Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1040
(689 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 38 0.005
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 34 0.077
At2g46180.1 68415.m05742 intracellular protein transport protein... 34 0.077
At3g61390.2 68416.m06872 U-box domain-containing protein several... 33 0.14
At1g66170.1 68414.m07511 PHD finger family protein (MMD1) contai... 32 0.41
At3g05110.1 68416.m00555 hypothetical protein 31 0.54
At2g30780.1 68415.m03753 pentatricopeptide (PPR) repeat-containi... 31 0.54
At5g65910.1 68418.m08296 BSD domain-containing protein contains ... 31 0.72
At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5) iden... 31 0.72
At5g54670.1 68418.m06807 kinesin-like protein C (KATC) 30 1.3
At5g44610.1 68418.m05466 DREPP plasma membrane polypeptide-relat... 30 1.3
At2g36340.1 68415.m04460 DNA-binding storekeeper protein-related... 30 1.3
At2g28620.1 68415.m03479 kinesin motor protein-related 30 1.3
At1g28210.2 68414.m03463 DNAJ heat shock protein, putative stron... 30 1.3
At1g28210.1 68414.m03462 DNAJ heat shock protein, putative stron... 30 1.3
At2g44070.1 68415.m05481 eukaryotic translation initiation facto... 30 1.7
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 30 1.7
At1g23710.1 68414.m02993 expressed protein 30 1.7
At5g60800.1 68418.m07628 heavy-metal-associated domain-containin... 29 2.2
At5g54050.1 68418.m06722 DC1 domain-containing protein 29 2.2
At5g38640.1 68418.m04673 eukaryotic translation initiation facto... 29 2.2
At5g29624.1 68418.m03640 DC1 domain-containing protein contains ... 29 2.2
At2g36740.1 68415.m04507 YL1 nuclear family protein similar to Y... 29 2.2
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 29 2.9
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 29 2.9
At2g30410.1 68415.m03704 tubulin folding cofactor A (KIESEL) ide... 29 2.9
At1g50750.1 68414.m05707 expressed protein 29 2.9
At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identic... 29 3.8
At3g57390.2 68416.m06389 MADS-box protein (AGL18) agamous-like p... 29 3.8
At3g57390.1 68416.m06388 MADS-box protein (AGL18) agamous-like p... 29 3.8
At1g12380.1 68414.m01431 expressed protein 29 3.8
At5g35604.1 68418.m04242 hypothetical protein 28 5.1
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 28 5.1
At3g04010.1 68416.m00422 glycosyl hydrolase family 17 protein si... 28 5.1
At2g46250.1 68415.m05751 myosin heavy chain-related contains wea... 28 5.1
At1g48970.1 68414.m05489 eukaryotic translation initiation facto... 28 5.1
At5g66150.1 68418.m08333 glycosyl hydrolase family 38 protein si... 28 6.7
At5g13460.1 68418.m01549 calmodulin-binding family protein low s... 28 6.7
At5g01220.1 68418.m00027 UDP-sulfoquinovose:DAG sulfoquinovosylt... 28 6.7
At4g03430.1 68417.m00470 pre-mRNA splicing factor-related simila... 28 6.7
At5g54030.1 68418.m06720 DC1 domain-containing protein contains ... 27 8.9
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 27 8.9
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 27 8.9
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 27 8.9
At3g03680.1 68416.m00371 C2 domain-containing protein contains I... 27 8.9
At1g51070.1 68414.m05741 basic helix-loop-helix (bHLH) family pr... 27 8.9
At1g34480.1 68414.m04285 DC1 domain-containing protein contains ... 27 8.9
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 27 8.9
At1g06230.2 68414.m00659 DNA-binding bromodomain-containing prot... 27 8.9
At1g06230.1 68414.m00658 DNA-binding bromodomain-containing prot... 27 8.9
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 38.3 bits (85), Expect = 0.005
