Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1040
(689 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 32 0.068
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 30 0.36
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.63
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 29 0.84
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 28 1.1
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 27 1.9
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 2.6
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 27 3.4
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 27 3.4
SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces pombe... 27 3.4
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 4.5
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 26 4.5
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 26 4.5
SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p... 26 5.9
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 26 5.9
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 26 5.9
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 26 5.9
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 5.9
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 25 7.8
SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces ... 25 7.8
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1052
Score = 32.3 bits (70), Expect = 0.068
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Frame = +3
Query: 75 LNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVK----VIVEEIKPSLKSDLEK 242
+ VE ELID+A DI + + VD V+ ++ +E++ + + D+EK
Sbjct: 867 IGFVEKPDKVTELIDEAEENIDISQDISMTETNAVDDEVQAENSILQDEVEETRQDDIEK 926
Query: 243 FEVPDENE-EIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAE 404
E+ D E + L L + E Q+PE ++S +ND T E
Sbjct: 927 DELEDIKEVKEDENLTTLEETIEIPANDIEVQDPEQC----SCMNSTENDNITTE 977
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 29.9 bits (64), Expect = 0.36
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 3/224 (1%)
Frame = +3
Query: 27 RAASIPDKVPEAE--DKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVI 200
++ SIP ++ E D P+N NL S + D K I+NS+ A ++VVD +
Sbjct: 6 QSESIPHEILPKEPFDLPMN---NLKSSPKNKDSE---KRINNSI-AESEQVVDSALS-- 56
Query: 201 VEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHH-EDAEKIVSS 377
+ + D+ ++P +N EI + P T H K+ +
Sbjct: 57 --NPETNANEDIIAPQLPSQNSEI------IEKNSPVNKLNSSTSLTTHQLASLPKLEVT 108
Query: 378 VKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNETLHF 557
++++ AE + +E + + TE + + A + N + Q N T +
Sbjct: 109 DHDNVSEAETVVLNEDEEKETSLVGSVSVTEDLGDSSAIGRTILVNNSVEPQMEN-TANI 167
Query: 558 IKPADTIAAPSVEETQNKASFETIESGLKSLETNFNSGLNQLSE 689
TI +PS++E+ ++ + +ETN NS L + SE
Sbjct: 168 -----TIVSPSLKESDFESEEKATNDNNGLIETNHNSKLEESSE 206
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.1 bits (62), Expect = 0.63
Identities = 47/235 (20%), Positives = 103/235 (43%), Gaps = 11/235 (4%)
Frame = +3
Query: 18 LAARAASIPDKVPEAED--KPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPV 191
+A+ I K E +D L+VV + E L+ + T K +++ + N+ + ++ V
Sbjct: 1027 IASLQTEIEKKRAENDDLQSKLSVVSS-EYENLLLISSQTNKSLED--KTNQLKYIEKNV 1083
Query: 192 KVIVEEIKPSLKSDLEKF-----EVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHED 356
+ +++E K +LE+ ++ +EN +IK L+ LR QH + E
Sbjct: 1084 QKLLDE-KDQRNVELEELTSKYGKLGEENAQIKDELLALRKKSKKQHDLCANFVDDLKEK 1142
Query: 357 AEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFG---AQ 527
++ + + N+ N ++L Q + + ++++++ SL +
Sbjct: 1143 SDAL-EQLTNEKNELIVSLEQSNSNNEALVEERSDLANRLSDMKKSLSDSDNVISVIRSD 1201
Query: 528 IQKLNETLHFI-KPADTIAAPSVEETQNKASFETIESGLKSLETNFNSGLNQLSE 689
+ ++N+ L + K D+++ E Q++ + + LK E +FN L E
Sbjct: 1202 LVRVNDELDTLKKDKDSLSTQYSEVCQDR---DDLLDSLKGCEESFNKYAVSLRE 1253
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 28.7 bits (61), Expect = 0.84
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Frame = +3
Query: 87 ENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVP---- 254
+N E +D +N +++ + +NK E ++ + EE K S+ E +
Sbjct: 78 DNSKKESTNLDDSNMLEEPKHHDNSNK-ESTNLDDLNMSEEPKHHDSSNKESTNLDNSNM 136
Query: 255 DENEEIK-------RPLVDLRNPGPPQHQEHETQNPEHHEDA--EKIVSSVKNDINTAE 404
DE+E K +P D RN GP Q + + + PE H ++ E+ + + ++ N E
Sbjct: 137 DESENQKNFKIEEPKPSGDFRNEGPKQCDDSKIEKPELHVNSKIEEPIHRIDSEHNEPE 195
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 28.3 bits (60), Expect = 1.1
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 30 AASIPDKVPE--AEDKPL--NVVENLSSEQELIDQANTIKDI-DNSLRANKKEVVDIPVK 194
A ++ VPE AED + + V SE + +++ ++D +NS+ +KK +P
Sbjct: 502 AIALQSSVPENKAEDSVVLKSSVPEDKSEDSVPSKSSVLEDKHENSVEIDKKADDSLPSN 561
Query: 195 VIVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPG 305
E PS+ + + + P+ + + P V PG
Sbjct: 562 NKTEGYTPSVVREEKNYSEPNASPSVIPPRVPTPVPG 598
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.5 bits (58), Expect = 1.9
Identities = 35/156 (22%), Positives = 55/156 (35%), Gaps = 5/156 (3%)
Frame = +3
Query: 186 PVKVIVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEH-----H 350
P ++ +PS+++ +EK N + V Q Q ET P
Sbjct: 237 PTNGVIPGAQPSIEASIEKESTSIRNSTVTNDRVVNTTVDVSQSQTVETSGPSKEVPTTQ 296
Query: 351 EDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQI 530
DA + D TA Q FQ + D + K E+ E Q F +N +
Sbjct: 297 PDASAAKPRTEFDFQTA----NQKFQSMKDDLLKG-KNDEEAEEFYKPKQSFFDNISCES 351
Query: 531 QKLNETLHFIKPADTIAAPSVEETQNKASFETIESG 638
++ ++ AD A E + N +F SG
Sbjct: 352 KEKG-----MEAADRRALRDRERSLNMETFGVAGSG 382
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.1 bits (57), Expect = 2.6
Identities = 41/209 (19%), Positives = 87/209 (41%), Gaps = 6/209 (2%)
Frame = +3
Query: 57 EAEDKPLNV-VENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSD 233
+ P NV VE +S E E + + +++ S +K + ++ E K
Sbjct: 935 DTTQNPDNVEVEAISIELERTKEKLRMAELEKS-NIQQKYLASEKTLEMMNETHEQFKHL 993
Query: 234 LEKFEVPDENEEI---KRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAE 404
+E E+ E+I + L+DL +E E+ + E + E V +
Sbjct: 994 VES-EISTREEKITSLRSELLDLNKRVEVLKEEKESSSKELAKQLEDAVRE-----KDSA 1047
Query: 405 IALRQGFQEV-SDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNETLHFIKPADT-I 578
++ ++ ++++ SD + E I + ++ ++ N+ ++I T ++ T
Sbjct: 1048 LSFKKDYEKIRSDADRVITSLKEDIEKERSLMKECHSNYESEIVSHGRTTQKLRDLRTEF 1107
Query: 579 AAPSVEETQNKASFETIESGLKSLETNFN 665
+ + + KA+FE SGL E ++N
Sbjct: 1108 DEVNTKYLKLKANFEQQHSGLSGAEKDWN 1136
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +3
Query: 150 SLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHE 329
SL N +++ ++ E I+ S + E+ ENE + +DLR ++ E
Sbjct: 5 SLSPNVEDLKKKQIRQYKEIIRISKAQSIRIKELQLENERLLSENIDLRTTAINLEEQLE 64
Query: 330 TQNPEHHEDAEKIVS 374
T E+ E+ K+ +
Sbjct: 65 TVQNENEENKTKLAA 79
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 309 PQHQEHETQNPEHHEDAEKIVSSVKNDIN 395
P +++ T++ E HED + V +++D N
Sbjct: 24 PNNKKSRTRSTESHEDRQAKVQKIQSDFN 52
>SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 298 IPGPRSIKSTKHRILNTTKMLKKSFLPSKMTLTQRK 405
