Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1031
(768 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 42 3e-04
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 38 0.007
At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /... 36 0.022
At4g29060.1 68417.m04157 elongation factor Ts family protein sim... 36 0.030
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 34 0.091
At1g34590.1 68414.m04299 hypothetical protein 33 0.21
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 33 0.28
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 32 0.37
At5g26200.1 68418.m03118 mitochondrial substrate carrier family ... 32 0.48
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 32 0.48
At4g26630.1 68417.m03837 expressed protein 32 0.48
At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide famil... 32 0.48
At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide famil... 32 0.48
At3g49990.1 68416.m05466 expressed protein 31 0.64
At1g12080.2 68414.m01397 expressed protein 31 0.64
At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to ... 31 0.64
At5g63550.1 68418.m07976 expressed protein 31 1.1
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 30 1.5
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 29 2.6
At1g12080.1 68414.m01396 expressed protein 29 2.6
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 29 3.4
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 29 3.4
At3g01700.1 68416.m00103 arabinogalactan-protein (AGP11) identic... 29 4.5
At2g45800.1 68415.m05696 LIM domain-containing protein similar t... 29 4.5
At2g22795.1 68415.m02704 expressed protein 29 4.5
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 29 4.5
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 4.5
At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containi... 28 6.0
At5g24590.2 68418.m02905 turnip crinkle virus-interacting protei... 28 7.9
At2g02170.1 68415.m00153 remorin family protein contains Pfam do... 28 7.9
At1g23540.1 68414.m02960 protein kinase family protein contains ... 28 7.9
At1g04810.1 68414.m00477 26S proteasome regulatory subunit, puta... 28 7.9
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/117 (23%), Positives = 58/117 (49%)
Frame = +1
Query: 409 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 588
P A AK+ +K ++ ++ +DS +E + +K KP+A D+ S D + + +
Sbjct: 141 PAAAAKNGSVKAKKESSSEDDSSSEDEPAKKPAAKIAKPAAKDSSSSDDDS----DEDSE 196
Query: 589 IDLAPNVESDAAAVPEIKTSEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSA 759
+ ++ AA +S+++D +D +++KPA D ++ S+D+S+
Sbjct: 197 DEKPATKKAAPAAAKAASSSDSSDED--SDEESEDEKPAQKKADTKASKKSSSDESS 251
Score = 28.3 bits (60), Expect = 6.0
Identities = 27/123 (21%), Positives = 50/123 (40%)
Frame = +1
Query: 301 AKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAAQPEDSKT 480
+ DD + EDS+ + S D++ +S D E+PA + D+K
Sbjct: 185 SSSDDDSDEDSEDEKPATKKAAPAAAKAASSSDSSDEDSDEESED---EKPAQKKADTKA 241
Query: 481 EVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTSEAAD 660
+++ E S+ E+ + D E + + MV + E +A P+ ++ AA
Sbjct: 242 SKKSSSDESSESEEDESEDEEETPKKKSSDVEMV-------DAEKSSAKQPKTPSTPAAG 294