Identities = 43/213 (20%), Positives = 89/213 (41%), Gaps = 11/213 (5%)
Frame = +3
Query: 27 RAASIPDKVPEAEDKPLNVV-ENLSSEQELIDQANT-IKDIDNSLRANKKEVVDIPVKVI 200
+ +IP V E E+ V E E+E+ + + + S+ ++E V + KV+
Sbjct: 26 KEVTIPTPVAEKEEVAAPVSDEKAVPEKEVTPEKEAPAAEAEKSVSVKEEETVVVAEKVV 85
Query: 201 VEEIKPSLKSDLEKF-EVPDE---NEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKI 368
V + K LE+F E+ E E P+ ++ + + E E + +K
Sbjct: 86 VLTAEEVQKKALEEFKELVREALNKREFTAPVTPVKEEKTEEKKTEEETKEEEKTEEKKE 145
Query: 369 VSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASL-----QHFQENFGAQIQ 533
++ + + + A+ +E S ++E+ E +A + +E+ ++
Sbjct: 146 ETTTEVKVEEEKPAVPAAEEEKSSEAAPVETKSEEKPEEKAEVTTEKASSAEEDGTKTVE 205
Query: 534 KLNETLHFIKPADTIAAPSVEETQNKASFETIE 632
+ E++ + P ++ AP V ET A E +E
Sbjct: 206 AIEESIVSVSPPESAVAPVVVETVAVAEAEPVE 238
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 34.3 bits (75), Expect = 0.077
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 1/212 (0%)
Frame = +3
Query: 18 LAARAASIPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKV 197
L + + +K E E + ++VE + + + ++ +K+++ + +++K V D +
Sbjct: 32 LISELGEMKEKYKEKESEHSSLVELHKTHER--ESSSQVKELEAHIESSEKLVADFTQSL 89
Query: 198 IVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSS 377
E + L S + E+ +E +E + + +L + Q E H E+ + S
Sbjct: 90 NNAEEEKKLLSQ-KIAELSNEIQEAQNTMQELMS--------ESGQLKESHSVKERELFS 140
Query: 378 VKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNETLHF 557
++ DI+ EI R S+ + + +Q+++L ASL+ +E A K ET++
Sbjct: 141 LR-DIH--EIHQRDSSTRASELEAQLESSKQQVSDLSASLKAAEEENKAISSKNVETMNK 197
Query: 558 IKPA-DTIAAPSVEETQNKASFETIESGLKSL 650
++ +TI E + K S ES L SL
Sbjct: 198 LEQTQNTIQELMAELGKLKDSHREKESELSSL 229
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 34.3 bits (75), Expect = 0.077
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 99 SEQELIDQANTIKDIDNSLRANKKEVVDIPVKVI-VEEIKPSLKSDLEKFEVPDENEEIK 275
++++ + + +KD+D L ++KKE +I KV+ E I K+ + K E D+N +++
Sbjct: 493 AKEDAMKLSARLKDVDEQLESSKKEKEEITSKVLHAENIAAEWKNRVSKVE--DDNAKVR 550
Query: 276 RPL 284
R L
Sbjct: 551 RVL 553
>At3g61390.2 68416.m06872 U-box domain-containing protein several
hypothetical proteins - Arabidopsis thaliana
Length = 435
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/98 (20%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +3
Query: 198 IVEEIKPSLKSDLEKFE-VPDENEEIKRPLVDLRN-PGPPQHQEHETQNPEHHEDAEKIV 371
++ +++ +E F + +E EE+K L ++ G + +E T N H E + +
Sbjct: 301 VIRKLQEKNNLSMETFRGIREEQEELKIKLREVSKLKGKREEEEASTSN--HREPPQYFI 358
Query: 372 SSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINEL 485
+ +DI GF + I +W+ R + + +
Sbjct: 359 CPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPM 396
>At1g66170.1 68414.m07511 PHD finger family protein (MMD1) contains
Pfam profile: PF00628: PHD-finger
Length = 704
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 502 CCKLAWSSLICSVRAYHFPIPSDTSW 425
C WS+ S R YHF IP DT W
Sbjct: 95 CRCTGWSNHFVSKRKYHFIIPIDTEW 120
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 31.5 bits (68), Expect = 0.54
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 19/157 (12%)
Frame = +3
Query: 87 ENLSSEQELIDQA-NTIKDIDNSLRA--NKKEVVDIPVKVIVEEIKP-SLKS-DLEKFEV 251
E + E ELI+ + ++ +N LR K++ D+ K + E+ K LK +++ +
Sbjct: 53 ERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELEEKEKELELKQRQVQERSI 112
Query: 252 PDENEEIKRPLVDLRNPGPPQHQEHET----------QNPEHHEDAEKIVSSVKNDINTA 401
D PL RN ++ +N E HE +V S ND
Sbjct: 113 QDGPSVDAEPLTQQRNHNDEDKEKDSASVLSASVQIIENDEDHEPVMCVVDSEFNDFRKT 172
Query: 402 EIALRQG----FQEVSDGIGKWYARTEQINELQASLQ 500
+ G + D + + Y R +++N+ Q+SLQ
Sbjct: 173 MSSFMAGQVWALYDGIDSMPRCYGRIKKVNKCQSSLQ 209
>At2g30780.1 68415.m03753 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 452
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 330 TQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYART 467
T P HH D + VS +K+++ T + ++ FQ V D G+W RT
Sbjct: 20 TSLPAHHTDLVQRVSILKDELLTIGNS-KEKFQNVLDQKGQWLFRT 64
>At5g65910.1 68418.m08296 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 432
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +3
Query: 291 LRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGI 446
L P + Q P+H E+ E +++ +KND R G ++S +
Sbjct: 64 LSQPSSSPDLQERNQTPDHPEEDEDLIAGIKNDFAEIGGRFRTGISKLSGNL 115
>At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5)
identical to HAC5 (GI:21105780) [Arabidopsis thaliana];
similar to CREB-binding protein GB:S39162 from [Homo
sapiens]
Length = 1670
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +3
Query: 408 ALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNE 545
+L G Q VS G+G+W++ ++ + + + +E+FG + K +E
Sbjct: 524 SLSAGVQPVS-GLGQWHSSSQNLTPISKNSNEEREHFGVRFHKQHE 568
>At5g54670.1 68418.m06807 kinesin-like protein C (KATC)
Length = 754
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/85 (22%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +3
Query: 48 KVPEAEDKPLNVVENLSSEQ-ELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSL 224
+V + D+ L V+ L +E + D + I +++ + + ++ + +++ E + +
Sbjct: 284 QVKDDRDRHLVEVKTLQTEATKYNDFKDAITELETTCSSQSTQIRQLQDRLVNSERRLQV 343
Query: 225 KSDLEKFEVPDENEEIKRPLVDLRN 299
SDL FE +E E+ K+ ++DL++
Sbjct: 344 -SDLSTFEKMNEYEDQKQSIIDLKS 367
>At5g44610.1 68418.m05466 DREPP plasma membrane polypeptide-related
contains Pfam profile: PF05558 DREPP plasma membrane
polypeptide
Length = 168
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +3
Query: 57 EAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDL 236
E E KP ++ E E++++ + + + V++PV EE KP+++ +
Sbjct: 50 EGETKPEEIIATGEKEIEIVEE-----------KKEEAKPVEVPVLAAAEEKKPAVEEEK 98
Query: 237 EKFEVPDEN---EEIKRPLVDLRNPGPPQHQE 323
+ V ++ EE K+P V+ + P + +E
Sbjct: 99 KTAPVEEKKPAVEEEKKPAVEEKKPVEEEKKE 130
>At2g36340.1 68415.m04460 DNA-binding storekeeper protein-related
contains similarity to storekeeper protein [Solanum
tuberosum] gi|14268476|emb|CAC39398; contains PF04504:
Protein of unknown function, DUF573
Length = 414
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/81 (23%), Positives = 35/81 (43%)
Frame = +3
Query: 27 RAASIPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVE 206
+A +P PE D P ++ E ++AN +IDN +R + D+P
Sbjct: 167 QAKDVPSGEPETNDVPCEEQDDRDVPCEEQERANI--EIDNGVREKLDQAKDVPCVEQES 224
Query: 207 EIKPSLKSDLEKFEVPDENEE 269
E P ++ + E+ + +E
Sbjct: 225 EDVPCVEQERVSIEIDNGEKE 245
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 30.3 bits (65), Expect = 1.3
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 13/209 (6%)
Frame = +3
Query: 102 EQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEE-IKPSLKSDLEKFEVPDENEEIKR 278
E E A+ I+ ++ A K+++D+ E+ + L+ L+K E + E ++
Sbjct: 442 EAEKKAMADKIEQMEVEGEAKDKQIIDLQELYNSEQLVTAGLREKLDKTE--KKLYETEQ 499
Query: 279 PLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTA---EIALRQGFQEVSDGIG 449
L+DL +H++ E ++ S K ++ A + L +VS+
Sbjct: 500 ALLDLEE----KHRQAVATIKEKEYLISNLLKSEKTLVDRAVELQAELANAASDVSNLFA 555
Query: 450 KWYARTEQINELQASL-QHFQENFGAQIQKLNETL--------HFIKPADTIAAPSVEET 602
K R ++I + SL Q FQ Q++ LN ++ ++ + + V
Sbjct: 556 K-IGRKDKIEDSNRSLIQDFQSQLLRQLELLNNSVAGSVSQQEKQLQDMENVMVSFVS-A 613
Query: 603 QNKASFETIESGLKSLETNFNSGLNQLSE 689
+ KA+ ET+ L L+ +N+G+ L +
Sbjct: 614 KTKAT-ETLRGSLAQLKEKYNTGIKSLDD 641
>At1g28210.2 68414.m03463 DNAJ heat shock protein, putative strong
similarity to mitochondrial DnaJ protein (AtJ1)
GI:564030 from [Arabidopsis thaliana]; contains Pfam
profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal
region, PF00684: DnaJ central domain (4 repeats);
identical to cDNA DnaJ homolog AtJ1 (atj) GI:564029
Length = 427
Score = 30.3 bits (65), Expect = 1.3
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Frame = +3
Query: 99 SEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVPD---ENEE 269
S++ L ++ I+NS N +V+ + K EEIK S +KF PD N
Sbjct: 27 SQKPLFERYIHATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFH-PDTNRNNPS 85
Query: 270 IKRPLVDLRNPGPPQHQEHET-QNPEHHEDAEKI----VSSVKNDINTAEIALRQGFQEV 434
KR ++R + +ET N E E+ +K+ V ND +E R
Sbjct: 86 AKRKFQEIR-------EAYETLGNSERREEYDKLQYRNSDYVNNDGGDSERFRRAYQSNF 138
Query: 435 SDGIGKWYARTEQINELQASLQ 500
SD K ++ + N+++ ++
Sbjct: 139 SDTFHKIFSEIFENNQIKPDIR 160
>At1g28210.1 68414.m03462 DNAJ heat shock protein, putative strong
similarity to mitochondrial DnaJ protein (AtJ1)
GI:564030 from [Arabidopsis thaliana]; contains Pfam
profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal
region, PF00684: DnaJ central domain (4 repeats);
identical to cDNA DnaJ homolog AtJ1 (atj) GI:564029
Length = 408
Score = 30.3 bits (65), Expect = 1.3
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Frame = +3
Query: 99 SEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVPD---ENEE 269
S++ L ++ I+NS N +V+ + K EEIK S +KF PD N
Sbjct: 27 SQKPLFERYIHATGINNSSARNYYDVLGVSPKATREEIKKSFHELAKKFH-PDTNRNNPS 85
Query: 270 IKRPLVDLRNPGPPQHQEHET-QNPEHHEDAEKI----VSSVKNDINTAEIALRQGFQEV 434
KR ++R + +ET N E E+ +K+ V ND +E R
Sbjct: 86 AKRKFQEIR-------EAYETLGNSERREEYDKLQYRNSDYVNNDGGDSERFRRAYQSNF 138
Query: 435 SDGIGKWYARTEQINELQASLQ 500
SD K ++ + N+++ ++
Sbjct: 139 SDTFHKIFSEIFENNQIKPDIR 160
>At2g44070.1 68415.m05481 eukaryotic translation initiation factor
2B family protein / eIF-2B family protein similar to
SP|Q63186 Translation initiation factor eIF-2B delta
subunit (eIF-2B GDP-GTP exchange factor) {Rattus
norvegicus}; contains Pfam profile PF01008: Initiation
factor 2 subunit family
Length = 307
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 147 NSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKF 245
N++R K + +P+ + E K SL SD+E+F
Sbjct: 47 NAIRFVKNRIAKLPITLSESEAKASLHSDIERF 79
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.9 bits (64), Expect = 1.7
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +3
Query: 318 QEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ-GFQEVSDGIGKWYARTEQINELQAS 494
QE + E E+ EK+ S V D T+++A Q + V D + ++ E +
Sbjct: 846 QEVQLARVEEQEEIEKVKSEV--DALTSKLAETQTALKLVEDALSTAEDNISRLTEENRN 903
Query: 495 LQHFQENFGAQIQKLNETLHFIKPADTIAAPSVEETQNKASFETIESGLKSLETNFNSGL 674
+Q +EN ++QK + A ++A+ E K+ T+E+ L E N + +
Sbjct: 904 VQAAKENAELELQKA------VADASSVASELDEVLATKS---TLEAALMQAERNISDII 954
Query: 675 NQLSE 689
++ E
Sbjct: 955 SEKEE 959
>At1g23710.1 68414.m02993 expressed protein
Length = 295
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 186 PVKVIVEEIKPSLKSDLEKFEVPDENEEIKR 278
PVK I +E + D K P+E+EEIK+
Sbjct: 10 PVKCIADERLTEISMDFTKLGFPEEDEEIKK 40
>At5g60800.1 68418.m07628 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 283
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 213 KPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDI 392
K ++ L+ ++ ++ EE + VDL +P P + +E E +N ++ ED +K K D
Sbjct: 64 KLTVTGALDPVKLREKLEEKTKKKVDLVSPQPKKEKEKENKN-KNDEDKKKSEEKKKPDN 122
Query: 393 N 395
N
Sbjct: 123 N 123
>At5g54050.1 68418.m06722 DC1 domain-containing protein
Length = 580
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 213 KPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHE 329
K + LE +VP+E EEIK P + G H HE
Sbjct: 265 KKEVWDGLELEDVPEEEEEIKDPFKVINEKGDIVHFSHE 303
>At5g38640.1 68418.m04673 eukaryotic translation initiation factor
2B family protein / eIF-2B family protein similar to
SP|P41111 Translation initiation factor eIF-2B delta
subunit (eIF-2B GDP-GTP exchange factor) {Oryctolagus
cuniculus}; contains Pfam profile PF01008: Initiation
factor 2 subunit family
Length = 642
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 147 NSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKF 245
N++R K + +P+ + E K +L+SD+E+F
Sbjct: 389 NAIRFVKNRIAKLPITLSESEAKATLQSDIERF 421
>At5g29624.1 68418.m03640 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain
Length = 488
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 231 DLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHE 329
DLE +VPDE EEIK P + G H HE
Sbjct: 261 DLE--DVPDEEEEIKDPFKVINENGDIVHISHE 291
>At2g36740.1 68415.m04507 YL1 nuclear family protein similar to YL-1
protein (Transcription factor-like 1)
(Swiss-Prot:Q15906) [Homo sapiens]
Length = 379
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Frame = +3
Query: 147 NSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVPDENEEI---KRPLVDLRNPGPPQH 317
+++ N+KE+ D+P K ++ K + K +K +V + E I ++P +L N +
Sbjct: 89 DAVAVNEKELRDLPKKRLIYPGKTASKKKKKKTKVVSQLEYIPGDEKPGEELGNKEQEEK 148
Query: 318 QEHETQNPEHHEDAEKIVSSVKNDINTAE-IALRQGFQEVSDGI 446
+E+E Q E + + + AE ALR Q + I
Sbjct: 149 EENEAQEDMEGEKVIRKSTRTSVVVRQAERDALRAAIQATTKPI 192
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 29.1 bits (62), Expect = 2.9
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Frame = +3
Query: 381 KNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQH--FQENFGAQIQKLNETLH 554
KNDI+ A + R+ +EV I K + +++ + SLQ +E + K E+
Sbjct: 411 KNDIHAAVESARRELEEVKANIEKAASEVKKLKIIAGSLQSELGRERQDLEETKQKESTG 470
Query: 555 FIKPADTIAAPSVEETQNKASFETIES-GLKSLETNFNSGLNQLSE 689
+ D A + ET K T E+ K+L T L E
Sbjct: 471 LARTNDKDAGEELVETAKKLEQATKEAEDAKALATASRDELRMAKE 516
>At3g54670.1 68416.m06049 structural maintenance of chromosomes (SMC)
family protein similar to SMC1 protein [Bos taurus]
GI:4235253, 14S cohesin SMC1 subunit (SMC protein)
[Xenopus laevis] GI:3328231; contains Pfam profiles
PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 29.1 bits (62), Expect = 2.9
Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 7/124 (5%)
Frame = +3
Query: 36 SIPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDID------NSLRANKKEVVDIPVKV 197
SI DK+P+ E + N++E + + + +A ++D N L E+VD K
Sbjct: 746 SIKDKLPQLEQEERNIIEEIDRIKPELSKAIARTEVDKRKTEMNKLEKRMNEIVDRIYKD 805
Query: 198 IVEEI-KPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVS 374
+ + P+++ E+ ++ +E + L ++Q QN + KI S
Sbjct: 806 FSQSVGVPNIRV-YEETQLKTAEKEAEERLELSNQLAKLKYQLEYEQNRDVGSRIRKIES 864
Query: 375 SVKN 386
S+ +
Sbjct: 865 SISS 868
>At2g30410.1 68415.m03704 tubulin folding cofactor A (KIESEL)
identical to cDNA tubulin folding cofactor A,
GI:20514256, SP|O04350 Tubulin-specific chaperone A
(Tubulin-folding cofactor A) (CFA) (TCP1-chaperonin
cofactor A homolog) {Arabidopsis thaliana}
Length = 113
Score = 29.1 bits (62), Expect = 2.9
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Frame = +3
Query: 120 QANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFE---------VPDENEEI 272
+ +T K I L + +KEV K + K + DL++ E +PD ++ +
Sbjct: 10 KTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRMMIPDCHKRL 69
Query: 273 KRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAE 404
+ L DL++ + E + PE EDA+K V+ V+ T +
Sbjct: 70 ESALADLKSTLAELEETDEKEGPE-IEDAKKTVADVEKQFPTED 112
>At1g50750.1 68414.m05707 expressed protein
Length = 816
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = +3
Query: 258 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSV--KNDINTAEIALRQGFQE 431
E E++ + N P HQ+H T+ E + S V D + +IA+ +G Q
Sbjct: 670 EKEDVVADDDTMNNIEPVPHQQHATRGTNRDETSRACKSVVLSPTDESNIQIAVGEGSQG 729
Query: 432 VSDGI---GKWYARTEQINELQASLQHFQENFG 521
G+ G T + NE L+ + +FG
Sbjct: 730 QDCGLQDNGLGSDETSKSNEQLEDLEKRKNDFG 762
>At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 486
Score = 28.7 bits (61), Expect = 3.8
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = +3
Query: 72 PLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDI-PVKVIVEEIKPSLKSDLEKFE 248
PL + +++ + QA ID+ N KE P KV VE+ + D
Sbjct: 155 PLPDMSHVAGKNRKELQAMAKGRIDDKKEQNMKEEYPFSPPKVKVEDTQKESFVDRSFGG 214
Query: 249 VPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVK 383
+ + LV+L N +Q+ E +PE+ DAE++++ ++
Sbjct: 215 KKPVSTSVNNSLVELSN----YNQKREEFDPEYDNDAEQLLAEME 255
>At3g57390.2 68416.m06389 MADS-box protein (AGL18) agamous-like
protein 15 - Arabidopsis thaliana, PIR:S71200
Length = 195
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = +3
Query: 93 LSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKF------EVP 254
+S E +L + +++KD + N+ E I K +EE L+ +E +V
Sbjct: 71 ISLENQLNESLHSVKDQKTQILLNQIERSRIQEKKALEE-NQILRKQVEMLGRGSGPKVL 129
Query: 255 DENEEIKRPLVDLRNPGPPQHQEHETQNPEHHED 356
+E + P D P +E E N EHH D
Sbjct: 130 NERPQDSSPEAD---PESSSSEEDENDNEEHHSD 160
>At3g57390.1 68416.m06388 MADS-box protein (AGL18) agamous-like
protein 15 - Arabidopsis thaliana, PIR:S71200
Length = 256
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = +3
Query: 93 LSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKF------EVP 254
+S E +L + +++KD + N+ E I K +EE L+ +E +V
Sbjct: 132 ISLENQLNESLHSVKDQKTQILLNQIERSRIQEKKALEE-NQILRKQVEMLGRGSGPKVL 190
Query: 255 DENEEIKRPLVDLRNPGPPQHQEHETQNPEHHED 356
+E + P D P +E E N EHH D
Sbjct: 191 NERPQDSSPEAD---PESSSSEEDENDNEEHHSD 221
>At1g12380.1 68414.m01431 expressed protein
Length = 793
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 279 PLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWY 458
PL +R+ + +PE +D +K+++ + + + A IAL + + ++G+ Y
Sbjct: 609 PLYLIRDSSGKYLPPFKCLSPEQEKDVDKLITRLVSR-DEAHIALMELMKWRTEGLDPMY 667
Query: 459 ARTEQINE 482
AR Q+ E
Sbjct: 668 ARAVQMKE 675
>At5g35604.1 68418.m04242 hypothetical protein
Length = 298
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 16 CSPHAQPPSRTRSPRPKI 69
CSP PPSRT P P +
Sbjct: 92 CSPRLSPPSRTMGPPPPV 109
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 39 IPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKK 170
I + E + P +V ENL + ID ++KD+ +L KK
Sbjct: 405 IESLLKETKIAPADVAENLMKKNTEIDADGSLKDLIQALEGKKK 448
>At3g04010.1 68416.m00422 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GB:S12402 [Nicotiana sp],
GB:CAA03908 [Citrus sinensis], GB:S44364 [Lycopersicon
esculentum]
Length = 491
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 506 EMLQAGLELVNLLGTS-VPFSNTV*HFLEALTKSDFRCVNVIFDGRN 369
+++Q ++VN L + PF+ + FL SDF FDG+N
Sbjct: 189 DIIQEMTQIVNFLAQNKAPFTVNIYPFLSLYLSSDFPFEYAFFDGQN 235
>At2g46250.1 68415.m05751 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, muscle
(Swiss-Prot:P05661) [Drosophila melanogaster]
Length = 468
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +3
Query: 147 NSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVPDENEEIKRPL-VDLRNPGPPQHQE 323
+ LRA + V + +V ++E++ L+ + + + L + + + G H E
Sbjct: 350 SGLRAKPDDSVSMHQRVCLKELEEGLEKRTRRDNKLQLKKSSGQVLNLSMSSEGDKIHPE 409
Query: 324 HETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 419
+N + HE EK + KN + +R+
Sbjct: 410 SSPRNVDDHESQEKSRTFSKNHPRNVNVMIRE 441
>At1g48970.1 68414.m05489 eukaryotic translation initiation factor
2B family protein / eIF-2B family protein similar to
guanine nucleotide exchange factor, eIF-2B, delta
subunit [Mus musculus] GI:529428; contains Pfam profile
PF01008: Initiation factor 2 subunit family
Length = 756
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 15 VLAARAASIPD-KVPEAEDKPLNVVENLSSEQELIDQANTIK-DIDNSLRANKKEVVDIP 188
+L A +I D P +D +++ ++ + + + + N++R K ++ +P
Sbjct: 451 MLQAFQEAIEDYSTPPMKDLTMDLTAKINGYVSFLIECRPLSMSMGNAIRFLKNQIRKLP 510
Query: 189 VKVIVEEIKPSLKSDLEKF 245
V + E K SL SD+ +F
Sbjct: 511 VNLSESEAKSSLCSDIGRF 529
>At5g66150.1 68418.m08333 glycosyl hydrolase family 38 protein
similar to lysosomal alpha-mannosidase SP:O09159 from
[Mus musculus]
Length = 1047
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 75 LNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVP 254
+N+ S+E+ L Q + I NSL N+ E++ IPV ++ S + L+ +P
Sbjct: 479 MNISYCPSTEETLPGQKSLILVAYNSLGWNRTEIIRIPVNDAGLSVEDSSGNTLDAQYIP 538
Query: 255 DEN 263
+N
Sbjct: 539 MDN 541
>At5g13460.1 68418.m01549 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 443
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +3
Query: 159 ANKKEVVDIPVKVIVEEIKPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQN 338
A KK + + ++ + E+ K K+ IK+ L + PP EH T +
Sbjct: 2 AKKKGLFTVLKRIFISEVNSEKKEKRRKWTF--WKLRIKKRLPSIT--APP---EHRTSH 54
Query: 339 PEHHEDAEKIVSSV 380
H E E+IVS V
Sbjct: 55 ESHEEQKEEIVSDV 68
>At5g01220.1 68418.m00027 UDP-sulfoquinovose:DAG
sulfoquinovosyltransferase / sulfolipid synthase (SQD2)
identical to GI:20302857
Length = 510
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 15 VLAARAASIPDKVPEAEDKPLNVVENLSSEQELIDQANTI 134
V+AARA IPD +PE ++ + N ++ + + T+
Sbjct: 403 VVAARAGGIPDIIPEDQEGKTGFLFNPGDVEDCVTKLRTL 442
>At4g03430.1 68417.m00470 pre-mRNA splicing factor-related similar
to pre-mRNA splicing factor pre-mRNA splicing factor
prp1 (SP:Q12381) [Fission yeast]
Length = 1029
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +3
Query: 372 SSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASL 497
+ +++D+ LR+G + + D + W A E NE A +
Sbjct: 458 AKLEHDVENKSRVLRKGLEHIPDSVRLWKAVVELANEEDARI 499
>At5g54030.1 68418.m06720 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 419
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 234 LEKFEVPDENEEIKRPLVDLRNPGPPQHQEHE 329
LE +VP+E EEI+ P + + G H HE
Sbjct: 250 LELEDVPEEEEEIEDPFKVINDKGDIIHFSHE 281
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 234 LEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIAL 413
+++ E+ + ++ K+ L+DLRN E E+ EKI + + ++I TA L
Sbjct: 560 VKEAELNAQKDQEKKQLIDLRNSADTTIYSVEKSLSEYR---EKIPAEIASEIETAVSDL 616
Query: 414 RQGF--QEVSDGIGKWYARTEQINEL 485
R ++V D K A + ++++
Sbjct: 617 RTAMAGEDVEDIKAKVEAANKAVSKI 642
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 27.5 bits (58), Expect = 8.9
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Frame = +3
Query: 15 VLAARAASIPDKVPEAEDKPLNV---VENLSSEQELIDQANTIKDIDNSLRANKKEVVDI 185
VL+ R A K +DK +V V N + + D+ + N + + +KE+ D
Sbjct: 256 VLSVREALNAKKEAAQKDKSFSVSDTVGNSDDDDDGEDETKFDAKMRNQVLSRRKEIGDT 315
Query: 186 PVKVIVEEIKPSLKSDLEKFE----VPDENEEIKRPLVDLRNPG 305
P K ++ SLK E + V E+E+ + + L+ G
Sbjct: 316 PSKPTQKKKSSSLKGREESTQRSDAVSSEDEKPRMEKLSLKKKG 359
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 27.5 bits (58), Expect = 8.9
Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Frame = +3
Query: 102 EQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLEKFE--VPDENEEIK 275