+P P S+ HR LN K+ F P + T++K
Sbjct: 224 LPSPVSLSRYMHRSLNWKKLYDIGFAPFPLGSTEKK 259
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +3
Query: 231 DLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSS 377
D E + P + E K P + GP + H+ +H+E E+ + S
Sbjct: 388 DKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHQGPKEKHNERPEQNMQS 436
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 201 VEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIV--S 374
+ +IKP S+ ++F+ ++ + PL+D+ +P H+ N +KI +
Sbjct: 184 MNKIKPKNDSESDRFKRNSQSLSQQSPLLDVHSPDNSNHRTMLNINNSSPIKPKKIFKPN 243
Query: 375 SVKNDIN 395
VKN I+
Sbjct: 244 EVKNRIS 250
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 216 PSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQN 338
PS K E ++ E I + VD+ NPG + ET N
Sbjct: 40 PSSKFQNEPLQLNSEESSIMQRYVDMLNPGATFVNDSETFN 80
>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 723
Score = 25.8 bits (54), Expect = 5.9
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Frame = +3
Query: 48 KVPEAEDKPLNVVENLSSEQELIDQANTIKDI--DN-----SLRANKKEV----VDIPVK 194
++ E D+ L+ ++ +++Q D N +KD+ DN S+ A++ + V+ P+K
Sbjct: 604 RISELNDRELDEIDWQAADQ---DVENALKDLSDDNDFDTGSISASQSQPEALEVNTPIK 660
Query: 195 VIVEEIKPSLKSDLEKFEVPDENEE 269
+ I+PS D EK ++N E
Sbjct: 661 RKADLIQPSYNYDGEKRRKENDNHE 685
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 25.8 bits (54), Expect = 5.9
Identities = 20/89 (22%), Positives = 35/89 (39%)
Frame = +3
Query: 75 LNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVP 254
L N ++Q + NT + + +E P E KP+ E +
Sbjct: 65 LTAAPNTHAQQANLQSGNTSITHETQSTSRGQEATTSPSLSASHE-KPARPQTGEGSDNE 123
Query: 255 DENEEIKRPLVDLRNPGPPQHQEHETQNP 341
DE+E+I + DL + + Q E ++P
Sbjct: 124 DEDEDIDALIEDLYSQDQEEEQVEEEESP 152
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +3
Query: 306 PPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQ 473
PP H ++ TQ HEDA+ S + + I R ++ G + EQ
Sbjct: 609 PPLHLKNTTQTNNAHEDAQSSNLSQNHSLFYERIPQRPSYRIEKQNKGIYEDENEQ 664
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.8 bits (54), Expect = 5.9
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 366 IVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKL-N 542
++SS N + + A G +++ D + EQ+ L + E FG ++Q++
Sbjct: 1 MISSFSNGFWSKDYAT--GVKKLFDCLDNGVEENEQVKNLLKLYKEANEEFGEKLQEITK 58
Query: 543 ETLHFIKPADTIAAPSVEETQNKASFETIES 635
E L KP +T T NKA FE + S
Sbjct: 59 ECLKGKKPENT----EDGATSNKA-FEGLRS 84
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.8 bits (54), Expect = 5.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 465 TEQINELQASLQHFQENFGAQIQKLNETL 551
+ ++N+LQ ++ + F QI+KLN +
Sbjct: 111 SHEVNDLQTDRENLKHQFEDQIEKLNSEI 139
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 411 LRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNETLHFIK 563
+ Q E+ D + K ++IN + + + F+E + KLN+ L +I+
Sbjct: 9 MEQSVPELEDLLEKNIFNRDEINNIIKTRRVFEEKLARRQVKLNDFLSYIQ 59
>SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 199
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 301 PGPRSIKSTKHRILNTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTV 444
P + + K I +K++ + LP+ +T Q K LFVK+ C+ V
Sbjct: 39 PAVNTASALKSVISEESKIIVSN-LPTDVTEAQVKELFVKSIGPCKRV 85
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,378,853
Number of Sequences: 5004
Number of extensions: 46415
Number of successful extensions: 240
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -