Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1032
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.6  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   4.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.9  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 342 FFKVFKMMIQRYRDL 298
           FF V KM++ RYR+L
Sbjct: 165 FFVVVKMLLVRYRNL 179


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 342 FFKVFKMMIQRYRDL 298
           FF V KM++ RYR+L
Sbjct: 165 FFVVVKMLLVRYRNL 179


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 396 YGGIAIGGNQPRNIRKLDFFKVFKMMIQRY 307
           Y GI I    P N  K +F K+ + M Q +
Sbjct: 138 YDGIDIDWEYPANADKENFVKLLQEMKQAF 167


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 393 GGIAIGGNQPRNIRKLD 343
           GG+   G +P N++K D
Sbjct: 68  GGVQQAGKKPENVKKED 84


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 540 CVLVATPLTASDLSLWFNYGLFSYRFNRTSSPNDRGFRNVLD 665
           CV     +T + +S+     L +  FN++SS  + G    LD
Sbjct: 283 CVQQLLRITVAFISIVTALFLVAINFNKSSSEENEGKTTQLD 324


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 540 CVLVATPLTASDLSLWFNYGLFSYRFNRTSSPNDRGFRNVLD 665
           CV     +T + +S+     L +  FN++SS  + G    LD
Sbjct: 283 CVQQLLRITVAFISIVTALFLVAINFNKSSSEENEGKTTQLD 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,769
Number of Sequences: 336
Number of extensions: 3731
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)