Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1032
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p...    29   3.5  
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ...    29   3.5  
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ...    29   3.5  
AC006680-2|AAK72302.1|  309|Caenorhabditis elegans Serpentine re...    28   6.0  
Z73102-15|CAA97416.1|  401|Caenorhabditis elegans Hypothetical p...    28   8.0  
AL032630-1|CAA21558.1|  366|Caenorhabditis elegans Hypothetical ...    28   8.0  
AC006663-5|AAY43999.1|  490|Caenorhabditis elegans Hypothetical ...    28   8.0  

>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical
           protein T25E12.4a protein.
          Length = 1101

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +3

Query: 84  SVNVVKALIDNGDLTDFTLLRVVFQSC 164
           S+N+++ +  + D+TD TL+ VV  SC
Sbjct: 285 SINILQLITTSSDVTDGTLVEVVIGSC 311


>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
           protein T25E12.4a protein.
          Length = 1101

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +3

Query: 84  SVNVVKALIDNGDLTDFTLLRVVFQSC 164
           S+N+++ +  + D+TD TL+ VV  SC
Sbjct: 285 SINILQLITTSSDVTDGTLVEVVIGSC 311


>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
           protein T25E12.4a protein.
          Length = 1101

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +3

Query: 84  SVNVVKALIDNGDLTDFTLLRVVFQSC 164
           S+N+++ +  + D+TD TL+ VV  SC
Sbjct: 285 SINILQLITTSSDVTDGTLVEVVIGSC 311


>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
           protein T25E12.4a protein.
          Length = 1101

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +3

Query: 84  SVNVVKALIDNGDLTDFTLLRVVFQSC 164
           S+N+++ +  + D+TD TL+ VV  SC
Sbjct: 285 SINILQLITTSSDVTDGTLVEVVIGSC 311


>AC006680-2|AAK72302.1|  309|Caenorhabditis elegans Serpentine
           receptor, class x protein9 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 10/58 (17%)
 Frame = +2

Query: 134 HITPCCLSVVLVNVNTNDITRYN--HSHVRLHYTVF--------IYKFVGVFIKIRHS 277
           ++ PCC+ V+   V   ++   N  HS+    + V+        I+ ++GVFI IR+S
Sbjct: 145 YLFPCCVFVIDYTVMALELVTINGVHSYTNSMFLVYDSICTSISIFCYIGVFISIRNS 202


>Z73102-15|CAA97416.1|  401|Caenorhabditis elegans Hypothetical
           protein B0035.14 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = -1

Query: 548 KDAQTRPLDVRRRAGRTPECSQDVLG---NCLYRIRFCRDKY 432
           K+ +T P   +R A RTP+   D        + RIR C+D Y
Sbjct: 98  KNGKTEPEPKQRSASRTPKLGVDYTSEQKELVERIRHCKDYY 139


>AL032630-1|CAA21558.1|  366|Caenorhabditis elegans Hypothetical
           protein Y62H9A.1 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 507 GPAANVEWPCLCVLVATPLTASDL-SLWFNYGLFSYRFNRTSS 632
           GP        +C  +A   + S L S WFNY    YR +R SS
Sbjct: 99  GPFVTAHLFNICCTLAILCSMSFLYSFWFNYFTICYRISRQSS 141


>AC006663-5|AAY43999.1|  490|Caenorhabditis elegans Hypothetical
           protein H24K24.2 protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 24  RTEINRVVVPTRAGSQGAVPSVNVVKALIDNGDLTDFTLLRVVFQSC 164
           RT+INR    T   S  ++  V+ +   I    L DFT L+    +C
Sbjct: 235 RTDINREFAKTLLSSHPSIVHVSAIGCAIFRQSLIDFTNLKNELATC 281


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,972,450
Number of Sequences: 27780
Number of extensions: 354403
Number of successful extensions: 739
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)