Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1024
(644 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26157| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 7e-14
SB_48146| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_8599| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_25710| Best HMM Match : Homeobox (HMM E-Value=4.8e-17) 56 3e-08
SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_48109| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_8063| Best HMM Match : Homeobox (HMM E-Value=8.5e-24) 35 0.049
SB_37035| Best HMM Match : Homeobox (HMM E-Value=9.6e-09) 33 0.20
SB_46456| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_44805| Best HMM Match : Col_cuticle_N (HMM E-Value=2.7) 32 0.35
SB_32587| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_16484| Best HMM Match : MSG (HMM E-Value=0.24) 31 0.61
SB_5797| Best HMM Match : PH (HMM E-Value=3.7e-37) 31 0.61
SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_25008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_22738| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_35064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_14693| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_805| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_41749| Best HMM Match : Homeobox (HMM E-Value=4.1e-29) 28 7.5
SB_21839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_59661| Best HMM Match : PMP22_Claudin (HMM E-Value=0.26) 28 7.5
SB_51862| Best HMM Match : ETS_PEA3_N (HMM E-Value=5.5) 28 7.5
SB_40429| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0036) 28 7.5
SB_28679| Best HMM Match : RVT_1 (HMM E-Value=9.3e-08) 28 7.5
SB_19953| Best HMM Match : Trehalase (HMM E-Value=0.66) 28 7.5
SB_17726| Best HMM Match : Casein (HMM E-Value=5) 27 9.9
SB_39017| Best HMM Match : Treacle (HMM E-Value=1.7) 27 9.9
SB_6168| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_26157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1097
Score = 74.5 bits (175), Expect = 7e-14
Identities = 31/63 (49%), Positives = 46/63 (73%)
Frame = +2
Query: 452 RKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILP 631
+ +RG L K + I+K WL+ H + YP++ EK +++Q+ NL++LQV NWFINARRRIL
Sbjct: 949 KSKRGVLPKQATSIMKTWLFQHIMHPYPTEDEKRSIAQQTNLTILQVNNWFINARRRILQ 1008
Query: 632 EMI 640
M+
Sbjct: 1009 PML 1011
>SB_48146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 810
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +2
Query: 452 RKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILP 631
+K+RG K + I+K WL+ H + YPS+ +K +L+QE L++LQV NWFINARRRI+
Sbjct: 297 QKKRGIFPKAATNIMKAWLFQHLTHPYPSEEQKRSLAQETGLTILQVNNWFINARRRIVQ 356
Query: 632 EMI 640
MI
Sbjct: 357 PMI 359
>SB_8599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = +2
Query: 458 RRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILPE 634
RR N + + LK WL++HR N YP+ EKI L+ +++ QV WF NARRR+ E
Sbjct: 157 RRKNATRETTSTLKAWLFEHRKNPYPTKGEKIMLAILTKMTLTQVSTWFANARRRLKKE 215
>SB_25710| Best HMM Match : Homeobox (HMM E-Value=4.8e-17)
Length = 108
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +2
Query: 452 RKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 622
RKRR N +K + +IL + Y H N YPS+ K L+++ N+SV Q+ NWF N R R
Sbjct: 2 RKRR-NFSKQATEILNEYFYSHLSNPYPSEEAKEELARKCNISVAQISNWFGNKRIR 57
>SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +2
Query: 455 KRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRI 625
