Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1032
         (740 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001702-1|AAN71457.1|  674|Drosophila melanogaster RE63596p pro...    30   3.8  
AY119043-1|AAM50903.1|  489|Drosophila melanogaster LP06502p pro...    30   3.8  
AE013599-3060|AAM68397.1|  650|Drosophila melanogaster CG9025-PB...    30   3.8  
AE013599-3059|AAF57431.2|  702|Drosophila melanogaster CG9025-PA...    30   3.8  

>BT001702-1|AAN71457.1|  674|Drosophila melanogaster RE63596p
           protein.
          Length = 674

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 2   NDCPALWTDRNKQSCGT 52
           N CP+LW D+N Q+C T
Sbjct: 460 NACPSLWQDQNNQNCIT 476


>AY119043-1|AAM50903.1|  489|Drosophila melanogaster LP06502p
           protein.
          Length = 489

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 2   NDCPALWTDRNKQSCGT 52
           N CP+LW D+N Q+C T
Sbjct: 275 NACPSLWQDQNNQNCIT 291


>AE013599-3060|AAM68397.1|  650|Drosophila melanogaster CG9025-PB,
           isoform B protein.
          Length = 650

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 2   NDCPALWTDRNKQSCGT 52
           N CP+LW D+N Q+C T
Sbjct: 436 NACPSLWQDQNNQNCIT 452


>AE013599-3059|AAF57431.2|  702|Drosophila melanogaster CG9025-PA,
           isoform A protein.
          Length = 702

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 2   NDCPALWTDRNKQSCGT 52
           N CP+LW D+N Q+C T
Sbjct: 488 NACPSLWQDQNNQNCIT 504


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,985,307
Number of Sequences: 53049
Number of extensions: 676684
Number of successful extensions: 1334
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)