Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1039
         (331 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   1.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   5.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   5.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    20   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 134 YCALIIPQIHFLTQFFALFY 193
           YC  II  +HFL   +  +Y
Sbjct: 86  YCPFIIFTVHFLLCTYYFYY 105



 Score = 21.4 bits (43), Expect = 2.5
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 134 YCALIIPQIHFLTQFFALFYYLLRWMNELTAHLV 235
           YCA II  +H L  F    Y+        T HL+
Sbjct: 150 YCAFIIFTVHLL--FLLCIYHFFCAFIIFTMHLL 181


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 134 YCALIIPQIHFLTQFFAL 187
           +C L +  +HFLT   +L
Sbjct: 174 FCVLYVVLLHFLTYNLSL 191


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 134 YCALIIPQIHFLTQFFAL 187
           +C L +  +HFLT   +L
Sbjct: 174 FCVLYVVLLHFLTYNLSL 191


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 3   TIYFTWVDHGVTFHTIISSLINNRTIVITSL 95
           T+Y    ++   + T +  LI N  IVI  L
Sbjct: 235 TLYIILTNNQAKYCTTLIGLIKNCVIVIFEL 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,536
Number of Sequences: 336
Number of extensions: 1449
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)