Query: 661 APK 669
K
Sbjct: 295 GSK 297
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 37.9 bits (84), Expect = 0.007
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Frame = +1
Query: 412 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA-------TDAEGSADSAAII 570
+ E + +K EE A E +K E++ + ++ EEK S T GSA + I
Sbjct: 260 ELETEVEVVKAEETAEATEQAKVELEGKLEDVIVEEKDSEINSKDEKTSESGSALCSEEI 319
Query: 571 PNMVKKIDLAPNVESDAAAVPEIKTSEAA--DAPKLADNPVDEDKPADIS 714
+ +++ + P E++ A I E A + + D P +E+KP++ S
Sbjct: 320 LSTIQESNTDPIKETEGDASYPIDVIEKAITEEKHVVDEPANEEKPSESS 369
>At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to SEC14-like protein 2
(Alpha-tocopherol associated protein) (TAP) (bTAP)
(Fragment) (SP:P58875) {Bos taurus}
Length = 683
Score = 36.3 bits (80), Expect = 0.022
Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Frame = +1
Query: 409 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA-----TDAEGSADSAAIIP 573
P E K + K EE + E+ KTE ++ AE +EEK +A T E + A I
Sbjct: 123 PVKEEKVEEKKTEETEEKKEEVKTEEKSLEAETKEEEKSAAPATVETKKEEILAAPAPIV 182
Query: 574 NMVKKID--LAP-NVESDAAA--VPEIKTSEAAD-APKLADNPVDED-KPADISPDAP-K 729
KK + +AP VE+ AA V E K E AP + V+E P + +P AP
Sbjct: 183 AETKKEETPVAPAPVETKPAAPVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAAPVT 242
Query: 730 AEAKSADDSA 759
E K + +A
Sbjct: 243 TETKEEEKAA 252
>At4g29060.1 68417.m04157 elongation factor Ts family protein
similar to SP|P35019 Elongation factor Ts (EF-Ts)
{Galdieria sulphuraria}; contains Pfam profiles PF00627:
UBA/TS-N domain, PF00889: Elongation factor TS, PF00575:
S1 RNA binding domain
Length = 953
Score = 35.9 bits (79), Expect = 0.030
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 25/135 (18%)
Frame = +1
Query: 409 PDAEAKSADIKVEEPAAQPED--------SKT------EVQATVAEISKEEKPSATDA-E 543
P+AEA +VEE P + S+T EV AT AE EK T+
Sbjct: 373 PEAEASVTSAEVEESVCVPAEVTSEEVPSSETPKVVEEEVIATKAEDDSPEKEEQTETLA 432
Query: 544 GSADSAAIIPNM--------VKKIDLAPNVESDAAAVPEIKTSEAADAPK-LADNPVDED 696
+A++ ++P + + + + PN +D + PE SE + + +A+ PVDE
Sbjct: 433 AAAEAEEVVPPIPETKSEEEIVENSIPPNSATDEVSSPEALASEEVEKEQVVAETPVDEV 492
Query: 697 K-PADISPDAPKAEA 738
K PA + +A E+
Sbjct: 493 KTPAPVVTEASSEES 507
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats, Pfam:PF00560;
contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 34.3 bits (75), Expect = 0.091
Identities = 26/120 (21%), Positives = 48/120 (40%)
Frame = +1
Query: 397 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 576
SSE S+ + P P + T VQA + P+ + + S A P
Sbjct: 696 SSEPTQVPTPSSSESYQAPNLSPVQAPTPVQAPTTSSETSQVPTPSSESNQSPSQAPTPI 755
Query: 577 MVKKIDLAPNVESDAAAVPEIKTSEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDS 756
+ PN + + P +SE +P+ ++ V+ +P ++P + + + S D S
Sbjct: 756 LEPVHAPTPNSKPVQSPTP---SSEPVSSPEQSEE-VEAPEPTPVNPSSVPSSSPSTDTS 811
>At1g34590.1 68414.m04299 hypothetical protein
Length = 820
Score = 33.1 bits (72), Expect = 0.21
Identities = 32/118 (27%), Positives = 45/118 (38%), Gaps = 1/118 (0%)
Frame = +1
Query: 406 IPDAEAKSADIKVEEPAAQPEDSKT-EVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 582
