Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1025
         (470 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   5.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   5.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 264 GAVAVVTIPEILELISRGGWRI 329
           G   ++   EI+EL   GGW++
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 9   CIRVEAMHRCSNPAGGY 59
           C  + A H+C+ P G Y
Sbjct: 353 CTTIHAGHKCTCPEGFY 369


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -3

Query: 174 SDYANYNFAGLIFITRCYSFTVEVNREHLLSTYFIRKIGTRLR 46
           SDY N + A   F+ R     + +   HL     I K  ++ R
Sbjct: 413 SDYQNKSLAAFDFVARNSDTPIILWTSHLTQADVIEKYLSKAR 455


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 304 SSKISGIVTTATAPFEP 254
           S K SG+++T T+P  P
Sbjct: 121 SGKPSGVISTNTSPPSP 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,088
Number of Sequences: 336
Number of extensions: 2533
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)