E+ ++D+ I + +K+ +++ + + IK K+ +E + EN+ +
Sbjct: 481 EKTVLDEKERFTQIQWDMEELRKQCMEM--ESFLNSIKDE-KTHIETANESLVQENQMLL 537
Query: 276 RPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKW 455
+ + D+R H+EHE + + + +V VK+ + T + LR QE+S GI K
Sbjct: 538 QQINDIRENFENFHKEHEELEVKAKAELKVLVKEVKS-LRTTQSDLR---QELS-GIMKE 592
Query: 456 YARTEQINELQASLQHFQEN 515
E+I + + + +N
Sbjct: 593 KLEMERIVQREKDREETAKN 612
>At3g03680.1 68416.m00371 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1017
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/99 (25%), Positives = 40/99 (40%)
Frame = +3
Query: 42 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPS 221
P+ E+KP + + ++E + A T + +KKE + +E KP
Sbjct: 148 PEAAAATEEKPPEIAKAEDGKKET-EAAKT----EEKKEGDKKEEEKPKEEAKPDEKKPD 202
Query: 222 LKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQN 338
D K + PD P +++NP PQ E QN
Sbjct: 203 APPDT-KAKKPDTAVAPPPPPAEVKNPPIPQKAETVKQN 240
>At1g51070.1 68414.m05741 basic helix-loop-helix (bHLH) family
protein similar to bHLH transcription factor GI:3757520
from [Arabidopsis thaliana]
Length = 226
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +3
Query: 42 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPS 221
P + P+ DK + + + + D+A +KD+++SL+ KE+ D K + + K
Sbjct: 95 PGRTPKT-DKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKD--EKNELRDEKQK 151
Query: 222 LKSDLEKFE 248
LK + E+ +
Sbjct: 152 LKVEKERID 160
>At1g34480.1 68414.m04285 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 602
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 659 ICL*RLETRFDCFKRSFILRF 597
IC R +TRFDC K F+L F
Sbjct: 445 ICKVRSQTRFDCGKCDFVLCF 465
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 27.5 bits (58), Expect = 8.9
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 3/137 (2%)
Frame = +3
Query: 42 PDKVPEAEDKPLNVVENLSS--EQELIDQANT-IKDIDNSLRANKKEVVDIPVKVIVEEI 212
PDK K V + + E++ +Q + KD ++SL+ K+ + P ++ +
Sbjct: 722 PDKTRGRTGKKQKVTQAMHRKIEKDCDEQEDLETKDEEDSLKLGKESDAE-PDRMEDHQE 780
Query: 213 KPSLKSDLEKFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDI 392
P ++E +E E K P + + G + E ET E H+ ++ + K+D
Sbjct: 781 LPE-NHNVETKTDGEEQEAAKEPTAESKTNGEEPNAEPETDGKE-HKSLKEPNAEPKSDG 838
Query: 393 NTAEIALRQGFQEVSDG 443
E A + +DG
Sbjct: 839 EEQEAAKEPNAELKTDG 855
>At1g06230.2 68414.m00659 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 766
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/116 (16%), Positives = 47/116 (40%)
Frame = +3
Query: 60 AEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLE 239
A +KP ++EN + ++ + ++ + K + + + K ++ E
Sbjct: 43 AIEKPEGLLENENDNNDVSPAETLAPEFEDPIVVVKNSIEEAALGTNSHGDKNLTEAPSE 102
Query: 240 KFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEI 407
D ++ I +PLV+ + PQ + + E+ + ++D+NT +
Sbjct: 103 NLPGDDSDKVIDKPLVEAFSQAQPQ-DDASLAAMDKSEEVPSQIPKAQDDVNTVVV 157
>At1g06230.1 68414.m00658 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 766
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/116 (16%), Positives = 47/116 (40%)
Frame = +3
Query: 60 AEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLE 239
A +KP ++EN + ++ + ++ + K + + + K ++ E
Sbjct: 43 AIEKPEGLLENENDNNDVSPAETLAPEFEDPIVVVKNSIEEAALGTNSHGDKNLTEAPSE 102
Query: 240 KFEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEI 407
D ++ I +PLV+ + PQ + + E+ + ++D+NT +
Sbjct: 103 NLPGDDSDKVIDKPLVEAFSQAQPQ-DDASLAAMDKSEEVPSQIPKAQDDVNTVVV 157
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,413,034
Number of Sequences: 28952
Number of extensions: 240930
Number of successful extensions: 1180
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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