IPDA A D + P A PE S+ V A S DA ++ +IP+
Sbjct: 436 IPDAAAP-VDAGLISPRAAPEASRDGNVIPDAAAPVDAGLISLRDAPEASRDGNVIPDAA 494
Query: 583 KKIDLAPNVESDAAAVPEIKTSEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDS 756
+D AP+ +A P + SEA A ++D + D K K S
Sbjct: 495 APVDAAPSEAQEAE--PSVAASEAVVALPVSDTAAGKRVRVDDESSKKKKTKKKTSGS 550
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 535 DAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTSEAADAPKLA-DNPVDEDKPADI 711
DA D+ I P + NV DAAA + DAP+ + D V D A +
Sbjct: 438 DAAAPVDAGLISPRAAPEASRDGNVIPDAAAPVDAGLISLRDAPEASRDGNVIPDAAAPV 497
Query: 712 SPDAPKAEAKSADDSATTA 768
DA +EA+ A+ S +
Sbjct: 498 --DAAPSEAQEAEPSVAAS 514
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 32.7 bits (71), Expect = 0.28
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 2/155 (1%)
Frame = +1
Query: 280 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEA-KSADIKVEEPA 456
E+P PE K ++ P+ +I K EIP E K +I +
Sbjct: 110 ELPKFPEIPKPEL-PKMPEIPKPELPKVPEIQKPELP-KMPEIPKPELPKFPEIPKPDLP 167
Query: 457 AQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM-VKKIDLAPNVESDAAAVP 633
PE+SK EV + E K E P + IP + K+ P +E A VP
Sbjct: 168 KFPENSKPEVPKLM-ETEKPEAPKVPE----------IPKPELPKLPEVPKLE--APKVP 214
Query: 634 EIKTSEAADAPKLADNPVDEDKPADISPDAPKAEA 738
EI+ E P+L P + P+ PK EA
Sbjct: 215 EIQKPELPKMPELPKMPEIQKPELPKLPEVPKLEA 249
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 2/113 (1%)
Frame = +1
Query: 424 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPS-ATDAEGSADSAAIIPNMVKKIDLA 600
K K E+P +PE K E A ++ KP + + S+ P K +
Sbjct: 469 KQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPKPEESPKPEPP 528
Query: 601 PNVESDAAAVPEIKTSEAADAPKLADNPVDEDKPADI-SPDAPKAEAKSADDS 756
ES P+ +T + ++PK + KP + P PK E ++S
Sbjct: 529 KPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEES 581
>At5g26200.1 68418.m03118 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 342
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -2
Query: 215 LTESSILGATSRIG*AGTTSFSSATGIAKLTAAKA 111
+T+SS+ AT R+G + TTS + A G A LT+A A
Sbjct: 112 ITKSSVGQATVRLGLSDTTSLAVANGAAGLTSAVA 146
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 31.9 bits (69), Expect = 0.48
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 6/130 (4%)
Frame = +1
Query: 391 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQ------ATVAEISKEEKPSATDAEGSA 552
A SS+ E K K EE ++Q E + E + ++ E SKEE+P + E S+
Sbjct: 322 ASSSQDESKEEKPERKKKEESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEKEASS 381
Query: 553 DSAAIIPNMVKKIDLAPNVESDAAAVPEIKTSEAADAPKLADNPVDEDKPADISPDAPKA 732
N +K+ ++ ES + E K +E + + +K + +
Sbjct: 382 SQE---ENEIKETEIKEKEESSSQEGNENKETEKKSSESQRKENTNSEKKIEQVESTDSS 438
Query: 733 EAKSADDSAT 762
+ D+ T
Sbjct: 439 NTQKGDEQKT 448
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 31.9 bits (69), Expect = 0.48
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Frame = +1
Query: 466 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA--PNVESDAAAVPEI 639
ED+K ++ T + + EKPS A + K D+A N+E DA +
Sbjct: 3 EDTKATIEPTANKTTSLEKPSEAMAGKENAGGKETQELAKDEDMAEPDNMEIDAQIKKDD 62
Query: 640 KTSEAAD----APKLADNPVDE--DKPADISPDAPKAEAKSADDSA 759
+ +E D K DN + ++ +++ D +AEA + D+ A
Sbjct: 63 EKAETEDKESEVKKNEDNAETQKMEEKVEVTKDEGQAEATNMDEDA 108
>At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 31.9 bits (69), Expect = 0.48
Identities = 34/107 (31%), Positives = 45/107 (42%)
Frame = +1
Query: 403 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 582
E+ E ++K EEPA E +KTE T E KEE T +G A++
Sbjct: 133 EVKTKEIPVEEVKAEEPAKTEEPAKTE--GTSGE--KEEIVEET-KKGETPETAVVEE-- 185
Query: 583 KKIDLAPNVESDAAAVPEIKTSEAADAPKLADNPVDEDKPADISPDA 723
KK P VE K EA AP + + PV E + +P A
Sbjct: 186 KK----PEVEE--------KKEEATPAPAVVETPVKEPETTTTAPVA 220
>At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 31.9 bits (69), Expect = 0.48
Identities = 34/107 (31%), Positives = 45/107 (42%)
Frame = +1
Query: 403 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 582
E+ E ++K EEPA E +KTE T E KEE T +G A++
Sbjct: 133 EVKTKEIPVEEVKAEEPAKTEEPAKTE--GTSGE--KEEIVEET-KKGETPETAVVEE-- 185
Query: 583 KKIDLAPNVESDAAAVPEIKTSEAADAPKLADNPVDEDKPADISPDA 723
KK P VE K EA AP + + PV E + +P A
Sbjct: 186 KK----PEVEE--------KKEEATPAPAVVETPVKEPETTTTAPVA 220
>At3g49990.1 68416.m05466 expressed protein
Length = 502
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 406 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 543
+P A+ D+K E P A+P KT Q + E K+E+ +A AE
Sbjct: 422 LPGRRAEQTDVKAEIPKAEPIKRKTHGQESKEE--KKERKNAVKAE 465
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/88 (25%), Positives = 43/88 (48%)
Frame = +1
Query: 397 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 576
+ E+ EA+ D + E+ + +D KTEV + +EEK AE ++ A++
Sbjct: 57 NEEVVVEEAEKKDEETEKKTEE-KDEKTEVITETPVVEEEEK----KAEEVTETPAVVEE 111
Query: 577 MVKKIDLAPNVESDAAAVPEIKTSEAAD 660
KK ++ +++ AA E+ +A +
Sbjct: 112 -EKKTEVVEEKQTEVAAAEEVAVEKAEE 138
>At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to
DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579
[Arabidopsis thaliana]
Length = 1576
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Frame = +1
Query: 511 KEEKPSATDAEGSADSAAIIPNMVK-----KIDLAPNVESDAAAVPEIKTSEAA---DAP 666
K+E S + + ++ +I N+V +++AP ++ AA PE K S +
Sbjct: 1306 KKEPKSVSKLDLGSEKVSIPSNLVNGNEQHDLNIAPGEDASAAKQPEKKRSRSKKRKSGN 1365
Query: 667 KLADNPVDEDKPADISPDAPKAEAKSADD 753
L +++ KP+D++ + + E KSA++
Sbjct: 1366 NLDLGKMEKSKPSDLANENEQTEPKSANN 1394
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 403 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 582
E D + + +++VE+P+ + SK V+ + K+++PS A+GSA S +
Sbjct: 320 EKTDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPS---AKGSARSGEKSSKQI 376
Query: 583 KKIDLAP 603
K +P
Sbjct: 377 AKSTSSP 383
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Frame = +1
Query: 451 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI--DLAPNVESDAA 624
P++ PE+ ++ E+ PS++ S + P + +P S +
Sbjct: 71 PSSSPEEDSPLAPSSSPEVDSPLAPSSSPEVDSPQPPSSSPEADSPLPPSSSPEANSPQS 130
Query: 625 AVPEIKTSEAADAPKLADNPVDEDKPADIS-PDAPKAEAKSADDS 756
K AD+P P + P+ S P+ A S DDS
Sbjct: 131 PASSPKPESLADSPSPPPPPPQPESPSSPSYPEPAPVPAPSDDDS 175
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 280 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKV-EEPA 456
E P + E KKD+ AP ++ + K E+ + + + A + V EE
Sbjct: 73 ETPEVVEIKKDEEAPVETPVV---VEDESKTEEVVEAKKEEEVEEKKTEEAPVVVEEEKK 129
Query: 457 AQPEDSKTEVQATV-AEISKEEK 522
+ E+ K V+A+V A + K ++
Sbjct: 130 PEAEEEKPAVEASVTAPVEKADE 152
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +1
Query: 394 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 573
K+ E E + D + E+ + +D KTEV + +EEK AE ++ A++
Sbjct: 22 KTVEETVVETEKKDEETEKKTEE-KDEKTEVITETPVVEEEEK----KAEEVTETPAVVE 76
Query: 574 NMVKKIDLAPNVESDAAAVPEIKTSEAAD 660
KK ++ +++ AA E+ +A +
Sbjct: 77 E-EKKTEVVEEKQTEVAAAEEVAVEKAEE 104
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 29.1 bits (62), Expect = 3.4
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 22/147 (14%)
Frame = +1
Query: 394 KSSEIPDAEAKSADIKVEEPAAQPEDSKT--------EVQATVAEISKEEKPSATDAEGS 549
K + D+ +KS +VE+ A++PE K ++ A + +S+ + +
Sbjct: 137 KKKQKIDSSSKSKAKEVEKKASKPETEKNGKMGDIGGKIVAAASRMSERFRSKGNVDQKE 196
Query: 550 ADSAAIIPNMVKKIDLAPNVES---DAAAVPEIKTSEAADAPKL-----------ADNPV 687
A+ P M K+ + + D A +I TS PK+ A+N
Sbjct: 197 TSKASKKPKMSSKLTKRKHTDDQDEDEEAGDDIDTSSEEAKPKVLKSCNSNADEVAENSS 256
Query: 688 DEDKPADISPDAPKAEAKSADDSATTA 768
DED+P + + KA+ ++ T+
Sbjct: 257 DEDEPKVLKTNNSKADKDEDEEENETS 283
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +1
Query: 418 EAKSADIKVEE--PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI 591
E + ++KVEE PA + + +A E EEKP AE + + A+
Sbjct: 145 EETTTEVKVEEEKPAVPAAEEEKSSEAAPVETKSEEKPE-EKAEVTTEKASSAEE----- 198
Query: 592 DLAPNVESDAAAVPEIKTSEAADAPKLADN-PVDEDKPAD 708
D VE+ ++ + E+A AP + + V E +P +
Sbjct: 199 DGTKTVEAIEESIVSVSPPESAVAPVVVETVAVAEAEPVE 238
>At3g01700.1 68416.m00103 arabinogalactan-protein (AGP11) identical
to gi|10880499|gb|AAG24279
Length = 136
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 526 SATDAEGSAD-SAAIIPNMVKKIDLAPNVESDAAAVPEIKTSEAADAPKLADNPVDEDKP 702
S T A +A S+A P + P E D +A S++A+AP ++ P +
Sbjct: 35 SPTKAPAAAPKSSAAAPKASSPVAEEPTPEDDYSAA---SPSDSAEAPTVSSPPAPTPEA 91
Query: 703 ADISPDAPKAEAKSADDS 756
S D P ++ +A +S
Sbjct: 92 DGPSSDGPSSDGPAAAES 109
>At2g45800.1 68415.m05696 LIM domain-containing protein similar to
PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain
protein PLIM1 [Nicotiana tabacum] GI:5932418; contains
Pfam profile PF00412: LIM domain
Length = 226
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 277 DEVPAIPEAKKDDIAPE 327
D+ +IPEAK+DD APE
Sbjct: 197 DDTASIPEAKEDDAAPE 213
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +1
Query: 445 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAA 624
EE + ++K + +++ E SK+ + T+ + +S++ M K+ + VES +
Sbjct: 426 EESKGKESETKDKEESSSQEESKDRE---TETKEKEESSSQEETMDKETEAKEKVESSSQ 482
Query: 625 AVPEIKTSEAADAPKLAD--NPVDEDKPADISPDAPKAEAKSAD 750
E K +E ++ L + DE K + S K E K +
Sbjct: 483 EKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETE 526
>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1158
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 3/117 (2%)
Frame = +1
Query: 418 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATD---AEGSADSAAIIPNMVKK 588
E ADI++ + ++ D+ +A +E + +PS D E + +S + V +
