Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1043
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 105 5e-23
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 105 5e-23
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr... 88 8e-18
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 87 2e-17
U64835-1|AAO25997.1| 335|Caenorhabditis elegans Serpentine rece... 30 1.6
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 29 2.9
Z92781-4|CAB82208.1| 319|Caenorhabditis elegans Hypothetical pr... 29 3.8
U39472-8|AAP86618.1| 338|Caenorhabditis elegans Serpentine rece... 29 5.0
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 105 bits (251), Expect = 5e-23
Identities = 61/182 (33%), Positives = 103/182 (56%), Gaps = 4/182 (2%)
Frame = +2
Query: 209 GERPENVLFAEMEIDKKIKVLGLQWNPKSDSFNFK-VKVSSLKCTKRVILSEIAKIYDPL 385
GE + + + D KIK+LG W+ D+F K V+ TKR + S++A +DPL
Sbjct: 1313 GEEMDKISEKDKAKDHKIKMLGYDWDSIGDTFIIKIVRPDEDHPTKREVASKMAATFDPL 1372
Query: 386 GLLSPVTLFAKHLIQLLWIAKVDWDETPPVDIVNSWSSFVDELPLISQISFPRYIFNNNN 565
GL++P+ + K LIQ +W +KV W P ++ +W + E+ +I+ PR + N+ +
Sbjct: 1373 GLVTPIIVHFKLLIQQIWESKVTWKTKIPGKLLTAWKK-IKEMYRDDKITVPRQLTNDYD 1431
Query: 566 SEPIQIHGFADASEKGFGACVYI--RYKDQEDFIQTHLIIAKTRVAPLSVR-LTIPRLEL 736
E + I F+DAS+ + +Y+ +YKD+ IQ L+ +K ++ P + LTIP++EL
Sbjct: 1432 YESVNILVFSDASKDIYATTIYLQYQYKDKPPVIQ--LLTSKNKIKPANCNTLTIPKMEL 1489
Query: 737 TA 742
A
Sbjct: 1490 LA 1491
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 105 bits (251), Expect = 5e-23
Identities = 61/182 (33%), Positives = 103/182 (56%), Gaps = 4/182 (2%)
Frame = +2
Query: 209 GERPENVLFAEMEIDKKIKVLGLQWNPKSDSFNFK-VKVSSLKCTKRVILSEIAKIYDPL 385
GE + + + D KIK+LG W+ D+F K V+ TKR + S++A +DPL
Sbjct: 1313 GEEMDKISEKDKAKDHKIKMLGYDWDSIGDTFIIKIVRPDEDHPTKREVASKMAATFDPL 1372
Query: 386 GLLSPVTLFAKHLIQLLWIAKVDWDETPPVDIVNSWSSFVDELPLISQISFPRYIFNNNN 565
GL++P+ + K LIQ +W +KV W P ++ +W + E+ +I+ PR + N+ +
Sbjct: 1373 GLVTPIIVHFKLLIQQIWESKVTWKTKIPGKLLTAWKK-IKEMYRDDKITVPRQLTNDYD 1431
Query: 566 SEPIQIHGFADASEKGFGACVYI--RYKDQEDFIQTHLIIAKTRVAPLSVR-LTIPRLEL 736
E + I F+DAS+ + +Y+ +YKD+ IQ L+ +K ++ P + LTIP++EL
Sbjct: 1432 YESVNILVFSDASKDIYATTIYLQYQYKDKPPVIQ--LLTSKNKIKPANCNTLTIPKMEL 1489
Query: 737 TA 742
A
Sbjct: 1490 LA 1491
>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical protein
K06C4.15 protein.
