Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1030
         (740 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DAG6 Cluster: Chromosome undetermined scaffold_43, wh...    37   0.60 
UniRef50_Q8ID54 Cluster: UBA/THIF-type NAD/FAD binding protein, ...    33   7.4  
UniRef50_Q6MTN7 Cluster: Putative uncharacterized protein; n=1; ...    33   9.7  
UniRef50_O96160 Cluster: 41 kDa antigen; n=3; Plasmodium|Rep: 41...    33   9.7  

>UniRef50_A0DAG6 Cluster: Chromosome undetermined scaffold_43, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_43,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 359

 Score = 36.7 bits (81), Expect = 0.60
 Identities = 18/56 (32%), Positives = 33/56 (58%)
 Frame = -1

Query: 665 KERYFVVYNIIYISRKLTVYIIKFINNTELYSVNRLQWSAFDRYELFNSILNFTEE 498
           KE+YF+++ I  I+ KL +   + +    L+ + + QW  F++    +SILN +EE
Sbjct: 72  KEKYFLIWCITKITEKLQIKFHELVMPFLLFIIVQYQWKVFEK---LSSILNLSEE 124


>UniRef50_Q8ID54 Cluster: UBA/THIF-type NAD/FAD binding protein,
           putative; n=1; Plasmodium falciparum 3D7|Rep:
           UBA/THIF-type NAD/FAD binding protein, putative -
           Plasmodium falciparum (isolate 3D7)
          Length = 584

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -1

Query: 620 KLTVYIIKFINNTELYSV-NRLQWSAFDRYELFNSILNFTEESVHIFIKYFN 468
           ++ +  ++ INNT +Y + N ++WS ++  E FN + +   E + I I   N
Sbjct: 439 QICILDVRKINNTNIYGLRNSVKWSFYEIIETFNKLQHNKHELLQIIIDKLN 490


>UniRef50_Q6MTN7 Cluster: Putative uncharacterized protein; n=1;
           Mycoplasma mycoides subsp. mycoides SC|Rep: Putative
           uncharacterized protein - Mycoplasma mycoides subsp.
           mycoides SC
          Length = 169

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = -1

Query: 656 YFVVYNIIYISRKLTVYIIKFINNTELYSVNRLQWSAFDRYELFNSI 516
           Y++  + IY  + L +Y  KFI+N  L + N+LQ   FDRY + N +
Sbjct: 52  YYLPNSGIYYKKILDLYKPKFIHN--LANNNKLQMVIFDRYNIKNKL 96


>UniRef50_O96160 Cluster: 41 kDa antigen; n=3; Plasmodium|Rep: 41
           kDa antigen - Plasmodium falciparum (isolate 3D7)
          Length = 1712

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 18/84 (21%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = -1

Query: 716 NSRKIHVTQKNNLCR*LKERYFVVYNIIYISRKLTVYIIKFINNTELYSVNRLQWSAFDR 537
           N+ ++ V Q NN  +  +E  +   N  Y++ K  V++ K++NN+ +  +  +       
Sbjct: 68  NNIQVRVNQNNNEEKKKEEANYTCVNNKYVTLKNKVHVNKYVNNSNINKIKIVPIIKCSN 127

Query: 536 YELFNSILNFTEESV-HIFIKYFN 468
           Y++ N+ ++  + +  + F+K  N
Sbjct: 128 YKIKNNPISHLKSNYENKFVKLSN 151


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,391,068
Number of Sequences: 1657284
Number of extensions: 12828377
Number of successful extensions: 23946
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23935
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)