Sbjct: 735 EIADADIEMVDNPSEARDASASTEANGSESEETYEPSDGDTAHVEAAGESKLV---TVME 791
Query: 589 IDLAPNVESDAAAVPEIKTSEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSA 759
+++ SD + E+ T D D V ++P + + D A
Sbjct: 792 VEIPEKTHSD--VIRELDTKAVGDLAAATDLEVVMEEPCIVEGSVETEDPNPGSDEA 846
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = +1
Query: 391 AKSSEIPDAEAKSADIKVEEPAAQPED-------SKTEVQATVAEISKEEKPSATDAEGS 549
A E P AE ++ VEE AAQPE + E + A K++K + E
Sbjct: 308 AALGETPAAERPASSTPVEEKAAQPEPVAPVENAGEKEGEEETAAAKKKKKKKEKEKEKK 367
Query: 550 ADSAAIIPNMVK 585
A +AA + V+
Sbjct: 368 AAAAAAATSSVE 379
>At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containing
protein low similarity to CRP1 [Zea mays] GI:3289002;
contains Pfam profile PF01535: PPR repeat
Length = 793
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 413 MLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQKKKNL 526
M K+N+ + K+K ++L LK K YK + K Q + L
Sbjct: 740 MEKKNMFVDKYKYRMLFLKYHKTAYKGKAPKVQSESQL 777
>At5g24590.2 68418.m02905 turnip crinkle virus-interacting protein /
TCV-interacting protein (TIP) contains Pfam PF02365: No
apical meristem (NAM) domain; similar to NAC2
(GI:6456751) {Arabidopsis thaliana}; identical to cDNA
TIP mRNA, GI:9408600
Length = 451
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +1
Query: 505 ISKEEKPSATDAEG--SADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTSEAADAPKLAD 678
I E + + D +G S + ++ + KK D+ + AA PE S + +
Sbjct: 135 IMHEYRATEKDLDGTKSGQNPFVVCKLFKKQDIV-----NGAAEPEESKSCEVEPAVSSP 189
Query: 679 NPVDEDKPADISPDAPKAEAKSADDSATTA 768
VDE + +++SP PK E + D A ++
Sbjct: 190 TVVDEVEMSEVSPVFPKTEETNPCDVAESS 219
>At2g02170.1 68415.m00153 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 486
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 412 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA 561
+AE K ++KVE + +D + AT+ E EEK +A +A+ +A
Sbjct: 411 EAEMKKTEVKVERIKGRAQDRLMKKLATI-ERKAEEKRAAAEAKKDHQAA 459
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
Frame = +1
Query: 409 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 588
P A++ S + EP+ P DS+ ++ + P +D+ DS P
Sbjct: 42 PPADSSSTP-PLSEPSTPPPDSQLPPLPSILPPLTDSPPPPSDSSPPVDSTPSPPPPTSN 100
Query: 589 IDLAPNVESDAAAVPEIKTSEAADAPKL-ADNPVDEDKPADISPDAPKA 732
+P +S+ P ++++ P +P ++ P P++
Sbjct: 101 ESPSPPEDSETPPAPPNESNDNNPPPSQDLQSPPPSSPSPNVGPTNPES 149
>At1g04810.1 68414.m00477 26S proteasome regulatory subunit, putative
contains similarity to 26S proteasome regulatory subunit
S1 SP:O88761, GI:3288594 from [Rattus norvegicus]
Length = 1001
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 601 PNVESDAAAVPEIKTSEAADAPKLADNPVDEDKPADISPDAPKAEAKSADDSATT 765
P +A + K + A+ A+N +E A+ + D +AE+ D +ATT
Sbjct: 839 PTAVLSTSAKAKAKAKKEAEQKAKAENSGNEAGKANAASDEKEAESMQVDSTATT 893
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.306 0.123 0.330
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,114,493
Number of Sequences: 28952
Number of extensions: 199671
Number of successful extensions: 578
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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