Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1039
(331 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 24 0.41
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 1.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 3.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 5.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 5.1
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 5.1
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 5.1
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 5.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 20 8.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 20 8.9
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 20 8.9
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 20 8.9
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 20 8.9
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 24.2 bits (50), Expect = 0.41
Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 113 NSILTTNYCALIIPQIHFLTQFFALFYY-LLRWMNELTAHLVLMATGVHRHP 265
N+IL + C+L + HF ++ ++R + + A +V+++ G +P
Sbjct: 280 NNILAASACSLFVVIFHFAHPREEFNHWTVMRCVQAMIAGIVVISAGADAYP 331
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.2 bits (45), Expect = 1.7
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 303 RAPPRGGWRHVRCGCLWTP 247
+ P GWR +R WTP
Sbjct: 212 KIPKSSGWRKLRNIVHWTP 230
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 3.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 254 HRHPQRTCRHPPRGGA 301
H P R C PPR G+
Sbjct: 1694 HCAPNRRCPPPPRMGS 1709
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 197 LLRWMNELTAHLVLMATGVHR--HPQRTCR 280
+L NE+T H ++A + + + +TC+
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCK 208
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 197 LLRWMNELTAHLVLMATGVHR--HPQRTCR 280
+L NE+T H ++A + + + +TC+
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCK 208
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 197 LLRWMNELTAHLVLMATGVHR--HPQRTCR 280
+L NE+T H ++A + + + +TC+
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCK 208
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 197 LLRWMNELTAHLVLMATGVHR--HPQRTCR 280
+L NE+T H ++A + + + +TC+
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCK 208
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 197 LLRWMNELTAHLVLMATGVHR--HPQRTCR 280
+L NE+T H ++A + + + +TC+
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCK 208
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 197 LLRWMNELTAHLVLMATGVHR--HPQRTCR 280
+L NE+T H ++A + + + +TC+
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCK 208
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 197 LLRWMNELTAHLVLMATGVHR--HPQRTCR 280
+L NE+T H ++A + + + +TC+
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCK 208
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 197 LLRWMNELTAHLVLMATGVHR--HPQRTCR 280
+L NE+T H ++A + + + +TC+
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCK 208
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 5 NLLHLGRSWGNIP 43
+LLHL SW N P
Sbjct: 666 DLLHLFGSWSNRP 678
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 5 NLLHLGRSWGNIP 43
+LLHL SW N P
Sbjct: 666 DLLHLFGSWSNRP 678
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 5 NLLHLGRSWGNIP 43
+LLHL SW N P
Sbjct: 666 DLLHLFGSWSNRP 678
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.8 bits (39), Expect = 8.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 45 YGMLPHDLPK*SKL 4
YGM P D+ K S++
Sbjct: 397 YGMTPSDIDKYSRI 410
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.8 bits (39), Expect = 8.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 45 YGMLPHDLPK*SKL 4
YGM P D+ K S++
Sbjct: 397 YGMTPSDIDKYSRI 410
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 19.8 bits (39), Expect = 8.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -2
Query: 285 GWRHVRCGCLWTP 247
GWR +R WTP
Sbjct: 133 GWRKLRNIVHWTP 145
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 19.8 bits (39), Expect = 8.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -2
Query: 285 GWRHVRCGCLWTP 247
GWR +R WTP
Sbjct: 452 GWRKLRNIVHWTP 464
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 19.8 bits (39), Expect = 8.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 45 YGMLPHDLPK*SKL 4
YGM P D+ K S++
Sbjct: 335 YGMTPSDIDKYSRI 348
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,753
Number of Sequences: 438
Number of extensions: 1959
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7342137
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -