Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1026
         (751 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0660 - 19286653-19287271,19287791-19287916,19288016-192882...    29   3.0  
01_03_0316 + 14966231-14966570,14967596-14967738                       28   6.9  
12_01_0790 + 7216452-7216489,7216664-7216722,7217268-7218750,721...    28   9.1  

>09_04_0660 -
           19286653-19287271,19287791-19287916,19288016-19288221,
           19288417-19288549,19288632-19288713,19288906-19289035,
           19289187-19289279,19289391-19289510,19289594-19289660,
           19290079-19290137,19290719-19290943
          Length = 619

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 689 CSSTCPGETGKASGPPV 739
           C+STCPG +G  SGP +
Sbjct: 95  CASTCPGPSGSDSGPVI 111


>01_03_0316 + 14966231-14966570,14967596-14967738
          Length = 160

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 751 MMKDYWWPRGLSSFTRTGGRAKAQPGGVGFANNCPSALGTYIAKTCQRAHGSSGVKWLPG 572
           +M+  W     ++  R  G      GG G A    +A G Y A +  R++G+ G  WL G
Sbjct: 76  VMEWRWRDETATARQRRHGAQGDATGGSGDATAGGAARGCYTAASGGRSNGNGGGGWLHG 135


>12_01_0790 +
           7216452-7216489,7216664-7216722,7217268-7218750,
           7218828-7218892,7219023-7219080,7219152-7219262,
           7219332-7219410,7219521-7219613,7219701-7219886
          Length = 723

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -3

Query: 269 TYKK*DIYLSFIDHDLRAFVCAIRNIIW 186
           TYKK D Y   ID   RA  C   NI W
Sbjct: 110 TYKKRDRYKEEIDSQARAAACDECNIYW 137


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,059,834
Number of Sequences: 37544
Number of extensions: 427022
Number of successful extensions: 905
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)