Length = 1067
Score = 87.8 bits (208), Expect = 8e-18
Identities = 55/198 (27%), Positives = 103/198 (52%), Gaps = 6/198 (3%)
Frame = +2
Query: 203 SHGERPENVLFAEMEIDKKIKVLGLQWNPKSDSFNFKVKVSSLKC----TKRVILSEIAK 370
+H E E + + D+ IK+LG++WN D+ + +K++ ++ TKR + S++A+
Sbjct: 853 NHDESMEKIDPKDRVSDRTIKLLGMKWNSSPDADTYTIKIADVQTIMHPTKRDVASKMAE 912
Query: 371 IYDPLGLLSPVTLFAKHLIQLLWIAKVDWDETPPVDIVNSWSSFVDELPLISQISFPRYI 550
+DPLGL+SP+ + K IQ +V+W + P +++ W + + + I+ PR +
Sbjct: 913 TFDPLGLISPIQVLMKRFIQK---HEVNWKDPIPKHLLDDWQA-IQASFIDRTITVPRRL 968
Query: 551 FNNNNSEPIQIHGFADASEKGFGACVYIRYKDQEDFIQT-HLIIAKTRVAP-LSVRLTIP 724
+ + IQ+ F+DAS+ + A Y + +D LI +K ++ P TIP
Sbjct: 969 TTDFEYKEIQLLIFSDASQDIYAAAAYAYFSYGDDRPPVISLITSKNKIKPSKETNWTIP 1028
Query: 725 RLELTAAVLLSKLIEKVM 778
+LEL + S L ++
Sbjct: 1029 KLELLGIEIGSNLASSIV 1046
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 86.6 bits (205), Expect = 2e-17
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 3/167 (1%)
Frame = +2
Query: 251 DKKIKVLGLQWNPKSDSFNFKVK-VSSLKCTKRVILSEIAKIYDPLGLLSPVTLFAKHLI 427
+ ++KVLG++W+ K+D + L+ ++R + S IA IYDP+GLL P+ L K
Sbjct: 402 ESEVKVLGVKWSTKTDQITSSTTDIDILENSRRTVSSAIASIYDPMGLLVPLLLPLKLFQ 461
Query: 428 QLLWI--AKVDWDETPPVDIVNSWSSFVDELPLISQISFPRYIFNNNNSEPIQIHGFADA 601
+ LWI K WD + S D + S+ F R+I + + +I FADA
Sbjct: 462 RKLWIEEEKYGWDTPLKEKHEKEYKSITDNIRGFSK-DFNRHIIDKSGEN--EIIAFADA 518
Query: 602 SEKGFGACVYIRYKDQEDFIQTHLIIAKTRVAPLSVRLTIPRLELTA 742
S++ AC+Y++ K +L+ K+ V L + TIP+LE+ A
Sbjct: 519 SQEAIAACIYVKNK-----YGVNLLFGKSNVKSLKEKWTIPKLEVQA 560
>U64835-1|AAO25997.1| 335|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 28 protein.
Length = 335
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 168 RQRYSLRCCHQSLMVSGRRTFSSLK 242
R R S RCC Q++ SGRRT S++
Sbjct: 303 RMRSSFRCCTQTVSSSGRRTNGSVQ 327
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 476 DIVNSWSSFVDELPLISQISFPRYIFNNNNSEPIQIHGFADASEKGFGACVYIRYK 643
++++SW+ + + +S RY+ N PI +H F S AC I Y+
Sbjct: 52 NLISSWTFVNTQETTDTMVSMVRYL-NKCKGSPIVVHDFDGISRSASLACTIIGYQ 106
>Z92781-4|CAB82208.1| 319|Caenorhabditis elegans Hypothetical
protein F09C3.5 protein.
Length = 319
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 482 VNSWSSFVDELPL-ISQISFPRYIFNNNNSEPIQIHGFADASEK---GFGACVYIRYKDQ 649
+NS S P+ I IS RY N N +H FAD +E+ +G + R +
Sbjct: 151 LNSISEIFKGFPIGILNISAERYDSNENTFYSQILHNFADQTEQFAIEYGGIFHNRQQIH 210
Query: 650 EDFIQTHLIIAKTRVAPLSVRL 715
E + + T++AP S+++
Sbjct: 211 ELLARDLHCVVFTKMAPSSLQI 232
>U39472-8|AAP86618.1| 338|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 32 protein.
Length = 338
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 670 VSLNEIFLIFVTNIYTCSETLLGSVSKT 587
VSLN + +FVT+IY S +L ++S T
Sbjct: 247 VSLNSLLQLFVTSIYAISMFVLANMSMT 274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,301,138
Number of Sequences: 27780
Number of extensions: 367671
Number of successful extensions: 1092
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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