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.8  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   3.7  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   3.7  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   3.7  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.5  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -1

Query: 237 AKRTFSGRSP*DSDGSTAASNAGELLCHLRNSNPAAPQIP 118
           ++R ++GR+  D      A   G    HLR  N  +  IP
Sbjct: 281 SQRRYTGRATCDCPNCQEAERLGPAGVHLRKKNIHSCHIP 320


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 354 RMTRFVHLSDETLTLKLNES 295
           R  RFV + D  LTLKL  +
Sbjct: 6   RKQRFVDIGDSLLTLKLTHA 25


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/55 (21%), Positives = 23/55 (41%)
 Frame = +2

Query: 491 WSSFVDELPLISQISFPRYIFNNNNSEPIQIHGFADASEKGFGACVYIRYKDQED 655
           W S++D++    + + PRY  N  N   I +    +   +G     +  +  Q D
Sbjct: 402 WHSYIDDIFQEYKATLPRYTENQLNYPGITVSNI-EVQSQGSSKNTFNTFWQQSD 455


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -1

Query: 396 DNRPRGSYIFAISDRMTRFVHLSDETLTLKLNESDLGFHCKPRTLIFLS 250
           D +PRGS +F       RF HL ++  T K+  ++ G +      IFL+
Sbjct: 463 DFQPRGS-VFV------RFTHLQNQDFTYKITVNNSGNNRMGTCRIFLA 504


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 555 TIIIPNRYKFTVLLTLPRRVSEHVYIFV 638
           TI  P+  KFT L T P   +  +Y FV
Sbjct: 32  TIYRPDNGKFTALDTDPNLCTHILYAFV 59


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 555 TIIIPNRYKFTVLLTLPRRVSEHVYIFV 638
           TI  P+  KFT L T P   +  +Y FV
Sbjct: 32  TIYRPDNGKFTALDTDPNLCTHILYAFV 59


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/42 (21%), Positives = 19/42 (45%)
 Frame = +2

Query: 458 DETPPVDIVNSWSSFVDELPLISQISFPRYIFNNNNSEPIQI 583
           D T  +D+  +   +  ++          Y F N+NSE +++
Sbjct: 159 DHTEEIDVKTAMKKYSVDIISTCAFGINTYCFRNDNSEILKM 200


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 18  NSRRPFYLTMFSSTMSYLARTLKSAHSLY 104
           ++R+PF+  + S     L    K++ SLY
Sbjct: 203 SARKPFFKLLTSKIYKVLEEKYKTSGSLY 231


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 180  SNAGELLCHLRN 145
            +NAGE  CH+ N
Sbjct: 1369 NNAGEYSCHVEN 1380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,969
Number of Sequences: 336
Number of extensions: 3912
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)