+++ L K + +IL+ WL D+ YP K L Q LS QV WF NARRR+
Sbjct: 137 RQKSTLPKEATRILQSWLNDNLEKPYPDAETKERLQQLTQLSKTQVNTWFANARRRL 193
>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2250
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 515 HRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 622
+ N YP+ EK ++++ NL++ QV NWF N R+R
Sbjct: 153 YEQNKYPTPQEKRLIAKQTNLTLKQVSNWFKNRRQR 188
>SB_48109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 530 YPSDAEKIALSQEANLSVLQVCNWFINARRRILPEMIR 643
YP+ EK L++ +L+V QV NWF N R+R+ IR
Sbjct: 203 YPTPREKHELAKMTDLTVTQVSNWFKNKRQRVRAAEIR 240
>SB_8063| Best HMM Match : Homeobox (HMM E-Value=8.5e-24)
Length = 963
Score = 35.1 bits (77), Expect = 0.049
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Frame = +2
Query: 236 RDVRELTREIIRDARVANR---QQSSSPGVRN-RFPS--TSSTDENE---SGTDGEADRS 388
RD+ +L + IR + +++ + S+SP R PS T ENE S D + +
Sbjct: 7 RDILDLPEDAIRSMQHSDKNLMEPSTSPNHHETRTPSEITEQESENEVSASSPDQDLTLT 66
Query: 389 RRQTILHGVSGMQPQGQIVTI----RKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIA 556
R + + + P+ + ++ RKRR K IL+R RY + P E+
Sbjct: 67 RISPPVDEKNEIAPRKEPLSEPPKKRKRRILFTKAQTFILERRFTQQRYLSAP---EREE 123
Query: 557 LSQEANLSVLQVCNWFINARRRILPEM 637
L++ ANL+ QV WF N R + +M
Sbjct: 124 LARIANLTPAQVKIWFQNHRYKYRKQM 150
>SB_37035| Best HMM Match : Homeobox (HMM E-Value=9.6e-09)
Length = 243
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 491 ILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 622
+L+ W + + YP+ +K L+Q L+ QV NWF N R+R
Sbjct: 143 LLREW---YLQDPYPNPTKKRELAQATGLTPTQVGNWFKNRRQR 183
>SB_46456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 576 KLASWLSAIFSASLGYALYLWSYSHRFNIFTECLARFP 463
K+ LSA GY+L L++YSH I +CL FP
Sbjct: 337 KVTKGLSAGNKDISGYSLKLYAYSHSIGICGDCLNNFP 374
>SB_44805| Best HMM Match : Col_cuticle_N (HMM E-Value=2.7)
Length = 251
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 269 RDARVANRQQSSSPGVRNRFPSTSSTDENES-GTDGEADRSRRQTILHGVSGMQPQGQIV 445
RDAR + +QSSS + S D E + EA+ IL+ GM + +I+
Sbjct: 159 RDARKLSVEQSSSTSEQTAEKKQSPFDVYEFLRAEDEAEVEEFNDILYEYFGMNARVEII 218
Query: 446 T-IRKRRGNLAK 478
T R+R+GN AK
Sbjct: 219 TSSRRRKGNNAK 230
>SB_32587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 32.3 bits (70), Expect = 0.35
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +2
Query: 317 RNRFPSTSSTDENESGTDGEADRSRRQTIL--HGVSGMQPQGQIVTIRKRRGNLAKHSVK 490
RN S EN + T+GE+ R + + V G PQ + T K R + +
Sbjct: 23 RNTSAQRSPQAEN-TATNGESQRKQIYPWMTEFRVKGPPPQTKECTSDKNRTIYSTRQLV 81
Query: 491 ILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 622
L++ + YN Y +I ++Q L+ QV WF N R +
Sbjct: 82 ELEK---EFHYNRYLCRPRRIEIAQSLELTEKQVKIWFQNRRMK 122
>SB_16484| Best HMM Match : MSG (HMM E-Value=0.24)
Length = 661
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/77 (23%), Positives = 30/77 (38%)
Frame = -2
Query: 643 TYHLRQDATSRVYKPVTYLQDTQIGLLAERYFLGXXXXXXXXXXVQPSLQYLHRMLGEVP 464
TYH + T + +P Y++ + Y++ +P Y+ ++ P
Sbjct: 585 TYHYMRQHTYYMRQPTYYMRQPTYYMRQPTYYMRQHTHYMRQHLRRPR-HYMRQLYTHYP 643
Query: 463 STFPYCHYLTLGLHAGD 413
ST P C L L GD
Sbjct: 644 STMPQCMMPILSLLTGD 660
>SB_5797| Best HMM Match : PH (HMM E-Value=3.7e-37)
Length = 1481
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 224 FQHRRDVRELTREIIRDARVANRQQSSSPGVRNRFPSTSSTDENESGTD 370
F HRR E + + + + +S+P R F STS++ ++ES TD
Sbjct: 707 FAHRRSQSETLSQTVSLSSATSFTSTSAPEKRKSFISTSASTDSESFTD 755
>SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 248 ELTREIIRDARVANRQQSSSPGVRNRFPSTSSTDENESGTDGEADRSRRQTILHGVSGMQ 427
++ RE I +N + +++ R F S +N S T + ++ +T L V+G
Sbjct: 168 DIKREDILPIVDSNSKMNTALHKRALFESPEKR-QNSSETASDVSLTKVKTKLVKVNGRT 226
Query: 428 -PQGQIVTIRKRRGNLAKHSVKILKRWLYDHRYNAY 532
PQG + T+ KRRG K + LK+ + R +++
Sbjct: 227 LPQGCVNTVVKRRGRKPKDPSQKLKKSPWRKRKDSF 262
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 476 KHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSV 583
K S + L W+ ++R++AY D KI + + +L +
Sbjct: 132 KCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDLGL 167
>SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3610
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/90 (22%), Positives = 38/90 (42%)
Frame = +2
Query: 281 VANRQQSSSPGVRNRFPSTSSTDENESGTDGEADRSRRQTILHGVSGMQPQGQIVTIRKR 460
+++R+ S+ + S+SS+ E S Q++ G G + I I
Sbjct: 3140 LSSRRWSNGSAFGSSSSSSSSSGTRSEFGGSEFSNSSHQSVRRGQYGDDLKRNIERIVVS 3199
Query: 461 RGNLAKHSVKILKRWLYDHRYNAYPSDAEK 550
+G + + + + DHRYN Y D ++
Sbjct: 3200 QGPNSTKAKSDFEGCVSDHRYNGYHMDKDR 3229
>SB_25008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 455 KRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINAR 616
+ R + + +K L+ + + RY S E+ L+Q ++ LQV NWF N R
Sbjct: 155 RTRTHFTERQLKYLETYYSNGRYL---SRDERTVLAQALEMTELQVRNWFQNRR 205
>SB_22738| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +2
Query: 461 RGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFIN 610
R N + ++ + WL ++ +PS + + + NL+ + C+ FIN
Sbjct: 124 RTNKLNNDLENICEWLTANKLQFHPSKTKSMIIGSSYNLAKIDQCSVFIN 173
>SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 28.3 bits (60), Expect = 5.7
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 3/123 (2%)
Frame = +2
Query: 281 VANRQQSSSPGVRNRFPSTSSTDEN---ESGTDGEADRSRRQTILHGVSGMQPQGQIVTI 451
++N + SP + S TD+ E G D E D R P+ + +
Sbjct: 497 ISNILELESPEEAGKVSSDDYTDQETFEEKGDDEEFDNDPR-----------PEDRELPC 545
Query: 452 RKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILP 631
K R + + +V R YP + L+Q LS +V WF N R R+
Sbjct: 546 HKPRRSRTRFTVSQTDELERAFRKTHYPDIYAREELAQRLGLSEARVQVWFSNRRARLRK 605
Query: 632 EMI 640
E +
Sbjct: 606 ERL 608
>SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1951
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 206 DRTEMAFQHRRDVRELTREIIRDARVANRQQSSS 307
++TE+ +H RD EL + + A V N Q +S
Sbjct: 418 EKTEIERKHTRDKAELVTNLAKQANVLNNQTENS 451
>SB_35064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.3 bits (60), Expect = 5.7
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Frame = +2
Query: 173 PPTAGLSQEQRDRTEMAFQHRRDVRELTREIIRDARVANRQQSSSPGVRNRFPSTSSTDE 352
PP LS D+ RRD + I+ D + +S+ P + P+ + D
Sbjct: 84 PPENTLSSSDDDKEGAKGPKRRDQADRLSHIVEDKEIKEFLKSTQPYLNEGNPNENVPDP 143
Query: 353 NESG-TDG-EADRSRRQTILHGVSGMQPQ------GQIVTIRKRRGNLAKHS 484
E D EAD + + V+ P+ G + + + LAKH+
Sbjct: 144 GEDAFFDALEADIEDEEAVCEAVNDRIPKIAKKLWGSSIAADRLKTLLAKHA 195
>SB_14693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 452 RKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 622
+ RR + V L+R H+Y S E+ +++ N+S QV NWF N R +
Sbjct: 80 KPRRSFFSADQVNQLERVFAAHQY---VSANERAEIAETLNMSDDQVKNWFQNRRMK 133
>SB_805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1270
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +2
Query: 203 RDRTEMAFQHRRDVRELTREIIRDARVA--NRQQSSSPGVRNRFPSTSSTDENESGTDGE 376
RDR + RD E +R +RD A NR + RNR + N E
Sbjct: 945 RDRHKALCNRLRDRHEASRNRLRDRHEASRNRLRDRHEASRNRLRNRHEASRNRLRDRHE 1004
Query: 377 ADRSR 391
A R+R
Sbjct: 1005 ASRNR 1009
>SB_41749| Best HMM Match : Homeobox (HMM E-Value=4.1e-29)
Length = 269
Score = 27.9 bits (59), Expect = 7.5
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +2
Query: 332 STSSTDENESGTDGEADRSRRQTILHGVSGMQPQGQIVTIRKRRGNLAKHSVKILKR-WL 508
STS +E T + ++S+R+ + P+ ++ R K + ++R +L
Sbjct: 40 STSKDEETPRSTPVKPEKSKRKR-----ASPDPEEGSDGGKRYRATFDKAQIFQMERVFL 94
Query: 509 YDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 622
+H YP A + LS+ LS QV WF N R +
Sbjct: 95 LNH----YPDVAARSELSRRTGLSESQVQIWFQNRRAK 128
>SB_21839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 200 QRDRTEMAF-QHRRDVRELTREIIRDARVANRQQSSSPGVRNRFPSTSSTD 349
+R+ +AF + R+ +RE+ + RDA RQQ S G + P S D
Sbjct: 177 EREVKRLAFVEERKKMREVEKRE-RDAEETRRQQVSRVGQEGKKPDESEAD 226
>SB_59661| Best HMM Match : PMP22_Claudin (HMM E-Value=0.26)
Length = 680
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 512 DHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRI 625
+H + + K+ N +VL VCN IN RR+
Sbjct: 623 EHNFPRFMKPVTKVFTHLPCNTNVLSVCNCVINGFRRL 660
>SB_51862| Best HMM Match : ETS_PEA3_N (HMM E-Value=5.5)
Length = 312
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +2
Query: 191 SQEQRDRTEMAFQHRRDVRELTR---EIIRDARVANRQQSSSPG---VRNRFPSTSSTDE 352
SQ++ ++T + D R + R +I+R ++ +S V+N P+ SS DE
Sbjct: 13 SQKEMNKTNKISPQKPDTRRIDRNFRDIVRYCDFKEKEDKNSKRFQEVKNYQPAKSSPDE 72
Query: 353 NESGT 367
+ SGT
Sbjct: 73 HFSGT 77
>SB_40429| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0036)
Length = 311
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 505 PSLQYLHRMLGEVPSTFPYCHYLTLG 428
P L+YLH L + +++P C + LG
Sbjct: 113 PMLEYLHSCLSTIEASYPGCGTILLG 138
>SB_28679| Best HMM Match : RVT_1 (HMM E-Value=9.3e-08)
Length = 948
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 505 PSLQYLHRMLGEVPSTFPYCHYLTLG 428
P L+YLH L + +++P C + LG
Sbjct: 118 PMLEYLHSCLSTIEASYPGCGTILLG 143
>SB_19953| Best HMM Match : Trehalase (HMM E-Value=0.66)
Length = 1097
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 505 PSLQYLHRMLGEVPSTFPYCHYLTLG 428
P L+YLH L + +++P C + LG
Sbjct: 107 PMLEYLHSCLSTIEASYPGCGTILLG 132
>SB_17726| Best HMM Match : Casein (HMM E-Value=5)
Length = 181
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = -2
Query: 622 ATSRVYKPVTYLQDTQIGLLAERYFLGXXXXXXXXXXVQPSLQYLHRMLGEVPSTFPYCH 443
A++ V+ P L T+ +L ++Y +P + L E+ PY
Sbjct: 75 ASAPVFSPSCVLTVTEKLVLIQKYLQQLQYPYPPTVNCEPIYNHTGTQLFEIKKYRPYTG 134
Query: 442 YLTLGLHA 419
++ LG+HA
Sbjct: 135 HVVLGVHA 142
>SB_39017| Best HMM Match : Treacle (HMM E-Value=1.7)
Length = 415
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +2
Query: 245 RELTREIIRDARVANRQQSSSPG-VRNR-FPSTSSTDENESGTDGEADRSRRQTILHGVS 418
R +E D A R S + G VR R F + E+ +GT+ + T +
Sbjct: 272 RTTKKETSGDGNTATRISSGTTGKVRVRTFKGPHRSKEDSNGTNTKETSGDGDTATRIGT 331
Query: 419 GMQPQGQIVTIRKRRGNLAK 478
G +GQ+ TI+ G+ AK
Sbjct: 332 GATGKGQVRTIKGPDGSKAK 351
>SB_6168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 539 DAEKIALSQEANLSVLQVCNWFINARRR 622
D +K A+++E L + V N+F+NARRR
Sbjct: 371 DMQK-AVAEELGLDLNSVANFFMNARRR 397
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,835,862
Number of Sequences: 59808
Number of extensions: 445904
Number of successful extensions: 1828
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1826
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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